XLOC_022060 (gene) - C. hemisphaerica

Overview
NameXLOC_022060
Unique NameXLOC_022060
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001601:43151..49798+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022060 ID=XLOC_022060|Name=XLOC_022060|organism=Clytia hemisphaerica|type=gene|length=6648bp|location=Sequence derived from alignment at sc0001601:43151..49798+ (Clytia hemisphaerica)
GCGCTTGAAAGGTAAGCGTATGCTCGGACACACTTTTGTAACATTTCAGG GTCGTACTCAGTCCCCTAACTCGCTTTTTATGATTTCAGAGTTCTCACGA TTGTATCACGTGGATTAGTAAATTAAATAAGTGATCAAATGGTTCTGGGT TATGAGTTTTGCGATTAaggaaaaaacctttgaaaatgagCTCTGAAATG AAACTTTGTTGTTCTTTCTTTAAATTAACTGttggaatggcaaaatttca aaaagaactcTTCTGAATTCTATAAGTCAACTCTTTTAAGGATTTTAAGC AGAATTTAGCCGATTGGGATGGTATACGCCATAATCACCCTATTTCGTTA CATTCGTGTTTATATACATGATTTCTTtttacgtcactgcagtaatcaac tttttatgatttttttctctgtTGTGAATTGGGATATGAGTATGGGAAAT AATTGGAAAAgagttcttgaattcccaagtAATTCCAAAAATTATAACGA AGAAACAAATTTTATGATGAATGTCttcttaaagaaaaactttcacaTCT TTGAACAGTTTCTTTCtgcaaattgaattgaaaatccTATCCTATGAAAT AAGCTAACGAATCAATTGCTAAGGTTTCCTTCACCACAGTCACCACCTTG AGAATAATTTCTCCTCATTTAAAGATTTGTATCTTCTTTCTCAATTTAGG GAAGTACTTGCACGCGGAAAGTTTCCCGAGAGGTTTTCTTGTCTTTTCCA TGGATATTTAGCAAATAATTCGGGCATCGATTTGGGAACACATCCAACAG AATTTCCTGATGACCAAATGTATCTGATCACTTGGTTTGATGGAGTTGCC AAGGAAGCATTGTTGAATAATCGACCACCTACCCATCCAGCTCACATCAA GTCGATGATCCATCAACTTGCTGAGGGTCTGGCNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCATCCAACAGAATTTCCTGATGACCAAATGTATCTGATCACTTGGTTTG ATGGAGTTGCCAAGGAAGCATTGTTGAATAATCGACCACCTACCCATCCA GCTCACATCAAGTCGATGATCCATCAACTTGCTGAGGGTCTGGCAAGCct cgaatttctttttgatGGAGAGATTCGGAGTTTGCATCCTACGAATATTG TTATTCAAACGGTAATCACCaaatctttatatttttgaCCTCGAATTTGA GCTTGGACTAGCCACAAAATTACAGTCTATTGAAAATAGGAAATGACTAC ATATAtgtattaatttttttctttgcaaacaGGTGCCGAGGGATGACACA CACATGGAGTTTCAGGGGATTCCTAAGTCCGATATCAGGGTTTCTGTGCT GGACTTCTCCTGCATGCGACATGAAATACACGATGATGATTTTGTTGTCC ACGAGGGCGTTCATTGCAACGACCTGTACGCTCTTTTTGCGGACTTGTTT GAAGAGGATGAGGATGATAATAATGGGTTTCGTTATCTGCTTGAAGAAAC GCATAAAGCTCTCCAGTAagattttctttcactttttattCATTGTCACA AAGATCTGAACTCTCTGGTTATTTTAACAATCTAGCCACTCGGCTATTTG GTAGAAATGATAAGtcggaaaaaattttcaacaagcACCCCCTCAAACAA ACGCCCCTTTCAAATAAATGCTTTCTCTCTAGGAGGGGCtttatttgaaa taaatgaCTGCGAGGGAGAATTATATGGAGGAAAACTTCatgaaaaactt caaactttcaaacttcAATATGTGTTAATGATTGTATTCTTTCAGTGTTC AAACTCATTTTGACCTATTTTCACATGACATATTTTAACTGAAAGAAAGC GAAAAGGCAAATCAAGGTCCTCATTTACTTTACTAAAATGACCTTGGTTA AAGATTattcaataaacgcccccttctttaaaaaacgccTAGGGCCGTTA TTCGAAATAATACGGTTTTCATATTTGCCAAGTACATTGTGAGTTTTAAA TTTATGATGATTTTACgacagatttttattttctttacagAGGTGATTGG ACGAGGAATAAGCCTTGTACGAATATCCTTTGGCTGTACTGGCTCCTGAC GCTTTTTCccgagaagaagaagaaggagctgtCCAGTTTGGCTGCACGTA TCGCCGACTGTCGCAGTGCAACTGAATTGTTTGAAAGTCTCACGCCTTAA GTGTAACATTGTGCATGGTAAATTCTCTCTCCAAATTACGAGGATAAAAT TCTCAGCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTTTTAACAATCTAGCCACTCGGCTATTTGGTAG AAATGAtaagtcggaaaaattttcaacaaatacCCCCTCAAACAAACGTC CCTTTCGAATAAACGCTTTCTCTCTAGGAGGGGCTTTATTTGAAACAAAT GACTGCGAGGGAGAATTATATGGAGGAGAACTTCatgaaaaacttcaaac tttcaaacttcAATATGTGTTAATGATTGTATTCTTTCAGTGTTCAAACT CATTTTGACCTATTTTCACATGACATATTTTAACTGAAAGAAAGCGAAAA GGCAAATCAAGGTCCTCATTTACTTTACTAAAATGACCTTGGTTAAAGAT TattcaataaacgcccccttctttaaaaaacgccTAGGGCCGTTATTCGA AATAATACGGTTTTCATATTTGCCAAGTACATTGTGAGTTTTAAATTTAT GATGATTTTACgacagatttttattttctttacagAGGTGATTGGACGAG GAATAAGCCTTGTACGAATATCCTTTGGCTGTACTGGCTCCTGACGCTTT TTCccgagaagaagaagaaggagctgtCCAGTTTGGCTGCACGTATCGCC GACTGTCGCAGTGCAACTGAATTGTTTGAAAGTCTCACGCCTTAAGTGTA ACATTGTGCATGGTAAATTCTCTCTCCAAATTACGAGGATAAAATTCTCA GCTATAGGCCTTTACTCCCTTGAACTGAAAATCAATTTCATACCATGATA TGAAATAAATTAGTTGGGCCGAGTTTTCTTCAAACTCACTTGAGTTTAAA GGTGTCactatttcatgattttttttcgatacCTTTCTTTCTTATTAGAC TTTATGCTGATAAGCTCTCCCTTTACAAAATCATTTAAATATGAGGTGGT AAATTTCCTTCGCAACCACTCATTTCTTTGTGGTGTCGAGTTCTCTCTTT ATTCCTttaacataaacttttttggATAGATTTGGGATTTCTTCAACGTC AAGTATCCCACTAAAGATCCCTAAAGTTATTCTGTTATATATCGCCTTTC TAATGTATATCCTACACTATAATTTAAATTTCCTTTGGATTTTACCAACA TGGTATGAAGTGTTGTTTTAGTTATGGAAACTCCATATCACACCCCTCTT TTCTCTGGAAAATACACTTTCCTTAAATATAAAGTGGTTTGGGTTGTGGT TGACTATTTCTTTATTAGACCATTTGAATTCTAACCGCATTCCGAGAcaa aaaaagtacaaatttttattcaaacatattgaaagaattttttacCTTGG TGGAGCACTCCCATGTAAGAGAGAATGTTTTACGTTCAATGATGTATTAG TAGATTTATCAATGTTAGCTGTAACGTCACCAGGTTCCagtaagaaaaaa tgaagtcgcCATTTCTAAAAGCTTATGTCATTGATATGagactgtccgat aactattacgtatTTTGGATATCAGAAGTGACGCTCAGAATAACAAAATA GCTCAGGAGACAACAGCTCGCTCATTTCGTAGAAGGGTGCACACAGGTCA AGTGTTGTACTCTTTCTTTCGTTGGTTGGAAAGTGTGAAGTAGGTCACAC ATAAAGGGGGATGTTTTACCTTCAGTGATGTAACAATTGGTTTCATTGTT GCTATAGAATAGGCAATGAAGTCACCTGACCAGTAAACAAGATGATGTCA ACATTTCCTAAAACTGATGCTTGATAGATGCATTCGAAAAGTATCGTGGA AATCGGAAGTGGTAATGAGGATTGAATGATAAGGATGGTCAATCATAATA GTCTTTGATGCTCGCTTGACTAAGGCAACCACTGGTTTAAGGTTCTGTTG ATGTGTTTTGTACAGTAGGAGAATCGGTAAGTTTATttacttttctcttt ttaaatctgtttgtttttatctgtttttctTAGGATAACTTTTTCATTCT CATTCACTCCTTTTCAACTTTTAATGAACGTTTATTTGGTGACTGGTATC TCTATTGTCCAATGAATAGTGCTTTATCGtatttttcagatttcaaatat tttatgttttcttcCCTTTTTCTTTTAGACTGGCTATGATGGTGTTGAAA GGGTGAGATAGGTATTAAGGTCATTAAAACCTTCACCACATGGTTGCTCT CTGTCAACTAACGAGCATCAGAGACTGTTATGATGAATTACCCTTATAAA TTCAATTCTCGTTACCGCTTCCAATTTCCACGATACTGTCTGAATGCACC TATTAAACATCAGTTTTAGGAAATGGTGACATCATTCTTGTTTACTGGTC AGAAGACTTCATTGCTTCTATGGCAACAATGAAACCTATTGTTACGTCAC TGAAAGTGAAACCTTCCCTTCCTTGTGAAGGCTTCTTTACAATTTCaaat cgatgaaaaaagtgCGACACTACCCCTGTGAGTATTCTTTTGGGATACGA TCGAGCAGCTGTCTCTTGATGTTGTTTTCCCACCATCTCTTCAAAAGCTG AATACCGGGGTATTGTGTCTCAGAAAAAAGcatattttgttgatttctcA AAGGTGGTATTCTATTGATAGCGTTACGGTCTGTTCTGTTGAATATATTG TTTGAACTGGTCTTCAAAAATCGTCGCAAATAGTAATCGTCAATGATTAT AGTTATCGCATTAATATTGACATGGCTAATTTTTTCTCACGCATTTAGAC TATATGGTCTTTAAACTTATGGTGTTTTTCTAATATTTGTGGTTCCTCTC GAGGCACTGGGGGATGAATCAAGCCCTCTTGAGTCCgggtctcagtgacc cggtggtaATAACTATGTGGGATAAGATGAAGAATCTATATacaaatggg gataaaaatccgCTGCTTTTGTTTGGAGCTCCATTCTCTAAATCTCACAA ATTACGATTATTCACTAAGGATTGGAATGAGATTCAAGAGTGTGTGATAT GAGAGGAATTTGAAAGGTCTGCAACGTCTGCATACTCCTGCTTAAATGTA CTGGTGGAGAAACGTGCTTTTCTATattctaaaaaatttttctaactCGT TCAGTCAGCGAACCTTTGTAAATCAACTCTAACTCCCCTTAACTCCAAAA ATACTGCACTTAGTTGCTCGTTAGCGCATGTTGGCAAGTTGTTTACGAAA GTTGCCGAGCGGAAAAATAGCGATCAACCCGATCTTGAGTTATTAACAAA AAAGacataatgacgtcatcaaaaacggGGGTTTTGATGGCGCCATGTCC AAATAAAATGAATAGTTTAGTCATGTCAATTTAGAAAGTTAGCTTTTGGC CTACTTTAAACAAGAAAATTTCGCATAGGAAGTAGAGATCAGAAAATCCA ACTGGTGAAGCATACGTCTAATGAGTAATATAGAAAAATCGATTTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037263TCONS_00037263Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037263-proteinTCONS_00037263-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001601supercontigsc0001601:43151..49798 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.04 0.09 0.12 0.24 0.21 0.17 0.13 0.01 0.03 0.07 0.03 0.01 0 0 0.02 0 0.02 0.01 0.02 0.02 0.05 0.01 0.05 0.02 0.1 0.02 0.04 0.04 0.05