XLOC_021657 (gene) - C. hemisphaerica

Overview
NameXLOC_021657
Unique NameXLOC_021657
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001496:9644..13629-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021657 ID=XLOC_021657|Name=XLOC_021657|organism=Clytia hemisphaerica|type=gene|length=3986bp|location=Sequence derived from alignment at sc0001496:9644..13629- (Clytia hemisphaerica)
TCTATCTAAACTTTCACCTTATAAATTTCTTAAAAAACATCAAATCATGT
AAGTTTGTTTGTTTGTTGTTTTTTTGGCCTGAGGATTGTATCCTTATATT
TACCCCTTTTATATATTAAAGTCCATGTATGTATACAAATCATTGACAGT
TTAAATACTTGCAATCTCAAATTTGTGACTTTCCTGTTTGATAAAAAAAT
TTACAGTAGTGGATGAAAAATCTTATGATAACTTTTGCAGGGAAAAAGTA
AAAAAGTTCCAGCTTGTAAGCTTTGCAGTATGTTTATCTTGCTTTGATTT
GAGCTTGAATTTCTTTCTACCCAAAAAGAGACATTAAAAATGGGGATGAA
ATAGGAGCAAAGTTAAGAAATCCCCAGANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCAAGTC
ATAATCTCAAATTATATCAGGACGTCAAGTGAAAAATTGCATATCATGAT
AACATATTTCAGTAACAGTCTCAATTTATACCAGGGCGTTGGCGAAATAT
TCCAAGTCATAATCTCAAATTGTACGCAGGACGTCAAGTGAAATAAGTTA
TAATTTCAAATTAAACCAGGACGTCAAGTGAAATATTGCAAGTTATAATC
TCGAATTGTACTAGGACGTCAAGTGAAATATTCCAAGTTATAATCTCAAA
TTATATCAGGACGTTAAGTTAAATATTGCAAGTTATATATAATCTCAAAT
AATACCATAGGACGTCGTGATTGCAAGTCTTAATCTCGATAATAATCCAG
GATGCTGTGCCAAATATTTCATTTCGGTATTGTGCTCTCTGCAAATTACT
GTCACACATATTCTCATTATTTTCCCATGCATCCAACTTCTGAATTTCTG
ATTCTTACCTAGAAAATTTAGAATAATAATCTGATAATTTTTAAAGGTAC
GGCTAGGTAACTGAACTTCTCGACAATTCAAATCAAAATGAGAAAATGTG
AAAGTTTTCGAACAAGAAGTATATTAAAAGAAGTATATTAAAAGCAGTCT
TTTAAAGTCCACAATTGACAATAAGTAGTTTGTTTGACATTTTTCAAAGT
TGTCAAAGAACTGCTAACACCAGATGAAAATAACTTTTTACGAGTGGAGA
TATGAGTTTATTCACATATCTAATGAAACACTACCTGTGATTCATAGGAT
TCATAAGAAATATACAAACTGACTTACCTACTTAGTTTATCTGTGTCTTT
TTGCTGTGTGTCAGTATGTAGACTTCAGTTGAAAAATCATTTTAAAACAG
CTTCTACAGAAGCATACTTGAGGAATAAGTACTCCCTTAAACTAAGTTAT
CTTGTAGTCTCAATAAAACAAATGAACCAAGAAGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAAAACCACAGATCCATCTTGCATCTTGTCCTTGTGT
CTTCTTCCCAGAGACCAGCGTGTTTTTGATCGTTTGAACCAAGCTCGGCC
TTTAAACTTAGGCGCTTTTCACCACGGAGCGACTAACCAGTCTCACTGGT
TAGTCCAAGCAAAACCGCAAAGTTTTTTTTATGTCAAATAGTTATCGTCC
GTTTCTTCGAAACTCTCACGCCGATTTTTTTCCGTATACCGCCATAACAC
CATACCGCCATTTTCCCGCCTTTACTATCACTGTAATGGACGATAACATC
GTCTATGGTAAATGCCGCTGTAAATCAGGGGGTTCAGATCATTGTTGTAA
TTTGATCATTTGCCGGTTATTCTATTCCCAGACAGGAAAATAATTTACCG
CAAGCAGAATATTTTTGTACCTTGTACCTTTTGTACCTGGTGATTTTTCA
GCTTGAGATTATGTCTAATGTTATGGTTTTTTGGAGTGCTTGTTCTAAGA
GATGAGCGAATATAATTATTTTTAGTTTTCAAGAGAAGCAAATTTAATCT
TTCTTCTACAAGATTAAACTTTAATATAATGCCAATATTATGCGGGTATT
ATGCATGTAAGTTTTATATTGATACTTACTTTTTGCATAGGTTTTGCATA
CTTTTCAATTTTCAATGAAATCTCACCACAGCAATTAGGCCACCATAATG
TAGAGAGCCGCGTGGTCTTTCGAAAAACCAGAGGCTTTGATGAGTTGGTT
CAACAATTAGAACAAATAAACACAGAAACAGCCAACGATTACAAAGACGC
GTTTGCTGACACCCTGTCAATTGTCACACCCATTGTTGATGAAGTGTAGG
ACATGCTTTATGAATATTTATTTGTACAAGTGGTCAAATTTCTTTTGATC
GCAAAGAAAAAGCAAAGATTGACATACATTTCCTCGTTGTTCCTTTTTTT
TAATTTACACTGGAATATGAAGGGATTTCATATAGTTTTGAGATTGCTTT
TGAACGATATAAAGTCCAAGGTTCCACTATTGTAGTTTTCTTATTATACC
ATTCTGTACCATTAGTTGTCTGAAACACTCTTTTCTATTAGAACAAAGGT
CAAAGAAACCCGCAGAAAATAAAAGTAATACAAAAAAGTCCTAATCTTCA
AAAGTGCTAATTTGATATCATTATTTATCGTTTTTTGAAAAATCAGGGTC
GGTTGCCCCTGTATGTATGTCTTTGAAGAGTGTCGTAAATTTTGCTGTGT
CCAAAATAAGATTTAGTTATCGATCACATTCCAAACCTTATAATTTAGCT
CTTTAGAAACAGTGATCTCTAAAGGCTGTTTCGAAGGTCATGTAAATTTT
GAAATCTAAAGCTTTAAGAAAAATAACACAGTCAGACTAGATGGGGAAAT
CATGTTAAAAATCTGCTAAACGGACCTCTCTATTTTTCAGATATTGCATT
TTGGAAGAAACCCGCACTTAAAGTTTATGCTGTAGCGAAAGATTGGTTGG
AATTTGTTGCAGCAGGAAGCAGTCGAGAAGCATCAAAAATGAGTGATTCC
ACATCAAATAGAGATTACAGTAAGCCTAGTGTTACTTTTATTACTTTTAT
CATTCATGGCATATTGGTAAAAGTGAATTTCAGTATTATAAATTTGAACC
GACCAAGTTTTGGGAAGAAGATATTGACTATAATTCTAACATCTAATGGT
TTTCTTTGAACAATAATTTTAAATATGTACACATGGAGGTATTATTCGTT
TTTAAAAATAAATTTATGAATTTACAGAATCACAGCTACGGTTTAATACG
AAAACTGTCAAACTCTCACTTTCCTACATCATCCACGCTAAAATACACTT
TATAAGAATGTCCATGATGAAAATGCCCAAAAAATTAAGAATAATGCTAA
GAATATCACCATCATGGAATTTTGCTACTCGAGCTAAGAATGCTTGAGTC
GTATGTACTAAATGTTAAATCTACTCTGAATTAGGATACTAACCTAAGAA
TGCTGTAAGAATATTTTATGATGATTTTCCCAAAAAAGTTAAGAATATCC
ATGGTGAAAAGGATTTACACCATTCTTATAAAAATAAGCATGTAGTAGAG
TACTACTTCCGTAAATGAAATTAAAATTTTCTTTACAGATGAAATCAGCA
GAAAGCTTGAAATCATCGAAAACAAAGTGGACGAGTCGATCAAATTTCGC
AGATTAGTAGAAGCATTGTATGAAGCTTTATCGTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036680TCONS_00036680Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001496supercontigsc0001496:9644..13629 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.53	1.55	1.2	0.59	2.14	0	0.68	1.27	1.78	2.21	0	0.35	0.35	0	0.3	0.32	0.4	0	1.12	0.59	0	2.99	2.42	1.1	0	1.01	3.62	6.19	1.17	0.6