XLOC_021531 (gene) - C. hemisphaerica

Overview
NameXLOC_021531
Unique NameXLOC_021531
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001476:8448..12356-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021531 ID=XLOC_021531|Name=XLOC_021531|organism=Clytia hemisphaerica|type=gene|length=3909bp|location=Sequence derived from alignment at sc0001476:8448..12356- (Clytia hemisphaerica)
TCTAACTTTAAATTCTTGTAGGAACTAACTGTCTGTCCTGAAGAAATTTC
CCATATTATTTTCCTTCTATTTTAGAATCATTGGATGTCTTGAATAATGC
CCAGATTAAAAAGTATTATGACCATCAAACAGGTATGAAACAGCGTTTCC
ACAAATGAAGTACACTAAAATGAAGTACACTAGTATATCCAATTATTATC
CAAAGATAGAAAGTCTAATTCAAAGTAACTTACTTCACTACAATCTAATC
ATGTATTTTATTGTTACAGCACAAAGTTAATATTTTTCGTTTACTAATTT
AAGTGTCATTACTCTTGATTTAGTCACTCCGTTCCCTGTCCGTGATGCTC
ATGAAATTTGGCAACAGTGCCAAACGTTAACAAAACAAGAACTCGACATC
TTTATCGAGCACAGATGGGAACTTTTAAAGTTGTTTGTAAGGGGTAGATG
CGATTCTTTTCGCTGGAAAGCCTTTTATGGCTATGGAGATGAAACAACAT
TTCTAAAGGTAAATAGACGGCCTTTCCGAGTAGATTTAAGATTCAAAAAG
ATACCCTTTACCTCAGGGTTTAACTGATTTGCATTTCGAAAATCTTGATA
ATTGAGCTTGCATGAAGGCTGCCAAATAGAGTGGATCATTTAATACCTAC
TACTTAAATTTTCAATAATGCAAAAATCAATTCAGATTGCCAATTTAAAT
TCTAAAATTGTTTAACCTTATGAGGGTCAACCATTTATTTATTAGCTATG
TCAAAATGAAATTAACTTTTTAAATTGAACTTTTAATGCTTTTTAGGATA
AACACGGAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTG
TAAGGGGTAGATGCGATTCTTTTCGCTGGAAAGCCTTTTATGGCTATGGA
GATGAAACAACATTTCTAAAGGTAAATAGACGGCCTTTCCAAGTAGATTT
AAGATTCAAAAAGATACCCTTTACCTCAGGGTTTAACTGATTTGCATTTC
GAAAATCTTGATAATTGAGCTTGCATGAAGGCTGCCAAATAGAGTGGATC
ATTTAATACCTACTACTTAAATTTTCAATAATGCAAAAATCAATTCAGAT
TGCCAATTTAAATTCTAAAATTGTTTAACCTTATGAGGGTCAACCATTTA
TTTATTAGCTATGTCAAAATGAAATTAACTTTTTAAATTGAACTTTTAAT
GCTTTTTAGGATAAACACGGAACCGTGCACTCAGAAAAATTGTCAAATAA
AGGTGTTTTGGGGGAGCTCTCGTCTACCTTGGTTATTAAAGGTTAGCATT
TCCATGTTTTCCCATTTTTAGTTGTGATTATAAAAATAGTTATTTAAAGC
TGCATTTGTGACAGGGTTGTATTGTTCTAATCAAGTTAGGGAAAATGTCT
TTAAGTTTACTGAAACATCCATGAACAAAGGACTTTTGCTTTTACACTAT
AGAATTGTTGAAGCCAGACGTCTACAAGAACCTCCTTTAAACTTTACGAG
CGTCAGTGCCCAACGTTGAATCTCTTCGATCATCTAACTTTATAACTTGT
GTGCTGGCTCCATATGCCGTAAAGGTTTTCCTGATAGATGCCTCGAAAAA
ATCTCCAGACCAGATTCAGTATTTCATGGAATTTTGGAATGAAATAAAGC
TAAGTAAGTGTAGAATACTATCATTAACTTTGAAATCATGGTCAAGTCCA
TTGTTTACAAATTCTTTCAAATTAAAAATTTCAAAATTGTATTAATGCAG
ACAAAATATCAATCAGGGTTTCCATTTGATTTTTACAGAACCTATAAAAG
AAGAAGTGGTTTCAAAAAAGCGAGACACAACAGGTAAAGACAGTGATATA
AATAACCTACAAGTGAGGTTATCTATCGATATAAGCGTCCTTTAAAAGTC
ATTAAAATGTCTTTATTCCAGCTTGGTATTTGTCTTTTTCAGAAAACTAG
ATTTCGAAAAGTCAACCCTATTATTGTTAGTTGAACACATTTTATGAAAT
TCTTTCGAAAATCAGTAGCTTATCCTTGGAGTAATCACGGTATAAGTATA
TTTGTGTTTATTACTTCATTTAGGAAAACGCAAATTCGCGTCGAAATACA
ATAGACTGCCTAAAGATAAGAATGGTCATCTTTCCCTGACTGGTAAGCCA
TTGTCATTAAAAAGAAAGAACCAAAAAAGAATTTGAGTATAGTAATTTTT
TATGATTCTTGCCATTTTGAAGGGTAATTTTCATTACTTGATGTTGTTTA
CGTAATANTGTTTGTAAGGGGTAGATGCGATTCTTTTCGCTGGAAAGCCT
TTTATGGCTATGGAGATGAAACAACATTTCTAAAGGTAAATAGACGGCCT
TTCCAAGTAGATTTAAGATTCAAAAAGATACCCTTTACCTCAGGGTTTAA
CTGATTTGCATTTCGAAAATCTTGATAATTGAGCTTGCATGAAGGCTGCC
AAATAGAGTGGATCATTTAATACCTACTACTTAAATTTTCAATAATGCAA
AAATCAATTCAGATTGCCAATTTAAATTCTAAAATTGTTTAACCTTATGA
GGGTCAACCATTTATTTATTAGCTATGTCAAAATGAAATTAACTTTTTAA
ATTGAACTTTTAATGCTTTTTAGGATAAACACGGAACCATGCATTCAGAA
AAATTGTCAAATAAAGGTGTTTTGGGGGAGCTTTCGTCTACCTTGGTTAT
TAAAGGTTAGCATTTCCATGTTTTCCCATTTTTAGTTGTGATTATAAAAA
TAGTTATTTAAAGCTGCATTTGTGACAGGGTTGTATTGTTCTAATCAAGT
TAGGGAAAATGTCTTTAAGTTTACTGAAACATCCATGAACAAAGGACTTT
TGCTTTTACACTATAGAATTGTTGAAGCCAGACGTCTACAAGAACCTCCT
TTAAACTTTACGAGCGTCAGTGCCCAACGTTGAATCTCTTCGATCATCTA
ACTTTATAACTTGTGTGCTGGCTCCATATGCCGTAAAGGTTTTCCTGATA
GATGCCTCGAAAAAATCTCCAGACCAGATTCAGTATTTCATGGAATTTTG
GAATGAAATAAAGCTAAGTAAGTGTAGAATACTATCATTAACTTTGAAAT
CATGGTCAAGTCCATTGTTTACAAATTCTTTCAAATTAAAAATTTCAAAA
TTGTATTAATGCAGACAAAATATCAATCAGGGTTTCCATTTGATTTTTAC
AGAACCTATAAAAGAAGAAGTGGTTTCAAAAAAGCGAGACACAACAGGTA
AAGACAGTGATATAAATAACCTACAAGTGAGGTTATCTATCGATATAAGC
GTCCTTTAAAAGTCATTAAAATGTCTTTATTCCAGCTTGGTATTTGTCTT
TTTCAGAAAACTAGATTTCAAAAAGTCAACCCTATTATTGTTAGTTGAAC
ACATTTTATGAAATTCTTTCGAAAATCAGTAGCTTATCCTTGGAGTAATC
ACGGTATAAGTATATTTGTGTTTATTACTTCATTTAGGAAAACGCAAATT
CGCGTCCAAATACAATAGACTGCCTAAAGATAAGAATGGTCATCTTTCCC
TGACTGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036514TCONS_00036514Clytia hemisphaericatranscript
TCONS_00036513TCONS_00036513Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001476supercontigsc0001476:8448..12356 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.3	3.89	1.99	1.09	4.72	2.83	4.33	5.48	9.75	7.03	9.53	12.83	9.6	9	7.56	7.94	7.95	9.01	5.58	8.97	7.52	6.75	4.58	6.36	4.81	4.43	3.66	3.38	4.36	2.62