XLOC_021314 (gene) - C. hemisphaerica

Overview
NameXLOC_021314
Unique NameXLOC_021314
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001429:37009..44450+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021314 ID=XLOC_021314|Name=XLOC_021314|organism=Clytia hemisphaerica|type=gene|length=7442bp|location=Sequence derived from alignment at sc0001429:37009..44450+ (Clytia hemisphaerica)
GTTTCATTTTATCATTTCTTTTCCAGAAAATTATGATAATATAAATGAGA
ATGGATATTGATAGAGATGAATTTGATAAGCAtgttgaaaatcttcaaaa
atactgTAGAGTCTGTGGTGAGAGAGTCGCAACAAATATTAAAGGAGGAT
ATAAGAATGCCAAGCATGTCTTATTTTATAAAGATCAACTCTTGAAGTAT
TACGGTACTAACATTGAAAATGATAACATTCGTCAACATCCAACAACAGT
ATGTATGAAATGCAATGCAAAGTTATATAAACTGCTTAAAAGTGATGTGA
AGGATATAGAAGCAGTGGATAACAATGAACAAACAAGTGGTTCCAGTTCC
AGTTCTGTTCCTGTTCAGTTTTATTTAATTCACCAATTCGATGCccatca
aagtttttcaaaatgtgcaATCTGCCAAACCGCATCCAAGCGTGGAAGAC
CAAAATTGCCACATCCACAGCAAGAGTCTACGCCAGAATCTGAATTTTTG
TACTCACAAGTTGCTGAAGAAATTGGCTTCAAAACTGTGGatgagaaaaa
ctttttaatcgTTGGAAATAAAGTTATAGAAAAGGAAATAAACATATGCA
GTGACTTTACAGTTGACGTAAAGATTTATGGAAAACTTATGAACAAGGAC
ATTCAGAATCAACTTGGTGTTGCTACGACGATTGATAAAGAGAATGCATT
GGAGTTGTTCAGTGCGGTTATGGGGTTGAATATTTGTCCTGGTAACACTG
ACTTTGTTGACCTAATCCAACACAAACTGCGATCTTCTGGGATTCAACAA
TTCAAAGGAGCAGACAAAGAAGTTATTGCCTTTATGCAGACCGAATCAAT
GCTCACTATTGAAGACATGACCGTGATTCGTCACAAGCAATGTGAACTAG
CATTCAGTGGAAGTGGATCAAGGTGCCAAGTCTGTACCTCATATCGCTCA
AACTTATTTGCCATGAGAACCCGAATTCAAAGAAGAAGTGCTGATAAAAG
TCCTCCATCTATTTTCACACCTGACAGGTATATTTGTTATACTGTATCTA
GGTATACTGTAACTTTTTACCACCAAGCAGTAGTAGACCTTCATGTTCtg
caattttaagtttttaagctAGAATCTGCTAGAATGTAAACAAAGTCATG
TCATAACTTCGATGGAGGggtgtttattttttaattttaaaacacgcACT
CTTGAAATTagagaaatgcaatttttactaaaTCTAGAAACTCTTTACTC
GATGAAAAAAATGGCCAACAAAATCATTTGTGATTTTAAATAAACGTGTC
ATAGCAAGTCAACCAGAAAACTTCATCCCCTTTCGGctgttttttttatt
ggaaagtctcaaaatttcttttttgaccaATCATGACAGATAAACCAGTG
ACAGTAAATTTGTGGGGGAAGCtccacaaaaaatgaatttcttgtCAAAA
GATCACTCACAACCTGTGAATTCCAACTTTTTGCTTAGGAGTTTTGTACT
TTCCTATACTTTCAGCAAGCTGAGCCACGAGGACCTTCTGGACAAACTAA
AACGTCTGGAGATTGAAAAGAAGAGTCTAAGTGAAAGATTGAATCGGATG
ACCAAGAAAGTCTCCCAGTTGTTGAAAAGAGATGGTACTGAGCTCGATGA
CGAAACTGCTGTAAtcataaatgaaacattggaGAAGAATGATTCACCAT
TCGATCCAGACTCTCCTCAACATTTATTGTGGGAGCAGCAAAAAACTCAA
AGTGCATTGAGGGATGGAAGGGGAATGCGCTGGCACCCACTTATAATTCG
CTGGTGCCTTAGTATTTATCTAAAATCGCCAGGGACATACAAAAACATTC
GTGAGTCACCCTTTTTATTCTTACCGTGTAAGAATACTCTCCTCAAGTAT
ATTAATTTCACTGACCCAGGATGCGGGTTCAACATTGACATTGTAAAGAA
GCTTGTCAACCACGTGAAAGTAGAGACGCTTGATGAATTTCAAAAGAACG
TGGTACttatttttgatgaaatgaaaatcaaaagtgGCTTAGTGTACTGC
AAGACAACAGGCAAATTGGTCGGGTTTACAGAAATGGGAAGAATCAATGA
TGAGATCGAGGAGTTTGGAAGGCTGTGCAACACTGACAAGGACGACGCTG
ATGAGGATCGCCCAATTGCGAAATATGTAATTGTTTTCATGGTGCGGGGA
ATCTGTAGTGGCTTAAACTATTCTTTTGGTCACTTCGCCAGTGAGGGATT
TGAAAGTGATCAAATTTTTTACTGCGCCTACGAGGCAACACGCATTCTCG
AAGGTATTGGTTTGAAAGTTAGAGCCATGACTGCAGATGGTGCATCTCCA
AACCGCAAGTTTTTTAACTTGCATCGAATGTCAGAAGAAGACAACACTAT
CAATGGATCTGTTTATTGGGCAAAAAACCCTTGGGATTGGGAGAGAAACA
TCTATTTTGTGTGTGACCCTCCACATCTCGTAAAGACAACACGGAACAAC
CTGGAGAACTCTCATGGTAATCGAAAGACTAGAAACCTATTGGTAGGAgt
atcaaattttcttttttactttttttttgataaataataaattttagtgg
gaattatttttttgtgaatgacaaaaaaagaactattttcacttactatc
aCTAATTTAAATTTCTGCatgtaaaaatgtaaatttttcgGTCAATCTTG
GGATGAAGGATGTAATTTGGGATTTCCCTTAAATGATATTTATTGttaag
tttcaaatttttcgtaATATTTTAGTCCAAGAGCTTTgtactttttgtaa
aaaaatctttcacaTCAAACAATTTGTGCAAGCGGCGATAGGCCCCGTCA
AAGCTGGGTCCTGTCAAAGCTGGGTCCCAGAGGTACCCGCGAAAGGTTTA
AGATACATGTATATAACTTAAAATTGAATAACTTAACTTTTAGTATGAAG
GACAAGAGATTGGTTGGCATCACATTGTCAATGTTTACAACTGGGATTTG
GGACCAGCAAGACACGTTGTAGGATTACGCATGGGCCACAAGCTACGTGA
AGAACATGTCAATTTAGATCCACGAAGTAGAATGAGAGTCAATCTAGCAG
CTCAGGTATGTATATTTGGACCTTATACCGGCATCTATTCAGTATTATTT
GACGACTCGTACTTATAAATACTTATAACTTAAATATTCGTACTTATTTA
AAACATTGTTGTAAGTTCTGGTAATTTCTCAAAAAGTGGAATTTTGAAga
gaattttctttttacatgaTACCTttcatacacttttttataaaaaccag
taaattttggctaaaGCTgggcttttgaatttttcaggctttaaaatgtt
cttacaatgttcttaatacGCTTTGTTTCTTTAGGTAAGAACTTAAAATG
GGTTTTAAACctgttaaaatctgttaaaactTTATTAATAGTTTCTGAAa
ttgaggctcagattgttcttaatttgttcttaggttttggccaattttca
gctaCAAGCAATAATATACTTCTGTTAATGTCTTTTTTTAAGGTTCTCAG
CAAGACAGTTGCTGACATGCTTGCAGAACAAGATCTCGCAGACACCAAAT
CGACAGAAAAGTTCATCAGACTGATTGACAAGTTTTTCGATTGTCTCAAT
GTTACTGCAAGAGGAAAAAACCGCAAAGCAGACAGATCTTCCTATGAATC
TGCTAATGATTCAAGGTTTGAGGTATGTATGCTTTTTAGTTAGGTTTGGT
TGGGTGGTTTTGGGCTATTTAGTATTTAAAACCATACAAGATTTGCATTG
GGGTTTTTCTGGTATTCTGGTATTGTTGCTTTGGTAATTAAATGAGTCCC
ATCTTAATTGAAATGCCTACTCTTTGGTGCTAAATTGAAGGAGGTGAAAT
TAGCAGGGTTTGTACTCAGGGAAGAATGCAAAAAATCGAAAGGGTGTGGT
GGTTTTGGAGTGATTTTCTTGAAATGCCtgtaaaatgaatttttgacaCT
TATTTAGGGAAATTTCATGACATGGGGTCTTTTGAATGTTAAAAAAGGAG
TGATCTCTTTCCCTACCATTTTAGGCAGTCTTGTTATAGACAAATAAATA
aacactactactactactactttagaaaatttttactattttcttCTTAG
TGGCTGGAGAACGATTTTCTCGAATTCCTTGACAAATGGGAAGCAGAAAG
TAAAGACTTGGACCTAACAAAAACTGAGAAGGGTAAACTTTGTTTGAGTA
AGCAGACACTCCAAGGATTGCGCACAACAAGTACGTATTTTTAAGGATCC
TCTTAagaggccccccccagcggttggcgtgatggcgtgatggagggttt
ttcgtggcgtgatggcgtgaatttttgaaaaatatggcgtgatggcgtga
aactgaagtgccggcgtgatcgtgaaatcaaGGTTTTTTGGGCGTGATAG
CGTGAAATTTTTAGTaaagcgtgatcgtgaaatcagGTGAAATCAATTTA
TCAAGGCGtgaattattaaaaaaagccaCNATCGTCGGGAGACAATTTTG
TCGGTGTGTTATGCATCTTTCTAAATTGCGTGAAAGGGTAGTCAACGACT
GATTTTATATTTTGTCTGGCTTGCCAGACAATCTCTTCGTTTATTTTTGC
TAGACTATGTACATAATTACCTATCTTctagttttattttttcttcgaaa
GAAAATAACATCCAAAACAAGAATTTATTTACCATCGGACTTTGTCATTA
AATTTCGAAactattgaaagaaaaatataaaacagcCTGTTGAATCTTTC
CAAAAGCAACACCAATCTTGATTCTtgacttattttgaaaatttttgacc
gAAACTAATGCTAaactttttgcgaagcgaatatacatgagcgaagcagt
tttgctatcgtgtatatgtacctttaaatctcacctacgctggggagcgc
aaatgaaaaattactatatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTATTCTGGTA
TTGTTGCTTTGGTAATTAAATGAGTCCCATTTTAATTGAAATGCCTACTC
TTTTGTGCTAAATTCGAAAGGGTGTGGTGTTTTTGGAGTGATTTTCCTGA
AATAActgtaaaattaatttttgacacTTATCTAGGGAAATTTCATGACA
TGGGGGTCTTTTGAATGTTTAAATATGAGTGATCTCCATCCCTACCATTT
TAAACAGTCTTGTTATAGACAAATAAATAaacactactactactactact
ttAGAAAACTTTTACTATTTTCTTCTTAGTGGCTGGAGAACGATTTTCTC
GAATTCCTTGACAAATGGGAAGCAGAAAGTAAAGACTTGGACCTAACAAA
AACTGAGAAGGGTAAACTTTGTTTGAGTAAGCAGACACTCCAAGGATTGC
GCATAACAAGTACGTATTTTTAAGGATCCTCTTAATACTTTGCCCCCACT
GACTTGCATTTAAAACCCTGGACAGAGAGCTACATCTACAATTTTTCAAT
CCAAGATTTGGTTGGCCAGAATTAAAAAAACTCTGACCTCAACATCAGAA
CAGGAAGATCCATGATAGGATGGCACATTGTGTTGATTTTTATCATTTAT
TACAATGAAGATTACATGCTATCATTGCTCCCTCGTTGACTCATGGGGCT
TATTGTAATGTGAAATTCTAATAATGAAATATTTGAGGAAAGCGTTATTA
tgatatttaatttttattccTTTACTTTAGCGAAATCGTTTATCACTCTG
GGAAGATTGCTATTTGCAGAAGGAGCACAATTTCTTTTGTCAGAGAAATT
CTCACAGGATCCCGTCGAGGAGTATTTTTCTAAGCAACGTGCGAAACGAG
GACCGGATGAAAACCCCGATTTGGAAGCATTCAATCGGAATGTGTTAGGA
CTTAATGTGGCAGGAGATGACCTTGTTAGAGCGGTAAATGGAAATGTACG
TAGGAAGAACAAAGAGCGTGCTAAACTTGATATTCATGACCTGTCGAGGT
TACCAACTAAAAAGACTAAACTGGAGTGAATTTTTGTGCCGCTgtaactt
ttatttattttacttttacgattttgtactttttgtttttttttcgtagA
TCTTGATCAATGAGTGATAAATATTCTATGAcaagtactcttaggtgcca
aataaacggggggggggggggggaaaatttttcaaaNatggttaaattcg
tttttttcaaaaagtgtcgcctcgtgcgtttagatataccaattcttaaa
agctacggAGATAATACACGCGGTCACCGGTACTAGATAAGCCTTGTTTT
TATCTCCTTAAGGTTTGAATTAGGAAATCTAAAGAAGAGGTCTGAAAATC
AGTgcgggctggaagcgttcaagaagcgttcaaatggcgctcatttttca
agaagtcattgcattgactcgagCAAACTCTTTCGAAgggctttcgaact
tttccaaattcgaatgttgactaaaaacaacattgttttgaaaatagaaa
ttggtgttttgaaaagagatggtgtttgatgaaaagaaacgaagaaagca
gctgaacttgcggaatgagaagaaagaagatggaactTTTATTCTATTGC
AAGAAGAGGATCTAAGCTGAAGAAATGAACTGTATACATATGGTGGGAAA
GCCATTCCTTTTGGCTTTTGGTTTAGATTGAATTGAATCTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036240TCONS_00036240Clytia hemisphaericatranscript
TCONS_00036241TCONS_00036241Clytia hemisphaericatranscript
TCONS_00036242TCONS_00036242Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036242-proteinTCONS_00036242-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001429supercontigsc0001429:37009..44450 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.66	2.72	1.7	1.01	24.36	19.54	7.1	7.78	3.35	5.14	4.59	3.63	2.95	3	2.25	3.13	2.4	2.05	1.92	2.44	2.4	2.94	1.29	1.83	3.17	3.37	4.07	3.96	5.24	4.27