XLOC_021237 (gene) - C. hemisphaerica

Overview
NameXLOC_021237
Unique NameXLOC_021237
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001415:832..11378+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021237 ID=XLOC_021237|Name=XLOC_021237|organism=Clytia hemisphaerica|type=gene|length=10547bp|location=Sequence derived from alignment at sc0001415:832..11378+ (Clytia hemisphaerica)
GAATATTGTGGGAAATGCGGTGCAAAAATTGGTTGTAACTACATGTTTTG
CACGAAATGTTCTGCTCCAAGACCACCTAAAAAGTTCAGAGAAGCAGAAG
GGAATTCAAGCACTGCCACTGCAGCTGAAGCTCCtgttttaaaaaagttg
aatcaGTATAAAGGAATCAAAAGTTCCAGTGCATCAAAAAAAAAGGTTGG
TTATACCGTTATAAATAAAAGCTTCCCTATTTTCAAACCATACAgtagta
ccgtcaactgctctaacttgggattaCCTAACATAGCATGGGACGACTTT
AACATTTAACTTACCACTTTCTGGTCAGTTTTTTCTCTCTATTGTCAATC
TCTCTTTTTTGCATTGTATTGACAACAAATAGTTTCTATGTTTTTTATGT
ACAGTATAAAAAGATGACTCTGCtctggaatagaccttttttcaaagagc
ccaccctgttgaataattatgtagtccagcagaaaaacaatgataaaacc
atgcataattattacaatatgcatgatacagtgattatgcatggctctat
cattgtttttatgactggaggagtacataattattcaacaggacgtcctc
tttgaaaaaaggtctattaggtAAAATGACTACTGTTTTTTGGCATCCCA
TGTTATGTcaggtaccgtgagattgggtaacttgcatcagtggaggctaa
catgcatagccctcaaatgaaagacctggctggtcattaaaatacaactc
tcgcagctctactctataccatttttgttttggtttaactttgtatttta
atgaccagtcaggtttttcatttgagggctatgcatgttagcctccactg
atgcaagttacccaatctcacggtagtcccaagttagagcagttgacggt
agggTATTGACAAAACCTTGATTTTCTAGGGGGTTTGGTGCATTTTCTGG
AATTTCCGAGCAAGGGGTTATTATTGCAGACCTGCCAAATCTCAAGGTCT
CAGGTTTACCATAAAAAGTCTCAaggtttttgagcttttaagttaattct
caacttcagttgagctataatctgagaatgtctgtctgtggGTGTGTCTA
TCTGTCTGTGTAAAGGAAAGGGTAGtttttaaactgttttttttaaccaa
aagtcagggaaaattaATGTAGGGTAAGAAGgcataactttttattgcaa
ttaataattatattttgcaagatgtttgaaaaatgttgatattttttcca
aaagatttTAAATTATTCTCAGGACAAGGTGACTGAGAatcataatttct
tttttttaggcAAAGCCAGAAAAGTCTACACCTAAAGAAGTAAAGATCAA
AGTTGGTTTGGTAGAGCTTACTGAAAAAAACACTCTAGTAAAAAAACGTG
GGACTAAACTGCCTGTCAACATCCTAGATAATGCTAAAAAAGATGACATT
TTAGCGGCTGCAATCAAAAAGCACTCAGAACATGACCAATACTTTTACGC
TACTGATGGCTATGATCTTATTTATCAAGATAATCGAATCGTGAAATTTC
TCCCTGGTGTGGCATGGGGAATCTTATTCcaaattagaatattttttttg
tcaagAAGGAGACTTACTACACTATGGTGATTATTTATcaaatggtgaaa
atgagaacaGCCCACCTGGATCCCCGGTAAAGCCATTGCAGCAGGAAAGA
GGACAGTCACCTAGACAACTACCTAAACCAAATGAACAACAGCCCGAACC
AACTAATCAACAATCTCAAGCAACAGGAAAACCCAGATTCAATTGATTTG
ACTGCCAATGTGCCAATCATCCATCATTCGACTGATGATGTGCCAATCAT
ACCAACACTATATCCTGACCTAGCTGGACCATTTCGAGAGTTTCTTCTGC
AATGTATGAACTTTGGACTTCTTTCAGCCCATTTCTTTGGTTCAGAGGAT
GAGTTCATGTTTACATCCTACACCGATCAGTTGTCAAGAAATGAGTATCA
TCTCTTGGGTCAGTTATCAGCTCTTGCCATTCTAAACATTCGCCAAAGTT
GGTTTGGTAGAGCTTACTGAAAAAAACACTCTAGTAAAAAACACTGCATA
AAACAATCTTCTTTCCATTTTTTGGAAGcccgaaaaacaaaatttttcgg
acatcaaataaagaaattatacaTTTCCGAATCCTTTTTCCGGAAAATTA
tcctttccaaattttgaaacaaaaaagaatttgttttcgtgatatcaaaa
attgagaaatttttgtttttcgattCGATGGAAAAGTCATTATTTTCGGA
CAATTATTATAATGGAaaggatatattttttctacaaaaaaagtgGAAAG
GTGTTATATCCTGTTAATtggaaaagaaattattttcgcCACTTTTGGAT
TTCCGAAAAGAGCCATTTTTCTGACATTGGGAAAATGGAAAGGTTCTCTA
TCCTGATAAATCGTaaagaatcaattttgaaagcttttggcTTTCGAAAA
GAGCTACtattctgaaaaaagaaaaatggaaaggtTTTATGTCTTGGTGA
TTCGTAAAGAGCCTATTTTTGACAGCtttggattttcaaaaagaGCCACT
TTNAGTGGCAATTGAGTCATCGGGTTCcacatggacccgtagctcaatgg
tagagcaaatgcccgcgaatggcatggttgtgagttcgagtctcgccgga
tcccttggttttccaacggttctggtggctggtcagaaaacaatatgaga
gcgactgtattcacctcattgtaaaaaattgtcaaaattcaaataaaatg
tcaattttggctaataaaatcttttgaaaggttttcaaactttttcgtaa
taatattttatgttccaaaaaaccaaaaacctttcaattttgacgatttt
ttatttttcgatcaTTTTGCCTAATTTCCTTAATATCTGTATATCTATAT
ATCCTTAATAATTTTTACGAACTTTTTTTGGTTGACATGGTAACTAATGA
AGTCACTTTCCATGGCAACGGGAGGTTGCCCAAAGCctcacctctcaaat
tttgaatttctatgAGGAACAAtaatcaatcataaaatccctttgcacag
gctcctgcacacgggaagacatgGTGGCCTCTActacataaaaaaaacaa
caaaaaacagccttttttaaTGTCACCCAGCCAGACATCTAAGGCCATAT
CTTTAGAttgaacaaatatttttcagatttattagttttttttgtggAAA
AGTGCTTTATTATGaaacattctttttttataagcataaagtttataagc
atattcaggctgaaatttgaaaagaatttaagcataatgctaagcatatc
TCCATATCTGAGATGCCAAAAACTTTGGGAAATCTTTACTTCTTTCAGAA
ATCAACTAAATTCAGAGGACTTTTCATAATAATAAACGATTTTTGACGTT
TCTTATTCAGACCAATTTATCAACTAAAATcgttggaaatccaaaaaaaa
tcaaggaaaattCCATGGTCTAATATAAGTATATTTTGAGGTTGAAAACG
AAATTTTGCCAAGCATATTGAGCCACAGCTCGATTTTtctgtatgcttat
aaaaagagaaTGTAATTCCAGTCATGATAAAAAGTGTGAACACGTGATTT
CTTGCACAAAGTACCTTTAAACCGGGGTACttgatttcaataaaaatttc
tgCCCTCATATCAAATTTTCTTCCTGTAAACCCATTACAGTGTATTTGGT
TTTTTCAGCTTTTAACAATCTTTCTAAAACTTAACTTTAGAAGCCTTTCA
ACAAGTCCGCAGACAATTCTTCAGTGACGACACACAGGAGCCAGCAGTTG
GACTCATGTGCCTCAATGACATGGAGATGATTGGTCATCTTTTTGTAGCA
AGCCTTGTCCATGATGGTCCAGGTCCTGGCTTTTTATCCCCCTGGATTTA
CGATTACATTGTTGGTGGTTTTGAGACAGTTCCTTTACCAAAGGAGTTAC
GAAATCCTATTTACAAACAAGTAAGAATATGATTGTAAACTTTATGTGTA
CTCAaataaagtcaatttttcaaatgtatTTCTCTTTATACTCAGTGAAT
AAATCGAATTTTTCTTATTGAAATACTCATTCTATTTAATCACTTAGAAT
TATAGAAAttatgggtgctgggtatgtgcggacctTAGGGGTCGGTTTTT
TTACCTTCCCAAGTCTCTTTTAGggttacaaaaacaacaaagtcaaaata
atctctctaagggtcagcgGAATTTTTAACTTCCAAAGTCTTTCTaagga
taaaaaaaaactaggaaaagttacaaaaaacttTTCCGTAGGAAATTTTT
CGGAAATCGTCTCTCTATGGGTCGTTTTTTTACCACttttcacaggaaaa
aatcatcaaatcacACGCGTGTGAAATTCAATAATCACAAATTGTGAAAT
GGCTATTTCCCACGTAAATCACACGCGTGTGAATTTGCAAACTTTCACAC
GAGTGGGAAATACTAAAAACACAAACGTATTTTTTGAACTGTGAAATTGG
ATATCACATGCGTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTA
ACCACACACgcgtgtgttttgctatttcaCAAATGTGAAATCGAGTATCC
CAAAAGATTTTGGTCAAACGCACACACGTGTGTTTTGCTATTTAACAAAT
GTGAAATTGAGTATCCCAAAAGGTTTTGGTCGAAGGCACACGCGTGTGTT
TTGATATTTCCCAAATGTGAAATCGAGTATCCCAAAAGATCTTGGTCAAA
CGCACACGCGTGTGTTTAGCTATTTCCCAAATGTGAAATCGAGCATCCCA
AAAGGTTTTGGTCGAAGGCACACgcgtgtgttttgctatttcccAAATGT
GAAATCGAGTATCCCAAAAGATTTTGGTCGAATGCACACAcgtgtgtttt
gctatttcaCAAATGTGAAATCGAGTATCCCAAAAGATTTTGGTCGAATG
CACACgcgtgtgttttgctatttcccAAATGTGAAATCGANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCAAAAGGTTTTGGTCGAACGCACACgcgtgtgtt
ttgctatttcacaaatatgaaatctaaaaatacaaatcaggcaagcaaaa
agaaattcggAGCTTTTCAATGAACTTAAAATTTCCGCTTCTTTATTTAT
ATACTGTACTCCAAATTACAATTACACTGATGAAGAAATATTAAGTTACA
ATTTAATTAGAAAACAAACTTTTAGTGtttacaacttttttctttcactt
ataTACATAAGCAAAGTTTTCAGGAACAGATGAACAGTTCATATATCCGT
CGAGTATTTACAAACAACTGCAACTTCTATTCTAGTACGCTTTTCTGCCA
GTTAGTTCTCATGAGTTTTGTATAGTTCTCTGCTATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGGTTTGGA
TCTTGCCAATTCTTTCGTTTCGAAAGCTCTTGATTCCAAGCCCCATGTTA
ATCCTTTCGTTCAAGAGTAATATTACAGAATataatagaaagaaaaaaaa
aacaaaaaaatcttcttgaCTTGATCACATTGTAGATCCAAGTTCTTTGT
CAGCAACAAAGCCGAGTTCAGTTAAATTAGGGTCATGGGATACAGTAAAA
TAACGAATGTTCTGTGCGTGACGAAAAACNAAAAATTTTCTCAACTTGAA
GATCACGTTGTAGATCCAAGTTCATTGTCAGCAACAAAGCCGAGTTCAGT
TAAATTAGGGTCATGGGATACAGTAAAATAACGAATGTTCTGTGCATGAC
GAAAAACAAGTTACGTGAAGCTGGGGTCAGCCGTTCTATTCCTTCACAAC
AAGTCATGTAAGCAAGTTTCTAACTTCACTTGTCCTCGGTTGGGATAACA
GAGCGGTTGACCTTGATTAAGCTCTTGTCGGTGTATTGCCATTGACGCGG
AGCTAATGTTCATCGACGCATAATCTTTCCTACCGATGAAATGCCTCTCA
CATGATCCTAATGTTGTGTAACACAGTCTTGAGTTACCATAACGCCTTTT
TCGGCTCTAAAATCATATAATTTCATACAGTCATCGTGCTGGGTATcatt
caaaacataaaattcaaagTCTGACAAATGTTTCGCTGAATGCCAAGGAA
CGTATTTCAAATCCTTATTTGTCGTTAGCAAAGGTACCTTATATTACAAT
TACAATTATCGTGCTATTGTTATATAATAaagtcattttcaattttcaga
aagattgtattcgtgatattcatgatgtaatgtttatacggaagcaccca
aaagaCCAGGGTTTTGCCNCCCTTATATTACAATTACAATATCGTGCTAT
TGTTATATAATAaagtcattttcaattttcagaaagattgtattcgtgat
attcatgatgtaatgtttaTACGGAAGCATCCAAAAGACCAgggttttgc
cactaattttgaattttgagtgCTGCCGTATACTGTAGTTATAAAACATA
ACCtcataaatatcatgaattgtgtAATTAACAGTGTTGTAAATATCCCC
CTTCCAACAACCAACCAACCGAAACTAGCTCAAAATTTATTAAGCGTAGA
GAACTGTGTTTCACACGCGTGTGGTCTTTATACAAttcaatttttacttt
taaCATGCATATTTTTCGGAAGGATCTCGTACTATAATTTTCTTGTCAAC
ATGAGAAAAGACATTTGTTAATTTCGAAAACACACGCGTGTTCTTCATTT
CAATGTTAAATGAATTTGACTTAGTCGTcgtgtgattttggaaaaaaaaa
cgcGTGTGTTAATCTGCTTGTTACCTGGATAAAAGACATTTGTTATTTTC
GAAAACACACGCGTGTTCTTCATTTCAATGTTAAATGAATTTGACTTAGT
CGTcgtgtgattttggaaaaaccacgCGTGTGTTTATCCGAACCGAAATT
CCCAAATGTGAAATACGTATATCCCAAGACctcaaaactctaaaaaaatc
acaaactgaaaattttaaaaatcacacgCCGACAGAAAATTTCTGTGCAG
TAATGTTGGTTTTCACACGCGTgtgatttgatgattttttcctgtgtttg
tctctctaagggtcactttttcgccaaaatttagggtcggtttttggagg
tcaGGTCCGCACATTACCAATAGTACACTCTGGTACACTGGGTAAAAGAA
CCATAAATCCTTGCTCTTATTTTTTGCTTGTTAATACCCTTTTTGCTACT
AAAAAGACATTTCAGGTTGATTTGCTTTaaaagttttctcatttttttag
cCAATTTGAGTCTCATTGAtcttcaaaaacttttcaaatcaaattaacAA
CAAAAAGTGTTCCTTTTTAGCTTTACTGTGCAGAAGAATCTTTCAATGAT
CTCTTACAATCCGACGCTGGTATGGATATGCTTAGTGATATTGGCTTCCG
AGGAAACCCTATGACTATCGAAATCAAATCTAAAGAAGctattttaaggt
attttttaaaaatggatTTATAACGAAATAGACCTGCATACACTTTGATT
TTGTTGCTAATTAATtggctttaaccctattcaaactaCCTTTAAGTGGA
CCTAAAATGCTCACCTTCTGCATAACTACTGGTCTGATCttgctaaaaaa
atttcaagcaaGCTTCTATTATTAATACCTACCACTGGTCAAAgtttcaa
gtcaatagcattttccAATATTGAGATATAAGAATTTAGGACtaatttag
gcaaaaaaggcaaatttgggctggtctgtaaagtacacGCCTATGGCAGG
TGGGCAAAATTGACCTTGTGCCCCATATATATATGCCAAATGGAGTTCAA
GTTTAcctaatttttacatttttagtaAGTGATCAATATACTACCGCAAG
GGAACTTTTTGATGAGAACTAATTTTGAACCAGTTTTTTTCgattaggac
aaaaaagggtGCGGTTTACTCGACGCATTGGTCAAAGACCGAAAACATCC
CGGGTGATGCCATTCGCACTCGATGGGATAATGtgtctattttttatttc
tttatcagGTCGATGTTCATCAAAGAAAAGACAGAAATCGTTAATCTAGT
AAATCAAATAACGGAAGGCATGAAATTTTACGATGCACTGCCAATCATCA
AGAGTAACAAGGAAATATTTCGGCCTGTTTTTACGAACAGTACCCTTTTC
GAATGGACATACGAGACTGTCTACCCGATGTTGGTACCAGATTATCGTGG
TGAAATTGGATCCAATAAACGAAAAATGGAGATCGACACTTACAAAGTTT
TTCTCGTGTTCTTAGAAACTGCGTTTAAAGATGGTAAGAAAATggaaatt
taagtttattaaattatatatgaatttaaatatacATTTTTAAGTAACGC
TGCGggaaatttcaattatttttggcAAACGAGTCACTGTCATATCCTGG
CTACTTTTTCCACCGATGTGCTCTATTTAAGTTTAGGATGGATGTAAGGA
AGAAACTGTTTTTGCAgctattatttgaaaaaattcttttttagaatcat
cGAAGATCAAACCAACGCAAATCATGGCAACCGTTACCGGTTGTGAAACA
GTTCCGCCGCTTGGTTTGCCGTTGAAGATTACTATCGATTTTGCTACCGA
TTGCAAGCCTTCTCCAGATGGCAAACCATGTGACTGCCTCCCTGTGTTTA
GCACTTGTGCTCTAAGCATACTTATCCCGACACATACAAAAACTTTAGAG
AAAATGGATGAATCGTTCGACAAAGCCTTTTCAATGGGAAAAGGTTTTCT
TCGTACATAGATCCCGATATGCACACAGTCCGGattttctcttttgttaa
tAGTTTTGGTTGATATTTACTCGAAAAACAACTGTTACTGGCTGTTTTCA
CAACTTCTATTATGTTATGTTATTTCATTGACAGTTATTGCAACATGATA
TCCAAAAACAgtttaaattttgtttaaaattctcttgtgaaatttgataa
aattcttGGAGGCGATATTTGGGATTTTCGCACTTGTTGAAAATCGGAAA
CTTTGCAATCTTGCCCAACCAAGTAGATACATAAATGTACCTTAAGTGTA
TTAAtcttggcggggattaaatctGGCAGATTTGGCGGTTTTtgaaattc
gccaaattaaatacccgccaaaattGATATATTTAAGGTATGTTACTTTT
TGTTAGGGGCATTGTGAGTTGAGGAGGTATCGAAATACCTGAATTAAACG
TNATTGCATTTTGGccaaccgccaaattaagtgcacgccaaaatttatat
ATTTAAGGTATATATGTTACTTTTTGTTAGGGGCATTATAAGTTGAGGAG
GTATCGAAATACCTGAATTAAATGTCTTGAAATTAAAtaagaatttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036122TCONS_00036122Clytia hemisphaericatranscript
TCONS_00036123TCONS_00036123Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036123-proteinTCONS_00036123-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001415supercontigsc0001415:832..11378 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15	0.09	0	0	1.59	1.41	0.73	0.85	0.63	1.36	0.96	0.72	0.56	0.77	0.04	0.12	0	0	0	0	0	0	0.04	0.13	1.47	1.81	0	0	0	0.14