XLOC_021149 (gene) - C. hemisphaerica

Overview
NameXLOC_021149
Unique NameXLOC_021149
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001399:237..5163-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021149 ID=XLOC_021149|Name=XLOC_021149|organism=Clytia hemisphaerica|type=gene|length=4927bp|location=Sequence derived from alignment at sc0001399:237..5163- (Clytia hemisphaerica)
TAGAAATATAACAAAATGTGATGAAAAATGAGCGATTTAGAAGCAAGGAT ACAAAATCTAAAACCTCTGGCAATAAACCCCGATAAATGCACTGTAGATC TGTCACTGTACGAGCAAATCAATCAAAATTCAAATGAGTTCCAAGATCGA CAGGCAAAACAGTTCAATCTGGGAAATGGCTTAAATTTTGGGACCCCTAT CAGTGCAGCTGAATACCTACTAAAGCGCGAATATGGTGAAACATTCCTTT TCGAAGAGGACTCCTCTAAAGCAATATTCATACCCCCAGAATTTATATCA AGTCAATACCTCAAAGCTGGTGATTCAAGTGTAACAGGAATGTTGGATTA TAATGTCAAAACAACCCTCACCACAACAAAAGAAAACCTCCTGAAGAATT TGCCAGATTTTTGGTTTACAAAGGAGTTTGATGCTTTCATGAGAAACAAT CAACTACAGAATCAACAATCTACCAGCACAGGTAATTCCCAGAGTCACAA TATTGATCAAACAGCTTTTGACAAGTGGAGATTCAATGCCAAAATTATGC ACCTGGTGATCGAGTTTTCAGGAACAAGTAATCTGAACCTTCCAGCAACC ACCGTTGTAAAGGACTCATTCATCCAAGGATGTTTATTGGAGCTCAATAC ATTGCCACCATGTCCAAAAAGACCAAACAACATGCAATACTTGGTAAAAA TTCTCCAAGGTAAAAATGGGAACACCAAGAAAAACATTATCAAACTCTAC AATGAAAATCCACCAACAAACAAAATGGCAAAAGCAGTTTTAGAGATAGA GTTATCAGACATCGGTGAACAATCGGAACATTCATTATTTGAGCAACTTT CCTCAAAAGCAGCAACAAAGATTCTGGAAAATGCAGTCGTGTTGAGTTCA GTCAACTTCCTGACAGATTTAAACAACAAACGTCACCAAGAATTCGATTC TGTCATCATCTTTTGGCAACGCAAATTGATCATTGGAGTGGAGATCAAAC GCCAGCTGTCAGCAAATACGACGGCGTTTAAACAGCTTAACAAGTATCAC AAGCAATTTGAGGAAAGATTAGGTGACCAGTTAGGTGATGGTTGGACTTT CTTCCCGACAATATACGTTCAAAATGACAACGGTTTGAGTGAAACTCAAC ATTTCATTAACACAAATTCTGATATTCCAACCTGGCTATCAAACATCATA AGCAGATTCCCAATAGCACCATGCCAAAAACCGTTTATCCATCCCCTAGA ACAGCTGAAAAAGGTATTTACGTAATATGACTTTGAGCCAAATCAGTACC GCAGAATTGTTAAACTTTCTCATTTTCGGGGAAACTTTCTTATTGCCACT TCACAACGGAAAAAGTCTCTGGGTAGTACAAAAGTAGCTTCAACTTATTA GGTGGTCAGTCTTAGATCCATACGCTCGCATGTTTACGCAACAAAATTTT TTTGCTGGCAAGCACGTAAAAAACAGCGGAAGGTTCCCGGGAATGCAACT GTAATGTTTCCCAGGAAATGAGAAAGTTTAAACTATCTTTGAAAGAAGTA ATTAAAACGAGAATCTTTTATATATAACAGGAACAGGAGGGCAAACCCTT AGTACCCGTGACATCTTTCATGCGACGAGACCAAACCTGGTCCATTTCAA AGAATGAAGTTTTCGCGAGGGGGTCTTTTTGGTAAGGTCTAGGAAAAATT TTAGGACTCAAAAACTGACGTCACAGGCAAAACCCATTGACCCCTAAAAT TTGACAAAATTTAAAAGTCAATAAAACCCAAAACCAATTAAACGAAAGCT CGAGAAAATTAACGTCAAAATTGACGTTTTTAAGTCATTTCCAATCGATT TACTTGAGTTACGTTGGGAAATAAACTAATTAATAAATAAACTAGTTATT AACGTTTAAATTTCCTCAAATTTCAGGGGTCAAGGGGTTTTGCCCCTGAC GTCAGTTTTTCTAATCAAAAAAATATTTCCTAGGCCTGAGAACCGAACCC CCCTCGCGAAAATTCTTTTAAATACTTTATTCTTTGAAATGGAGCAGGTT TGGTAGAGTTGCATAAAAGATGTCACGGGTTCTAAAGTCTGTCTCAAAAG TAAGTAGACACTTTAATTTTTGAGCATTTTCCCAGCATCCATTTATGCTA TATTAAAAAGTTATACACCGTTGGAAAGATATTTCCTAGGAAAATAATCT AAAGGATAAAAGATTTTTGAAAAATTGAAAAATGAAGAACAGAAATGAAA TGAAAAAATAAAGATTTTTCTACTTGTTCAAAAATCGTGACATCAGGGTA TTTAGAGAATTTAAACCTTGCTGATTTCAAATCTATGTTCAGATTTTTCG TACCTTTTTCTAAATAAAAAGTTACACCACTGTGAACTTGGTTGGCGAAC TTTTTTTTCCGTTTAAGGACATGTTTTTTAATTGTTTCGTTTTTGACATT TTCAAAAAAGCTAAATTTTGATTGGGGTAACTTGGAGGTCCGAAATTTTC ACAGGATGTTTGTAGTGATGATAGGACCCCAAAAAGTTCTTTTTCCAAAA TTCTAGCTGTTGTAGGGGCCATTTAGGAGCAAGTTTTAGCATTTGTATGT GTTTCGGAAAATGATCTAAATCAGAGCTAAAAACCCAGGAAGTTGTTTAT CTGACCAATGATTCTCATAGAGGGATGGCAATTAAAGCAGGCTATTGTTA AAAGGCCCACATTTTCCTATTGTGGGGCCCTTTTTAGAGCACCTTTTTAG CACATATTTCCCCATTGACAATAAGTGCCAAAACACCAAAGTAAAAGGCT TGATTGGATATAAGACTTCCATAACTTCTTTTAAAATAGTTGAATAATCA AGTTATTAACACCAATATAAAACTTGAGCTGTTAATGGGCCCGTTTGGAG CTAAATTTAGCATTTTCCCACTAAAAATACTGCAGCAGAATTACTAGTAT GTTTCTAAACACCCAATTAAAAGGCTGGAGTGGGTGTAAAACCTTCATAA CTTCCTTTGAAGTAGTTTAATAATCAAGTTATTATCACCAATAAAACATT TGAGCTGTTAAAGCGCCCGTTTGGAGCTAAATTTAGCATTTTCCACTGGA AATACTGCAATTTATTCGGCTTCTCTTACTAAAATTAACTTTACACCTAG TCTAATTTTTGCTAAATTCAGCTCATTTTGAGACCTAGGAACATAAAATA ACCTCATGAAGTTCTGTTCCATTGTGTATCAAACATTAATGATAACTTAT TTGATGTTTAAAACCTTTTCAGGGTCCAGAATCGAGCAAATATTTAACAT TTTTCGTTAGATGCTAAAATACTGCTCATTTTTGGTCCATTTAACTATGA CAAAGATCACAGAAAATACTTTTTAAGCTTCGTGAGTGATCCAAGCATCA AATAGCACCTAAATGAGCTATGAAATAACAATAACCTTTGGGTTATCAAG TTTTAGCATAAAGACATGGCCTTCAAGAACTCTAAGTCTAGTCAATGCTA AATTTTTGCTCGTAAAAGGACCCTGGAATGCTTTATATTGGCCAAATTTG GTTTTTCTATCTTTTTGAATGCCTCAAGTATGCATAATATCAATATCATA GTTCTTTTGTGTTTATCTTAACTGTGCTGGTGGATTAAAAAAAACCACAC CCAATGCTAAAAACATGCTCATAACTGGACCATACAACCATTTTTAGTGA TTGCTTATGTTGGTATATTGATCTTATAAGGTATAAAAAGGCATGCGCAA AGTATTAGAGTCATAGCAGAAATATTGAGAGAGATACAAGCCTCTAAATC CATATGCTAAGTATTTGCTCCTACTAAAATGCTAAGTATTGGCTCATTTT TGGACCGCACTTTGTTGAAGCATAAGTCATGACAGATTTAAGCTTTAGAA AAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTAAGCTTTAGAAAAAATTCTTTTAAATTTTTA AAGTTCATCTTTTCCACGCAACCATCATCAGGGCATAATTTTAGTTCATT CATTATATTAGAAATGAAGGATGATTTCCCAAGACCCCTAAAAACGAAAC AATTAAAAAACATGTCCTTAAGGCCTACTTCAAAGGGCTATAACTCTTTA TCCAAGAAAGATACGCAAGTCTTTTCCTATTCCTGAAAAAAAAATTTCAC GAGAAGATAAATTTTTTTCATTTACGATATCTGTAATTAAGCTCTTCCTC TCATCCCTAGATAAGTAAATATCTAAAACCTAATGACAAGGCAAATTAAA AGTAGAAGAATGTGCGTTTTGTGGTATGTATAATACGATTGAAATCAGTT TTTACGTTCCCTTTTTTGCCAGGTGCTTCAATTTATTGTTTTCACAATTC ATGTATCAAAGAAGAACCTCCCAGCACCGATCATCTCATCCAATTGGGTA GACTACATACAGAATGTCATGGACTCCCTATACACAGTGGATAATGTCAT CTTTTACTCAACGCAACAGTTGCCTATTCTGTCCTCTGAAGATACAAAGT ACAAGAAACTTTTGATAAAGGGTGGCTGGGGGACAGGTAAATCATTTTTG ATGATGGAGAAAGCAAAGTTGTTGAGCAAAGATGCGACGTACAAAGGGAA AATATTGTATGTTATATGGCGCCAGATGTCTTTTATAACACTTACAAACT GCAAGCCGTTACTTTATTATCAGTTGAAATCAGAATTGCCGCCAGATATC CACGTCATTGCAGTATGTATATTAACTCTGTTTTAGTTACTTTATTTTTT GGTTATTTAAAATTCAAGGGCTCTGACGTTAGTGAAGTTAGATGACTTTT GCTAGGTAAAAAGTATTACAATTTCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035992TCONS_00035992Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035992-proteinTCONS_00035992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001399supercontigsc0001399:237..5163 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.03 0.05 10.06 7.63 8.78 9.91 4.92 7.81 3.74 3.82 5.7 5.53 0.04 0.06 0.16 0.14 3.02 3.56 1.48 0.81 0.67 0.43 12.31 12.77 0.94 1.08 0.16 0.16