XLOC_020891 (gene) - C. hemisphaerica

Overview
NameXLOC_020891
Unique NameXLOC_020891
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001347:28751..35360+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020891 ID=XLOC_020891|Name=XLOC_020891|organism=Clytia hemisphaerica|type=gene|length=6610bp|location=Sequence derived from alignment at sc0001347:28751..35360+ (Clytia hemisphaerica)
AagacaaacaaaatggcggctCAGAATGGAGGGAAACCTGACCTGGCTGT CAAAATCTGCAGTGTTTGCCCTTCGAAGTTAGTTGCTGGCCATGATTTTA ACACCATTTCTAATATAACCTTTAGCAACATCAAATTGCTgggagatttt ttttcaattgaagTAAACGAGGAACAGTTAAAAAAAACAGATGCCAGGGT ATGCAGGAACtgcaaaaacaaattaaaaacaacagTAAGTAATGGAGTGG ATTACATTTTGTAGACAATGTCAAATGTCTCCTTCTGTCATTCGTAATTT TTGTTATGCGCCTTTATGTCACTAATCACTTAATCAGGNGTCTCATTCTG TCATTCGTAATTTTTGTTATGCGCCTTTATGTCACTAATCACTTAATCAG GCATGCTTAGAGTTTTATAACATAGCCTTGAAAGTGAACGGAGCGAGCTT GACTTCAGTCAATCAATTATATATCATTGCTCACTAAAGGTTCAAATCTC AGGTAGTGCAAGGGAATTGGTTAACTCTTTGCTTTGGTTCAACTTAGAGA TGAAAAATTTAGCCTTTATTTTCACTCAAGAGAAAATTAATCTAGATCTA TATTGATGTGACGAAAAGACTcaaaaacattataaaaatgagattgaaCC TGGGAGTGTCAATATATAAGAGATTTGACTTTGACCGTATTGACATTTAG CTAGGCAATGCTAGTTAAGAGCAACCTAGAGGCTACTCTAAGGCAATcgt tgatttattttttatctagaagTTTTCATGTATGTTTTGGCAAAAAggca ggaaaaaattaaaaattgaaaaacagaaaacaaaaaatatggtaaaataC TCAAACCTTAATGGACATATTATTAATAGCTGGAGGGTATATAATACTCA ACTTTTTACATTTCAGGTAAAGAAATTGAAGGAGGCACCTGATCTTCTAG CCAAAGTGCGTAAAGGGTGCATTGAAAATCCAGCAACATCCTCTGAGCCA TCAAATTATACTCAATCACCAAATAGTCCCCATTCATCAAGTTCCCAACC TCAACCTACAACGACTTTTCACCCAAACATTCCACCAGCTGATGATAACG CGTCACATAGCTATATCTATTTATCTTGGCCAAGTGGTAACAGATGGAAA GAGGTAGATATAACTTATATACAAATAACCGATGCAGATTAAAACATAAG TTTTCTCCTTcagattggaaaattttctgaatGGCCTAATTTTATATCGA CAAAAAGACAATCTTGattacttttcatttttactttagcTAAATCCAGT CCTGCAAAATGTTTCTACAAAGCTTTTGAGAGGGACATACACTGATTTAG CCAAGGCGGTATGGACAACTCCTGTATTGAAGGAGGCAATCATCCCACTA GTTCTAAAAGATGTTAACAAGGAATGTGTATCGATTTGTAGCGAAAAGGT AAGCAGAACCTTTTTCTTGTCATAGTTCGTAccccttttctttttttctt tcttgtgaaGATTACGTGCAATATTTTCTGAAGGATTGAAATCTTTTACT TTAAGGTCTGGATTAATGGTGAGAAAAAAGCTCGTCGAAGTGTGTTGAAA AAGACAACCAAAGAAGACCTTCTCCAATTTTCAATTGAAGATGTAGTTAA CGAGTTAAAGGAGAGATGCCCAATGCTAACGTCCATTTTATTGACAGCTT CAACTACAAAGAGGGGTACCATCAATGATACCATGAAACCCAGTGTGATA AATACTCTGTGCATGTCTGCAGCCGTGCTTCTGAAAAATCGATCCCCGAA AATGACAGCTCTACAGCTGTACATTTCTTTAATGTTGAATCACTCATCTT ACTCGGTAATCATTTATTCATACCACAATAACTCATGATACAAAAACTCT ATGTATatccaaaatcaattttgatttatcaCAATATGACATTTGAATTT GctaaagttgatttttttctgttgatCTATAAACAATGAAATATGTTTCA AATATCTTTATTTATAGTCTTCGATGATTCGTATGAAAACCTTGCGTATT TGTGTCACTCCCCAGTTTTTAAACCGAAAAATGGATGAACTTGGAAAGGA TCATGACAAACCACTCAAACGATTAAAGAAGAAGAGAGAAGAACTTTTGG AACAAGAACATGAAGTGATTGCTATTCCACTTTTAGAAGGTTACAAGCAG CCAGAAGCAGATCGTAACACAAATCATCAGGATTCCCTACACTTGGCTGA AAAATTCAGGAGTAGGCTTCAAGCACCGGATTTGAGTACTGATTCGATCT CTTTAggtaaaatatgaataaatttttttctgatttcaaaaGATTGAAGG AAATGATTTTAATTCGAATCCTTACAAAAGTATTATCAGTCTTGAAAATG TTGAGCATATCACCTCAAAGTAAGATTgatctaaaatttaaaatcccCCT ATTTTTATTTGACCCCCCTATAAACTGAAACCCCACCCCCTAGAAATCCc cttcaaaaacttttcatcCCCTATTAAAAATGGGGGTTCACATTATGTCT ATTTATGACTATATATTATTTATACTCTTTATTGCTATTTGTTTACTTAT GTGCAAAGCTTTTTTATCATGGTAGGACATTTATATCATAGCCTGCTGCG ATAATAATATTGATAAGTCACTTAGTCATAAGTGACAAGCATAATGGATG AAAACCCTTACAGATTTACGAATGAATGATGCCTTCTTAAATTAgcaaat gtttttattattttcagataTTCAATATACAAATGGTTCactaaaagaca aagaaaacacAATAGTAGAAGGTATTTACAACTTAAAAGTTAATCAAGTT AATCAGGTGCATTTTAATGAGTCCTTCCTTCTTTCTTGTTGAATGTTTCA ATGTCTGAGTCAAAGTCAAGCTGTTTAATCTTTTATAACCTGCATAACTT TTCCCGTAGATACAACCAAGAATCCAGATAAAGAGGACATTACTGTCAAT AGAGAGAACAGTTCTAACAAAGGAAAAGGTAGGTTTTTTGCAATCTTTGA TTCTATGTTTAATTTTGTAGAGCACTTACTTcaggctgggcttaaaaaat tgttagtTTGCCGTCACCGACCCTAGATTTTtgaggtgggtcggtcggaa ttttttatattttgccgatttatgaaatttttgtctATGAAAGGGTTAAC AGtgtgtttacatttaggtaattttgaataaaaacagaagtgctagcagg gaatttacgattctataatgcttgagacaaacaagataccagttttgatt ttttattatttgaagtttttaaaggaaaaaaattaaatcttcTTTGAAAT ACATTTATTTACTAGATGTTGACTTTTCAACAGTCTCCACTTCGACGCCA CACTGCTCAAAATTACGTGATCGTAATCCAGAACTTGGTAGCAAAAGCAA TTGTAAGTAAAAACACTTGCTTATTTCTTATTTACTgtacaaaaaataaa acttgtcaTATTTTTGGAGAAACTATTTAGTAAAACATAAGTCAGTGtca ttcttcttttttgatggtCTTGATTCATTATTGAAAActattgaaatata tttttttagttcACAATTACAAGTCTGTAATAGACAACGTCGATACGCAT GTCAAAGTAAGTGAGATGAACGAAGACAACCAAAATATCGATTTACACCA CACAGCAAAAATGGTTGTTGTTAATCGTGTTTGTGGTGACCACTTGTCTG ACGAGAAGCCCTTCATACCCCTTAGTGACCTTACTCATGGTGAGCTTGTT TGCTCTGGGGTCGATCACATGAAGCAGCGACTCAATTACATGACACTTGT TGGGAGGATAATCACATCCAACTTAGACTgtcttgaagatttttcaagtg aAGTCATCAAACACATTCCCCATGACTACAGCAAGGAGATGTCTcaaaag tctgaaaatgtaATAATTTTTGTGCCTTGCTTTTCGTTGGCTATGTTGAT TTGAAATGATGTGTTAAATATTATAATCTTAGTCACTTGAAAAAGACAAC ACGTCAAATATATGCTACCTACTTTTTAATTTTCCCTTTTGATGTGGTAG TTTTGGAAGTATTTACCTAAgttgaaattcttttctttgtaGTGCTTTTT AGGAATGATATACGAGAACGAAAATACAACTGAAGGAATGATAAAAGTCC TCAAAGATCTTCAACAAAACCAGCCAGCCTATGGTGAAGGAGCTGATAAA ATATGCTACAATCATGCTGTTGCAGGTGACCAGTTGACCATTGAAAGAGC ACTAAATGCCGCTTTCCTGTGTGCCAATGGTTTTGAACCTGAGGAAAGGT TTGAAGGCCTACATTACGAAGTAGCTGATTTTCATGCTGACATTAAAATA ATGCAGGTTCGTTTGTCTCAATATAAATTGTTTTCAGTTATAAGCTTTTT GACAAAGAATGTAATTaactttgttttttgatttatttcataAACTAAAA CATGTTCATACCCTATAATTCTGACAACTTAGACATCTTGGTCTTTAAAG AAACTTTGTTTGTCCTTACTCGTTTGAACCAAAACCCACACACCcctaaa aaaaattcacacaaatatttacaaaaacattttttaccgagaaaaaaaaa aaaatcgaaaatgtcAAACTTCCagtaagataatttttttatttcttata tattttttttgttacttttagTATATTTGGgatcattttttcaaagtatc cTCTCAGGACAAGTGCACCCTTGGAGCTGATAAGGTTCTCATCAATAGAA GGAATCTATGTTCCGAGGTGAAGAAACGTGTCTCTGCAACAAAGCAATTT ATGCTCATTGAACTTAGATCACGTATTATCGCTGCAGCAATGGAGAAGCT TGGTCTAAGTAGTATGGATGAAACGAAAGATCTTAATGAACACAAATCCA ATAAAGATTCTAAAAAGAAGTaattttatgtgttttttttttacttctta cTTGAttatgcttttttttataagcatacagtaAAATCATCCGGataatt atgcaaaatttcGTTTCATGCTTTATTGCATGCTTAGCAGAGTAAAGTCG AAAGGTTCGTTAATCTtggtacaaaaaaatatttatttttgagtttttag tatttttgagtgtacacttttaatttttagaaGAGGAAAATAGTTTAATA CattatttcttcaaattttcaggTTCCTTGAAACTCTTTGTGGAGAAATC GTTGACAAGTTTGTATTGGTTTCCTCAACTGCTGAGCAACATCTGACCAA TTTGCAAATGGCTTCGAAAGTAGTTGATGGTAAATTTGAATGCAGAGCTG AGGGCTGCCAAAAATGTTTCCAGAAGGATGGAAAAGCTAAGGAGAACCAT GAAGTAAAAGAACATGGATTAAAACCACTGGTAAGTtattcattattatt attattattattgttattgttattattcCTATTTTGAATACTAAATAAAA GTTCACAAGGAAAAAATAGTttcaggagaaaaaaaaagttcataGTGTAC ATGAATTAATCTAAGGTAATTTATTTACAGGAGGACGAAGATGGGAAGCT CAACTACCAAACCAGTCTGTTGGAAATTCTACTTTTGTGGCACAATTTCA ATGACTCGGTTAGTGAAGGTGATGGAGAGAGAACAGTTCGTTGTAGGAAA TTCCTCTTTCCTTATTTTTTACAAGACGGACCTGGCAGCCGTAAATATGC CTTAGAAACGTTTTATCTCTtgcttcaaatcaattcacttcTCCCACAAC GCATCGCACACGAAATGATTTGGAATAGAACAGCTAAAAACAAAACTGGA AAAGGTATATATTGATTTCCTTGCTCAAAATTGCTTTCTTCTCATAATCT AAGATAGCCATCTATAGTCTAACCTAAAGAGTCTTATTGGTTTCAAACAT TAATCTTCATCAGTTTAATAAAAGGGGTACCCTCTAGTTTGACCCAGTTA TTTTTGGGTCTGGTGGTGATAGAATTGGTACAATTTCAGTACATGATAGG TATATTGTGATTTgataaaatagtttttttaattGCCCTTCCAAAATTGA CCACATGTTAGATGATTTAGGTCAATCTTCTTATTGTTAACGGATACTAA AAATCTGAGCCTTAGCCAAAGTTTTTtggttctttaaagaaaaaatgtgt gAAAGGATATTTTAAACACACAAAGATAAGTTTAGAGtgaatgatatttt tttcatcGAACAATATTCTATTTAATTTTAGGTGGAAATATCCCACTTGA TTTGGAGATGGAGCATTGCATccgaatcatcaaaaacatcaagcGTAGAT TGGGTCCAAATGCCCTCAACCGACACATTATGGATCAATATTGCAAAGCC CTGAACGTCAACAAGCAATTATGTACCAACATTGACCAAATGACAGGAAT CATCAGACGTTCAGGCAAGCATACcaaaaaaagtgacaaaaatgacTTGG AGAAACTTGTTGGCgagttactttcagaaaaggTGTTTCGTTCGGAAGCT GGTAGAAACTACAACCACTTCAATATGACAAAAAGTTTACTAACAAACTA GAACTTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035659TCONS_00035659Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035659-proteinTCONS_00035659-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001347supercontigsc0001347:28751..35360 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.05 0 0.03 0.98 0.81 0.74 0.49 0.41 0.55 0.19 0.69 0.33 0.51 0.52 0.69 0.25 0.51 0.25 0.18 0.21 0.24 0.32 0.5 0.45 0.52 0.29 0.13 0.11 0.11