XLOC_020683 (gene) - C. hemisphaerica

Overview
NameXLOC_020683
Unique NameXLOC_020683
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001308:59099..65317+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020683 ID=XLOC_020683|Name=XLOC_020683|organism=Clytia hemisphaerica|type=gene|length=6219bp|location=Sequence derived from alignment at sc0001308:59099..65317+ (Clytia hemisphaerica)
TTTAGACAAATAATAAAGTCACAAAATGAAATTATATGTTTGATTGAAAT AATGAATCTTGAAGGATTGCGTTCTACGTTTATCAACGTTTTCGACACAC AAGAACTGGTAGAAACTCTGATGGACAAGTTACCATTTGGCAAGGATGAA TTCAAAATCATATCAGTTAATGGCTCAGTCAAGAGGTTAAAGGCAAATAT AGATTGTAAATTGATAAATCTGGAcagttttattcaaaattataaTGAGA AAACAGATGAAACATTACGAGTATCTTCAACCAGGAAGCAATCTGATAAA AGTTTATATGAAAAGTATATTTATTTGAGATGTCACCACAAAACTCGGTA CACCAAAACAAATCCTGAACTCATAAGGAAACAAAAACCGTCTAAGAGAT TTAAAAACACAGACTGTCCGTTTTCATTgtgcttgaaattcaaaaaacac AATGATACCACCTCCCATGACTTCAACTGTAACATTAACCTTGAATGGAA TCACAACCATCCAACTCGCTCTTTACAAGCACTCTCATTCAAGGACATTC AAAAGTCAACTCAGGCAGATATTGCTAAGCTGTTCGATCAAGGCTTCACT CCGGGTCCAGCTTATCGCGAATTTTGGAGACTGATCAAAGAGGTTTGCTC TAATGAGCTTGAGTTACACAAATTGACATCAGATCGCTCACGATTCCCGA GACGAACAGATTTTAACAAATTATTCACTGATTACCACAGACAAAAGTTT GGAAGCAAAGATTTAGAGTCCATGTTTCGAGTTTTGGGCTGTAAGTATAA TATTTGTGTAAGATTGAaccttttttatgtttttaaaaaggcAAAACCAT ATTAATAGCCTTTGTAAACTAATGAAAGCTCTCCttctatttatattttt ttaggtAAAGAAATTAACTAGTAGGGGGATATCTTTACTCCTAACTTGAA AATCTGTATTATCATGTATTACAATGAATTACAACAATCTATTTATAGCT TTGGTTGAGAAATTGAAAAACGAAGAGCCAGAATCCATCATAAATTTTCA GAAGTTCGATGCTGCGGAGGATGATCCTTTCATATTAGTTATTGTCACTG GGTTGATGCTAAGGGTTCATAAAACGGTAACTATTAATCTCACATTTGAA TAATATAGAGTAAAACCTGATTTATATTAGTCTAATAATTAAAAAGCAGG CATTTTATTAGGTCCTTAGAATTAATAATGCAACCTTTTTGTCATATACT AAATCGGATCGATCGATTGGATAAAAAACCTAAAGTTTAGAGAGTACAAA CTTGTAGCTTGTTTACTGTATatatcaaaataatataaacaaagatatat aaaaatatataagtaTAAAAACGTTTTCCTTGGGATtcttattttgaata ataaaagaaaaaaagaatgacattgttctttttttttagcttaaaaCCTC ATCAGAAATGATTTTTGTTGATTCAAGTGGTGGGATGGAGGAGTATAATC TTCGAGTTTTCTTGGTTGTGACACATTCATTCAGTGGTGCCTTACCTCTT GGGGTAATAGTAACTAGTGATGAAACGACAGAGACACTAACAAGggcatt tgaaatgttttcttcACTTCTACCAGGTAGTTTTTAGTGTAAATTTTGTC CATGAAGCAACAGTACTtgcaaatattttcatttccaCACTTTTCTGTAA GCCAAAGAAACAGCTCTGgtacaaaatcatcaaaatgattttaaagagtT TCGAGTCAATAACTaaaacaattttatttaaattgtTTAGATTATGCGTT CTACAGCAGCCGTTCTGGACCTGGCATTGTCATGACTGATAATTGTGGCG AGTTGCATGATGCTTTGCATGCTATCTGGCCTATGGCACGTTTACTGTTG TGTTTTTTCCACATCATGCAGCAAGTGTGGCGCTGGCTTTttgacaaaaa caacaaaatttcacaAGTAGATAGACCAGGTAAATAATGTAATTGCTCTC ACTTTTAAGTTAAAGTTTGTGTAAGTAGGTAAGAATTGATTTTCAGGTGA CAACatgatatgaaaaaagtttaacttatttaaattgaaattcaaaatta caaaatttatatttcataTCGCAAACTGAATAAGGAACACTCTACTATTG CTTGTACACCAGCAGTGATCCCCACCCCTTGAATGTACTGTACTAAATTT ATTGTCTACataattactcaattttttacaGAAATCATACAGATGTTTCG AAATATtgtttattgttctaatgaagATATGGTGGATACTTCAGTCACCG AAATCAATGAAGCATATGGACAGAAATATAAGAATCTTCAGGCCTACATG AACACGCTGTTTGAGTACAAAGAACGTTGGTGTTTGGCCTACCGTCAGAA TTTATTAACAAGGGGCAACAACACCAACAACTTTGTCGAGGCCCAGTTTC TTGTCCTTAAGGATAATGTCCTTAATAGAACCAAAGAGGTAATAATACTT AATACAAGCAATAAATCCTGTACCCTTTTTGAGCACTAAAAACAGTTACT CTACAGCTATTTAAATTTCGGTTTAAGTTACGTTATTTCTGGTGAATTTA ATCAGCCATTTACAATAGAACGTATCTTCTATCCCTTTTTAGATCAACAT CAATGGGCTTATCCAAAAGTTGGTggaagatttcaacgaccatttcaAGG TCAAACTTATTAGCATTGCTAATGGTCGCTACGATGGAGTATACAGTAAA AGATTTAAAGGTGGGATATCATTCATTCCGGCTTCATtcatttctttcat ttattCTCATTTAACGATTGAAACGCTACTAAGTTAGTGATCAGTATGGT GCAACCAGGTACGAACCcgtaattttctaatttttacagGTTTATCGAAG GATAAAAAATCGTCCATTGGATTCAGATTACCGTCTCAAGCCGAGCTCGA TTTATTGGTACAAAAGATTGTTGATCGTGGAGCAGGTTCCTATCTAGTTC CCAGTTTTAAAAATCAAGAGTCGTTTTACTTCGTTGACACTGACCTTGGC GTATGTGAATGTGAAGTTGGCAGATATGGAACTCCTTGCAAACACCAATA TCTTATATGGACGCATGGTCTGAAGAGTAACAATTTTCTACCATATTTGA GTTGTGAGGAGAGAAAGAAATGTTCGTATATAGCTATCGGGAAAGTGTTG GAAGATGAATTGTACGAAAGCATTCACGACCATTTAGACCAAGATCCACA AGGAAACAATCTAGAGAGGTTATTTAAATTacattttataatttcaaact ttttggacGGTActttaaagccttaaaatattattaataaTAAACTAAAT AGCATAATATAATATTAATTTCTACCAGGATCGCTGTGTATCAACTATAC TCAAGCTTTGCGAATTTTTTTATGCGCTACGCCTAAAATACCGTTTGTGC AACAGCAACATTCTCTACTTTTTAGAGTTGATCAAGTCACCTGTCCTTCT GATAGTTCGACTGTTGACACCGCACATGTTGGTTCAATAGAAGTCACAAA TGAAAGTCATTGTAAGTTTGGTTGGATTATTGACCTTAGCCATAGTGTGA ACCCCCTTTCTAAAGGGTGGGGTGGAGCCTTCCAAAAATCACCAAAGGGG AGGGGTAGATTTTCAAAGGGAAgggtaaaaaaattttataCGGAAATTCA CGAAAAGATGATTGtaattctttcaaaaatctttaatcTTTTACCATTct cctaaaaacatatttttaactTAATAAACTGATGAAATTATTAGAATTAG GGGGGCCCCCCCTAATTATGACCAGGTTCTTTATCAAATTGACAATGACA CTCTAATTAGCgggaatttttcttcttctcttcTAAGTACTGTACAGtat ttttttaaccctttgagcgcgcagtagttttgaaaaagttgaaaaatttc aatgattttcttttttaaacttgaaaattcaaaatggcgtaaaagcttgt agcttttgatttagacactcgttttggtaccattggaatggtaattttgt actctttcaaaaagcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGG TCCACGCATGTTTTTGTATTTGTAGATGATTCCAGACGAACTATCGAAAC AACATCGTTCGATGATGCTCAAGAAGCCGTTTCAGATATCCATCAAGCAC TGTCAAGAATTATTGAGAGTCATAAGAATAACCGACAGCTCCTTCAAGGA GTACTAAAATTTCAGAATcgtttgaaaaaatactctCAACAGCCATCAAA ATTGACATCTGCATTCCACACGTTTGGTAGTGTATCTCATTACCGCAGTC GCAAACAAACTGGTACCTCAATGGTCAAGAAACAGCAGGGGAAAATCCGA GTTCAACCTGCTGCGGTTACAAGACGCGTAACTAAAAATGGAAGTAAAAC TGCAATTGTGAAGGGAATGAACAAAAGGAATCCATTTGAGAATAAAACTG TCGCTAAAAAAAGGCCTCACAATCTTGCTCAGAATATTGAGAGACTAGAG CCAGTTCCAAAAAAAGCGGAAAAATAACATTTTGTTGTAAGTTTGGGATT GAAAATTGCTGGAGatgtttcattttatattttaacacttgtttttgttg attatcACTTAATCTAACTATACGCtctctcaaaaatatcaaaatattaa aaggGAAATCCCCCAGTCCCTAGATCTTTTATCGACTCCCTAATTTGAAC ATTGCCACTATATATTTTCACCTTGTCGTCAGTTTACCCTGAtgttttcc tgaattttttcgCGGTCATTAGACCAATTGAATTAGCATTTAGATTGATA AAGagaagaattttcttttttaatgaagaAATCATGTAAAAAGTATACGG ACAAATATATATCCTCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035391TCONS_00035391Clytia hemisphaericatranscript
TCONS_00035392TCONS_00035392Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035392-proteinTCONS_00035392-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001308supercontigsc0001308:59099..65317 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34 0.43 0.11 0.06 5.16 4.31 3.14 3.22 2 2.42 1.77 1.86 1.35 1.61 0.99 1.43 1.16 1.11 1.76 2.26 1.51 1.37 0.97 0.84 1.01 1.16 2.36 2.19 2.07 1.22