XLOC_016701 (gene) - C. hemisphaerica

Overview
NameXLOC_016701
Unique NameXLOC_016701
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000736:18786..26179+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016701 ID=XLOC_016701|Name=XLOC_016701|organism=Clytia hemisphaerica|type=gene|length=7394bp|location=Sequence derived from alignment at sc0000736:18786..26179+ (Clytia hemisphaerica)
ATGCTAGATTACAACCAAACGATATCAAATTAACTTATTTGTCTGATTTT TATTTGTGTTCGTTTAGATCGATGTGTTCCACTGAAACGGGGAATTTGTG TTTGCGGTTCTTCTCAGTATGAGACAATTGTTAAACAAGGAATTGTTGTA GTCATAACAATGAAAGGCAAGTTACTTTCTTATTTAAACGGGTTTTTATT AGTTTCCATTATAAAATAAGTTTATTTTCCCTCAAATTGCTTTCTCTTTT ACTCTAGGAAAGTTTGAATTGCTGCCATTCTTGATCAAATGCAATCAATG TCATCAGTTAAATGACCCATTTGACATTGACAATATCCTTTCGTCTGGTT TTTGGCCATCGTCCCCGAAAAACTTTGGTTGTTTGGTCAGTGAAGAAGTT TTCCTTACGTGGGATCAATTTCGCAAGCATATGCCTGGTTCCTCGTGCAA TTTGTTTTTGGAATCGTTAAATGATTTGACTTTACATTTTGGAAGGGTAT ATCGAATTCTTTGTGCAATTTTATATTAGATTTGATGATATAGACTATAA CTCGCAGCCTCAACTACatgatgtttctttttttttgtgtgtGTGCAGAG GTACcccttttgaaattaaaaaaacgaAGAGGCTGTACATTCTtatgttt atttaatttttcactttcgttaCAAAGCTTTCAAACAGGATTAAAGCAGA cgatttaaaaagtttttttcgaatCACGAAACAATAATTtacattttgtt ttcttttctttcaagaaGAATTGAGGTCAAAATCATTTGACCTGCCTGAA AATTTTTAGTGGCTTATTTTCTTTTCGCGAACactaattttcgcagtttt ttgtactttttgtcGCTAAATATTTATTGGAAAATGTTCCATTACCTGTA GGAAAATACGAAAATTTAGTTCGGCTAAATTTGCAATTTCAGGGGCTTCC AAtcacgaaaattagtttccttaaGGTAGATGCTTTTGGGTTTTCATTAT GTTCTCCATTGttctgtctttttttttctagcAAGGAAGAATCGTGCCGT CATCTTTTTCACTATCGTTCAAACATTGGAACCTAGTCAAATACGAGTTA AATATGATGAAAGGAATGGATTGGATGAAGTGTCCATGTTGTTCCATTAA GCAGCATGCTTGTCATGTTGATGGCAATGCAAAACTTTACCGCTACCGCC ATTCTGGAAGGTATGTAGTTTTGGTTGTATCTTAATCAATGATAATTCAC TTAAGTGCTTAAATTTAAGCATTAAATGGATTTAAACGACCCGGGACACT TTTATTCCACCCCTGTTATTagtttctgaaaaaaattccaacctccCTGT TTTTTCCTGACCCCCACCTTTAGACCCGACAGTTTTTCACCAATTTTGCA ATCCAAGGCATTTCATTTTAAATCCTTAATTTTAAGCACTTCCCTTTTTC CTTCGTGAAAAGATAATTTCTTTCAACGCCCAAACTTCAGAGATTACTAC TTTGACTGAACTTTCTGTTTTATTGGCCTTGTAGTTTTACAAGCTGCTGT tgtaaaaagaaagaagaaaagtcattagtcataaaaaattgaatttttac aattttatgaTGCTACCAAATTGTTGTAAAAAGTACAAATTATTAATGAA TATCTGAAtgaatttctaataaaaaactcTGTTGAGAAAAGTGCTTATTG TAATTTGGTTTTCAGCCGACGCCGAGAATCATACTACAAGGAATCATTCA TAGTTGACGACACGAAGGTGGACAAATACATATCTTCACTTGATAAAGGA AAAGTTTTAAAGGTGATTTGTCATTATCCGTTATACTTTAGTTGTCAGCC TGCTTTCAAATTATTCGATCAAATGTTAGAGCACACAGTCAAATCCTTCT TGGTTTGTTGCTTTGTTACTACAGTTGAACTCGTGTAAATCGAATTTTCA AGGGACCGAagatttagttcgaattatatgAGTTTGGATTTTGACTTTgc ttttcaaatttagaaagaaAATACTACTGGTTTATGACATtttaaatttg tcatttttttcaagcCTTATATGATACAACTGCAGTATATACCTTGAATA ACTAGAAATTTCAGTTCTTTGGAAAAAAGTCGACGTCATTGCTCAGTTTC TTCTAAGATGACCTTTTCGGCATAGTAGTGTGCAGAGTGGACTAAACCCC TTTTTTTATTTACCCTTTACccttatattatatatattataccccccccc ccttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccat tttcaCCAATCTACTAAACCATATGTAATCAGTTTTATAAGTAAAAGCAC TACACTGTTTCATAAACTATAGTATAAACCAAAGAAAAGTGAGAATCTTA TGCCATACTTTGCCACTTGTGATCTTATATACGTTATTGACATTAATCAG TACAAGATATAATACTATTTTGACCAAATATTTGTTATCCCCTCTATAAA CTCAAACCCCCGTTGTTAAGAAAATCTCCCATCTCATGTTTGCTCATCAT AGATGGTAATGATATGGATTACACTCACAACAGGGCATTTCTCTTGAGAA CTTATGTTTTCGTgcgtttgattaaaaaaaatcgaaGAATGTCAAAGAat ttgacatggatcaaagtttGGTGAATGGCACAAagattttgttcgaatta tatgAGTTTTTGAATTGTATAAGGAGTTCGAATTACGTTTAACTGTATTc actaaaattcaaattttagggTCCATCAGATACATCTTGTGGAGGTGAAT GGTCAGCCGCACGCAATACGGAACGGAAAAGAAAATCGGTTGACTATACT GGTCTATACGTTGCCACATGTCGCCATCAGTATGGTCTGAAATCTGTCAA TATGAAACGTGGCGAGATTTATGCATACCCAGCGTATTTGTTAACAACAT TTATTTTGCCAAACAACGTGGAATTTCTCTTTGCAGATGTCATGTGCAAA TTGTGGATTTACCTTTCAAAACTCGATCCTTCTCTCACATCTAAAATCAA AGGTGCTCTGAGTGTAATGCATGCTAAAGGACACAACCTAAATTGTCAGG TAGctttacttttttataaaattctgTTACAGATTTAGTCATCCTTATTT ATTACCCATTTGGCGCGTTAGTAAAAAAATTCGAGTATTCCTCTAGCGCT ATTCAATGTTTTTATTCCAGTAATTACTCTTTTAAGGCTTAATTGTAGGT AGGTAAAGTAATTCTgtattttttctgtattttcactaTCTGCCCACCTC CATTTTAAGAAATTGTGAATGAGTGACTACCCAGCCCTTTGCTGCCGATG CAATAGAGTTTTAAAAAGGTAGTTTTATACGGTCATCAATTGTTATGCTT TCAATTAGGTCAATTGGGATGGTCAATGGATTCAAGGCACTGGAAAGTCT ACTGGAGAAGAATGCGAACAACTTTTTTCATATCTCTCACGCTGCGCAAA CACCACGAAATATCAGACACCTGAAAGTTAGGATTATTCTTTCTATAAAA TTTGGACGATTTGATTTGGATGTTATTTTCTTGGATCTGCTTGGGATCGA TACGTTCAATATTCAACTGTTTTCTTTTCTAGTACCAAATGTCTCAAATC AGCCTGTAATGCACGCGGGTTCACTCAAAGTAGGATAGTCCAATTAAGTA AACATTTTGTGAGGAAATAATATTAAATTCGCATAAATCCTATTGTTGAA CCTCTTAGATCGTGAAGAGACACTTACTGAAATGGTTATGTTCTGGAACA GACGAAAAACATTGAATCTTGCTGAGAATCTTCGAAAGAAATACAACCGG GTATGTTCTCATTTGTGCTGTAGATCGAAATAATTTATTTCGAAAGCCAT TAGCGGATGCACACTTTTTTATACgcaaccgagttgctaaggGACCAGCc ctgaaaatgaccaaaaactaAGCAAGGCTTGACAACCAATCCTTGAGACT AGGAAAGTAAATAAAAGTccctaaaaagatgtgtttttCAATAGTTTTGC GTTAAAAAGCACATTATAGGTACATTTTTATGTAATTTAGGTGAACAATG TGataaaatcccaaaattttaaaaattgcgAAGCATTTCGGGCTAAAAAT TTATAAGCAACATTTAGtctgaaattctgaaaattcATAGCAATCACAGC CTTGAGCTTGAAATTTAGATTCATTTAAAGCATATGTGTCATTATATGGG TCATTTCTAGATGTTATATTTCATTTCACAATTATTATTCTTAGGTGACA AGAGAAGTGTCGAGTTTCACCTCAAAGTTGAATAACAAATGTCTGGAAAT GAATATATCCATCGAGAATGTCGATTTCGTATCCCTCATGAATAAACTAA AGAGTTTCGCTCATGGAGGTATGGTGTACATATTCAGAATTCTCGATCTT TCTTTTGGTTTATTTTAAGACATAAGATACTAATAATTTGACTCTATAAT ATTTCCTTCATAAGGATTTATACGAATGAAAACTTtcacaatcttttaaa tatGTGTTAAGAAGGATCGCACAAGCAAGAAttgttaaatgtttttatta ctTGTATTGTTttcttctctctctctctagGCTCTTTATCACCCGCAAAA CCAACACCTCTCCAGCAAATGATACTCTTGGAGCATGATCTTAAACAATA TCCATCTTGTGCATCACAGAATTCGAAAGACTTACTCCAGAAGATATCAT TACCTGATCTAACGAACCTTAAAATTCCTCTACTGGCGAAGAGCAAGTCT GAAAAAGAATCACTTTTATCCACTACTTGGGATAATAAAATAAGTACTCA ACTGATGAATTGGGAACTCGAGACTTTGAAAAGCACCGTTCTTGTCCCTG CTTTCCAAAATGCAATACATTCGTGTCGCTTCGAAATGCTTGATTGGAAT ATAAAGTTGGAGAAATATGCAGGTTTTATGCTTTCGTTAATTACAATACC TACGTTAACTATAATTGCCGGATTGAAATAAATACATCCCTGTtggaaaa tcactaaaaaagaCAGTGATATTATGAATAATTCAGGCCATGGAAGGATG TTTgaggaaatttttcaaaaaactaataaagagtttggaataagaatgtc ctggatTAAAAATGATGACATCTATTAGATACCTAAGAGTACAGGACCTT ATCGGTCAATCCTTCAATCCTCCAGACCCACAGAAAAAACACGATTTATg caaaaaaatgctttaaatgataaaaattaaaatgacattcccttaaaatc tttctttataGACTCGGCAAAACTAAGAAATACATGTCGATCAAAATACG CTGAAGTTAACAAGAAGCTGAAGTCGCTTATGGAACGTTTTATAACAATA AAATCTTGTGAAGCTGACTGCGAGTTCGAACTGATTAAAGGTGAAGTATA TACCCTGTGTATTCTTTTTTTTCGGGTAATTTTGCTGTAAACCTCATGTA cgtttaaaaaaaggtttaaaaaagtgTACATTGACTATGCGAACTGTATA TTTACTATAGGTGAATAAAtataatacttttttttatatataacatAGTA AGTTTGGCCAAGAttttctttcgtaaatttcgTTTATTTGCAGTCTTGTG TTGCACAGATTGGTGCCAATACAGGTTATGGTCATTTTTAATTCCAAAAC TTTCTCTTTATCAGAGTCTAATCATCGACAACTACTGGAATGGGATGCAA AGAGAAAACGCTGCCACGAAGAAATTGATTTATTGAAGAGAGATATGGAA TCTTATCTAACGTTTTACTCGTCAAAAATCACAGAGTTGAATGCTACCAT CGATGCTAGTGTTGTCTTTGAAAAGGTACAcatgttttataagaattaca AGGTTCAACATATTTTTGGAATCGTACAGCTTTGGCTCAAATGGTTCAAG CTAATGTTTCAAGCTAATGTTTCCTTCATTCTATTTGGTATTTATCCTTT AGGTTGTTTTGAGCAAAGTGTAGGGAAAAATAAGCTTTCGAAACTAATTT GATCGAATGCGCATTAATATTTCTTGCGTTTTAACCTTCTTTTAAGAACC TAAAAGTTCTTCGACAAACCAATTTTAAACCCATCCTTagggaaaaaaaa caaagcaagCAAGAGATATTTTGTAGATATTTTGCTGTCAAAATCAGATA TAGATATTATATTTGAATTCCATCTTAGGCTAATGATCTTGGTGTGAATG CTTTGACGCGGATTGGAATTGATTTTGCTCGGAAACAGTTGCAAAAAGGA TTCGCTTGTTTTGTTTCAATTCTCCCACTAGAGCGGATGCAATACTTTAA AACAATCACTGGATTGGATGAGATAGACGAGCACTACCGTGTtttagaag aagaagaaaacgaagagtacGAGGTAGAGGAAGCAACAGTTACCGAAATC GAAAGAGAAAATGAACTGGCCTTCGAAATCGATCAAATTGACCTCGAACT GAACATGGAAACAGTAAATTCTCTGGGACTTGACTTATTAGGATACTTTG AACTTGGTCAATGTACACAGGGCGGGAATTTTGTTATTCTTCCCGGGCAT TTAAGCCAGGGAAGGTTGAATGGTAGGAATGGAAGTAATGCGTGTTCTGT CATTGCTGTCTTGGCTGGTTATTTTTTCAGCACATTCTCAtcgaaaatta attttcacaaTAGTGCCGCATTATTCGTAGGTTGTATCGAAACTGGAAAC TCCCTATATGATGAAAATCAGAATCTTCTAGTGCATGAAGCCATTGATTT GATTCCGATTTCGCTCAAAATCTTCGAAGAAAGGAACTCTTTTCCAAAAG ACCTTTCTAATGTAATTGAGTTATTGTTTTTGAAGTCAGAGATTGTCATT GTGACTTGCAACATCCAGTCAGTCTGCTTGGTTCGTTCTTCGATTGACCG aaagatttatttatttgacTCTCATCAACACAACGAGATGGGTCCCTTGA TTGCTTGGACTGAAAACGGTATTCAAGATATTATTCCGCAAATTCCTTTC AAAAATGATAACGATGAAATATATTTATGTTCCATTcaatactaattttt ttttattttctgttagctctttttttttttcattaaggTTGTACCAAAAA GCATTTTATACTGCGACGAAAAAACCGTGACAAATagaataatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029297TCONS_00029297Clytia hemisphaericatranscript
TCONS_00029298TCONS_00029298Clytia hemisphaericatranscript
TCONS_00029299TCONS_00029299Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029297-proteinTCONS_00029297-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000736supercontigsc0000736:18786..26179 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75 0.88 0.33 0.11 12.58 8.35 11.86 15.81 9.61 8.93 8.89 15 13.85 13.9 6.66 6.33 4.04 4.85 7.08 6.28 6.82 5.5 3.79 5.05 12.81 43.91 3.52 3.3 4.82 4.15