XLOC_016477 (gene) - C. hemisphaerica

Overview
NameXLOC_016477
Unique NameXLOC_016477
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000719:55317..57763+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016477 ID=XLOC_016477|Name=XLOC_016477|organism=Clytia hemisphaerica|type=gene|length=2447bp|location=Sequence derived from alignment at sc0000719:55317..57763+ (Clytia hemisphaerica)
CGTACAGAAAAAGATGTAAATGTggttaaagaatttcaaaagaCTAAATT
TTCTATAGCCAAAGATCCAAATATGGTAGCAATTCATGACCATCTTACAT
CTTATTCTGCTGACTTCGTTTGCAACGAGCTAGCTGCTTTCCCAAAAACG
TCGGAGCGTAAGAGCACTATCGACTCGTGTGATTGCCCATGTCAATGCAG
CTTCCATGCAGGCATATTTTCAAATCGCGCTCTTTGAAAGGATGTACACC
GATCTTTGCGAGTTTCGTTGGTCAAGAGCATATCTTCATCAAAGTCAGCG
GCTTTTTTTGGAATCGCACCTTAAAAGAACGCAAGCGATCGAAATTTCGT
CGCCCGATGGCTGTCATGAACCAAGTTGAACGATGTAGGAGTGCCAACGG
TGTATGTCAAAACCTTTCAAAATTGGCGTCGGAGGCAGGGGGTTCTGCTT
TCGTCGAAAGGATGAGACTTCTACAAAAGCTGGAAGATCTGTGGCGAGAC
GGAAAAGAGGCTCGCCTAATCTTTCCTCCAGATCGTGTCGAATCAGAAGT
ACATCTAAGAAACGAAACCTCAACTGGTCCTGATCTTCCAGATCGTGTCG
AATCAGAAGTACATCCAAGAAACGAAACCTCAACTGGTGCTGATCCACAA
TTCAAACATGAAAACACAATTGACGTGAGACATTTGAAGATGCCTTCAAG
AATAAAACCCAAAGGCCAAAAGGCTACACCAAGACAGTTATcggaaaaaa
tagaaaacgaaAGAATGGTAAATTTAGTTGCATAGTAAACGAACCCATCC
CtcttcattaatttttatttttatatttatttaagaAATTTCAGCAGTGC
ATTTTCCAACTACCTGACAACAAGGAGAGCTTCCTGCTCAAGAATAATTA
CTTGTTAACCAGTCACCTTTTGCGATTAAGGATGGTTGATATACACTTTT
ATCTGAAacccaaattttcaaatcattgaTGAATTTGCTTAGGATTATCA
GGAATTCGACCTAAAGTTCCTAGTAATGCATGCCTATGGATTTTGAGCCA
ACAATGGCTGCAAGTTATCCAAAATTTAGACTTTTTACCTCGATTCTTGC
AATTATTTTTCTACGTTTTTAGATTCCAAAAGTAAAACTGACAGCTCCCC
CAAAGTCCCGAAAATTCAACTTGAGGTAAATCAAATGTTATCTTTATAGT
ACTTATGGCCTTCCTTTCTACCCGAACAACGTTTGCTTTAAGGATCCTTC
GAATATGTTGCGTGCCCTATTTCCTCCATTAAGCACCGCCCTATTTTAAC
AGCCGCCCTCTTATAATCACTGACCTCCAAAAACCGCCACTTATCAAACG
GTGCTTATTAGAAAATGATTgggaaatgatgaaatttttagtCATATCTC
TAATATCCGTCTCCAAAGTAAATTTACAAATTAATCTCATTACACCTTGA
CAGTAAAGATATGGTATGAAAAACCACCCATGTCAGACTGCAAAATCCAC
GATTCAATCAAATTGCACGTTAGGggcaaaattttccaattcagAAATAA
GCTATTAAGCGACGCCCTCTAATAAGCACCGCAcataaaatcatgaaaat
ttaataagcgCCACTGCGTAGGGGAAATACAGTATAGTTGTTGGGTAACA
TACAGCATACCAAACGTGATGCAATCAGGATTAGTTTTGAGATTATAGAT
GAAAATAgactgaaaatttttccaattttcatggGAAGTAgtctaattac
aaaaaatattgtttccaCATGTTAGCAAAAAGAGAGTGGATTTTAGTTTT
AGAATTAAGATGGAGACAGTTGAAAAAGAATTACATGGTGTTCTTACTTT
TCTTTTGCAGAGCTCAAACGATAAaagaaaaatgctgaaaaatgtgGAAA
AGTCACAGCCCAAGGTACTAAATCGTTCTTTTTGACCTTTTCCTCTCATT
GTACTAACGGTATCTTTTCCGCAGCTTTTTTCGGATAGAAGCTTCAAATT
TAAAATGGAGACAGTTGAAAAAGAATTACATGGTGTTCTTACTTTTCTTT
AGCAGAGCtcaaatgataaaagaaaaatgctgaaaaatgtgGAAATGTCA
CAGCCCAAGGTAGTAAATCGttctttttgacctttttctcTCATTGTACT
AACGGTATCTTTTTCGAAGCTTGTGCTCCTATTATTGCcaagaatttata
aaaattaccTATTTTAAAATGAAGTTCACAGGGTCAAGAAAATAAAAGGA
ATTTTCTACATCTTCCAAAGATATCTCGAAATCACTCGTTCCTTTTGTAG
GACTCAAACATCAATGGCACTATTATTGGTAACCCTGATAAGTTAGCGGA
TCAGCTCTGGTAAGTAAAAAATGGGTaaaattgacgatttttgaaagtCG
TATCCAACGGAAACGATCGATACCATCGGATAGAGcgtgaaattctg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028992TCONS_00028992Clytia hemisphaericatranscript
TCONS_00028993TCONS_00028993Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028992-proteinTCONS_00028992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000719supercontigsc0000719:55317..57763 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.16	0.1	0	0.77	0.74	0.84	0.93	1.07	1.32	1.28	0.88	0.52	1.24	0.14	0.05	0.1	0.1	0.14	0.1	0.13	0.06	0	0.38	1.55	1.26	0.06	0	0.05	0