XLOC_016107 (gene) - C. hemisphaerica

Overview
NameXLOC_016107
Unique NameXLOC_016107
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000678:51414..57188-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016107 ID=XLOC_016107|Name=XLOC_016107|organism=Clytia hemisphaerica|type=gene|length=5775bp|location=Sequence derived from alignment at sc0000678:51414..57188- (Clytia hemisphaerica)
TTTTTATTTTGTTTAAGTCACATCTGTGACCTTCTGGAACAAAGTTTTCT TGTTTTGGTACAAACACATTTGACACTATAAATACGACTTACTAAATCGA TTATCAGTTCATTGTAATTTAATGCGCTATCGAACGAGCGTTCATTGACT TCCACGCCGGGCGTAATGGAGAAGTTGATGATTAACCGAGAGTACGCAGG AGGTAGAATGATCAAGCTCAACAACGCAAAAAATAATCATATAAATCAGG GTCGGTTGTACCGTAAATCTATTTTTCCATACGCAAGCTATATGACACCG TATCCTGCTCCACCAATGGGTCTGCATCAACCGTATTTACCGCCACATCT AGCAGAGGATAATTACACAAATTGGCTACCACCTAAGATTCTACCGATCA ACAAAGTCAAGAACTTTCGGTCACCTCACAGCTCCCCGCCACAAATGAAA ATGCACTCGATGAATTATAATTTTTCAAGAGAAGATGTTGATGCAGTGTT GTATGGATATGTAGGCGATCGTTGTGATCGACAGAAAACTTCACATTCAC TTTCAGGACTTTGCACAAGTCCTACAAATGGTAAGCTATCTTATTATGAT TTATATATTGTCAACAGAATCCTTTCCATAAAATTTCATGCCACTGCACG ATTTTTGAAAGAACAAACTATGTAATAACAATTTGATTGCCAAAATACCA AGAGCAAGTTAATAATATTTTAAGACTTTGCAGACCTTATAAGGAAAATT GATAAAAATACCTAAAAAAATTTGAAAATATAAACAGATGAAATTTGGCC AAATTTGACTATACATGTTGACCCTTTTAGTCTAATAAAACTTACCCTTT AGAGTCACACCTAAAAATTAATTGATTACCCCTAGCGTTTCTCCGTTAGC CGTGGTTAGCTAATGGCAGGACCATTGGTATGATCAAGTACTTATGTCTC CAAACCTTGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCTGGGGGGGGGGGGGGGCACTCAGGCAAAATTGGGTACTGGTCGTG CCGCTGGTCAGGGTCCCTTTTTAAGCTCTAAAGATATCTGATAGAGTCCC AAAGCTACTAATTTTCAAGATGTGTTTCTGACAGGGTCCAATTTTGGTTA TTTGGACAATTTTTCATGGTAAAAGTTTAATTTTTTCGTCTACTTTTAGT CATTTTTGCCACTTGTTAGGGTGGAAAATGGAAAGATTTTCAATTTTTCG TTCTGACAAGGTTACCATTTTACCAAAAATTCATATCTGACATTGTCAAC TTTTCAAACTCCAGCGGCACGTCCTCGTCGGTCGTCAAGGTCAGTGCCCC CCTCCCCGAGGTTTTGACATCTCATTTCTAATTGCTTTTTAGAATGTACA TTTGAGCAAGATCTCATTCTTCCAAAAACATTGGTGATGAAAAGGCTTCA CATTGGACCAATATCTCATAAAGGTATGAAAAGTTTTTACAAATAAAATA ATTCGTCACAAAGCTCAGTTGTGAGTATCATTCCTGGTGTCGGTTTCGTG TAGGTATTTTGGATTTCCATTTAAATAGACCTTTTCATAAATTACGTTGC GAACATCACTTGCCTCGCTTTGAAATTATTACCAAGATGATTAACTCTCA GCGGATTTTATTGAAACTACTTTCTATTCATAAAAAAATCATTTAATGTC TCAAGGGACATAATCACCATTGTTTGAATACGAGGTAAGTGATGTCCGTG ATGCAATTTATGAAAAGGTCTGTAGTTCTAATTCCTAAACGAAACCTTCG GGGGAAGCTTTACATCGAGGGGCAAATCACTCGTAAAATGGTGTACGAGA TTTATTTTTGATTTATTTTTGATTTATGATTTATTTTCGATTTATTTTTG ATTTATGATTTATTTTTGATTTATTTTTGATTTATGATTTATTTTTGATT TATTTTTGATTTATGATTTATTTATGATTTATTTTTGNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNAAAATCATTTATTTTTGAAAAAATAAAAAAAG TTGAAAAGTCAATTTTTTTTCGAAAGATTTTTTATTTATTTTTTATTTAT TTATGATTTATTTTTGATTTATTGATTTATTTCTGATTTATTTATGATTT ATTTTTGATTTATTGATTTATTTATGATTTATTTTTTATTTATTGATTTA TTTCTGATTTATTTTTGATTTATGATTTATTTCTGATTTGTTTTTGATTT ATGATTTATTTCTGATTTATTTTTGATTTATGATTTATTTTTGATTTATT TTTGATTTATAAAATTGTGTACGAGATTTATTTTAGTGATTTGCCCCTCG CTTTACATGATGATAAATTGGAAAAGCATTTCATTCTGTAATCCTTTTAA GACTGATGACGGATATACCCGACATGGAATGTCGAGAAGTGACGCCCTGT TTAAATATTAGAATTCCAAAATTCGAATAACATTAACGATTTTGGTTCAA TAGTGAAAAATTTGAAATTTTGTTGAATGTATTTCTTATGTTCTGATCTA CCTCAGGAATCTTTGCAAGTGAAGCAATAAAAAAGGGCACCACGTATGGA CCATTTAAAGGTAAAATAATAAGGGCCAACAATAGCCATGAAATAAATCT CGAAAATTCTTGGGAAGTTTTCAACAAAGATGGTAGCCTCCTTCACTACA TTTGTCCAACACGTGACAATTCATGCTGGATGAAATTCGTCAATTCAGCT CGATATGCAAAAGAACAAAATTTGTCAGTTTTACAAAGAGGAGATCAACT TTATTATGAAGTCATAGAAGATATTCAACCAGATACAGAACTTTTGGTAT GGTACGGTGAAACATATTTCAATTACATGGGTTTTCCAATGGCAATAAAA TCGAGCACAACAACAAGCATACCTCGCAAGCAATTTTCTCCGCCTGCAGA TAGAGAAATGGAGAAGGAATCAGCTTTGATAGGTAAAATTATTCATTTCT CTTTTTAAAGTACATAGAAATAATATTTCCAATTTTGGTTTGAGCCTATT TCATAGGATACGTGTTTTCATGAAAATATAAACGACTGGACATCCATCTC CTTTGTAGTTTTGAAGATAACACTGCTAGCTTCGTTGCCGCCTCGTTAAA TGATCAAATGAAACAATAAATTTTGATGATATACCTCTTGGGAATACCTT GCTAACAACGTCAAAACTTCGACAAAAGTCTCTGTTGTTCTACTTTTCTC AAGTCTTTTATCTATATCATAACAAAGATAACAGAGGCAAAATCATCGTC AGTTTGTCAAAACTCCGACTAATATTTTCAAATCTTGACTTGAAAGTGTC TAATGATTTTAGAGAGTGTCACATTCTAATTTCGATATTCTTATGACACA GGCTCTCAACTTTGGCAAGCTATTTTTTTCAAGTCATAAAAAAAATTATT GGAGTTACAAAAGGGATTCAAAAGTATACACGCAGTTGAAATTCTGCATT TCAGAGTTGAAAATGTTGATAAAATATATTGCAAACTCGTGAAAAAATTG AAAATAATTTTTTTGTGCATTAGAAGTAATGTTCAAGCTCGATCAATCAT TTTACCTAAACAATTCAAAGAAATAAAATTATGACGGAATATTGTCGGAT TTTTTATACCAATTTTGAACTACAGGCGGCAACGAAGCTCGCTTCAAAGA GAACAATAAAAGATAGATGTCCAGTCGTTTATATGTTCATGGTGTTTTGA AGACAAGATATTTTTCTACGAGTACATCATTGCAGTTATCAACTTTTTAT GCTTGAACATACTCTTTTGCGAACTGATACTAAAAGTTTTACAAAGGCAA CAACAATAGAAACGAGTTCATGAATTCAAATGTCAATTGAATAATAACAA CAAATCAATTGTTTTCAATGTCTTTCTTAAGGAAAATCTGCACCGATTTG TGCATTTCCCCCCTTTAAATGGAATCGAAAAAAGCATGTAACAAATGCAC AAATCCTATTAAATCTGTGACTAAAAGCGAGAGTATACACCTTTTCGACC GTAGCCACCAATGGCCACGTTGGTATCTTTTTGTCCGCTTTATCCCACTA AAACCGTCCCAGTCCTTTTTTCGCACCAATAGACAATAGAAAAATGCGAC AAAAAAGGTTTGGGACGGTTTTAGTGGGATAAGGCGGGCAAAAAAATGCC CGCGTGACTACGGTCGAAAAGGTGTATTACATCTTGAGCTTACTTTAAAA TACGAGCTGCGATTGTGAAAGTATACTGTACTTATCCAAAACAATCCAAA AGTTCCTTAAAAATCAAAAGAAACAGAATAAAAAATGCCGGTTTTTGTTG AGGTGCTCACCATCAAAAGCGCCAAAATCATCGCAAAAGTTTGGATAGTT CTGTGGTATAGCCTATTTTCACGGCCACAAATGAATACGACGTCACCTGG CCCTTGCACCCATTCTCCTTGTGAAGTAACTGTTGGGATTTGTATACTTT AGGTGAACAAACTTTCGCGAGCAGAAACTTTTGCGATTTTCGCGAATTTT GGCCTTTTTCGCAAAAGTTTATGCTCGCGAAAAACTCTTTAGAAAATTGA AAATCGTAATAAATATAAAATTTTCAGCATATTTCTAGACTTTAATGCCT TTTTAAAGTCAAAGAACAACCATTTTTATCGGATTCAAGGAACATTAGTC ACTCTTTCGCCAATTTTCGTTTAAAAATTTTCATTTTTATCCTAATTTCT TTTTCATTTAGAGGCAAAAGCGGGAAGTTTTCCATGCAATCGATGTGGAA AAATTTTCTCTTACGAATATTACCGTGAAAAACATTTGAAATATACACGT TGTGTGGACAAAGGAGATCGAAAATTCCCTTGCCATCTATGTCAGCGATC ATTCGAGAAGAAAGATCGACTTAGAATCCATATTTTACACGTCCATCAAA AATATCGACCTCATGTTTGTAAAATTTGTGGTAAACGATTTTCACAGTCA AGCAGTTTGAATAAGCATTCTCGAGTACATACCGGGGAACGACCGTATGC CTGTCCGCATTGTCCGAAGTCGTTTACCGCATCCTCAATATTGCGGACGC ATTTGAGACAGCACAATGGTGAACGGCCGTTCAAATGTAAATTTTGCGGG AAAGCATTTGCGTCACACGCGGCGCACGATAGCCACGTCCGACGGACACA CGAGAAATTAAAGACATTTTCATGTGGAGTGTGTTCTAAAACTTTCTCCA TGGAGTTCGAATTAAAATTTCATTTGAGTACCCACACTCATCATGAACTA GCTGGGAATTTCATTAATGGTGGTACACAAAGGAGCCGTTCGTATTCAGA AGAAAGTGAAAGCTCATTAATCATAGACATTGAAAATGAAGTAGATTTGT AATCTAGTTAATTCATGCTTGATTTAAAAATTATTTTATAAATAAGTAAT ACTTTAGATTGGAGTGAATTAATCAAATTTTGAATGTTAAAATTTCTGAT AGAAATATAATATATATTCACTAAACAGAATCATTTGATTCAGAGAGCTC TGATCTTCGGATATTATGATCTTCTATTGATCGAGGGGAGCTCACATGCT AAGAGAAAACACTCCCAAAAACCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028435TCONS_00028435Clytia hemisphaericatranscript
TCONS_00028434TCONS_00028434Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028435-proteinTCONS_00028435-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000678supercontigsc0000678:51414..57188 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRDM14PR domain zinc finger protein 14 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.02 0 0 32.4 22.89 25.51 26.79 10.87 11.18 8.8 7.61 0.01 0 0 0 0 0.03 0.13 0.05 0.06 0.09 0.05 0 0.11 0.16 0.03 0.03 0 0