XLOC_015968 (gene) - C. hemisphaerica

Overview
NameXLOC_015968
Unique NameXLOC_015968
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000670:87570..91328-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015968 ID=XLOC_015968|Name=XLOC_015968|organism=Clytia hemisphaerica|type=gene|length=3759bp|location=Sequence derived from alignment at sc0000670:87570..91328- (Clytia hemisphaerica)
CGGGGATAAAACGTCCGGGGTAAGTAACCCCCTTTTTTACAACACCTGTC
CTTAAATACTACCCGAGTATTCATTGCCTCGACCATTAGGCTGGCAGAAT
TATTTCAATAATTATTATTAATGATTAGCTGCAAATTAGCTGATCTCCAA
GCAGATTTTGATTACTCCCTACTGGCATGTATGCACTATAAAGGCCCTCG
CTGTGTAAGAAATGCACATTCACCAATATCCTTTGTGACATGTAATGAAT
TTGAGCTGCTATGAGATTAGAAATTAAAGGTTTTATTTTTACTTAAGTGT
TCCCGTTTTTATATCAGGCACATATTTCATATCAGGACAGTGTCTGCCTA
TTGTTATATTATGCTGGTAAAAGGAAAAAAAAGTTTTTCCTTTCCTCTTT
CTGACCAATCTTGCTCCACATCTGTGTCAATCCAATGTTAAAAAGCTTGT
GAATTCAAATTGATGATTAAGCAAACGATATTACTCTTATTTAAAAACAA
AACCTTTAACTGAAGGATTTGTTTTTGCATAAAATAACATTTTCAAAAAT
TGATTGGAAAAATTAATTTTTTGAGGCCACTGTCATAAGAGAATGTTTTT
TTAGAACTAGAGACACTTTGAGTTTAAAAGCCATTCAGCAAAAAAAAAAA
TCAGAGTCATAAATAATAAAATATATGTGTTGGCCAAGGTACATCCTACG
AACGAAGAAAAGGCTGAACAACAATTTTGAAAAGTCTCCTAAAATCTCCT
AAAATCTCCTTAGGAAATTGAATCTTTGAATACTTTCTCCTAAAATCTGC
TTAAAAATATTTTACCAAGTTTTCAAAAATTTAATTTATTCTGATTATCA
AATTTTCATTGCTAATGATCCTATTCATGGCATACATGATTGTTGACAAA
AGCATTTCACTCTGTATGCTTAATAAAGGTCTTTAAGAACATTGGAAGTT
ATGAAAATTTTGTAGAATTTTCTCCTCAAAAATCCTAAAATTCTTTTAAA
AAGTGTGAAAATCTCCTCAAAACTCCTAAATTTTTTCCCCGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT
TCCCCGTAATTTTCAGTTTCTCCTAAAAAAATAGTTGAAAATCACCTAAA
ATCTACTAAATTCTCCTAAATTTTGATCAAAACAAAATAGTGGCAACCCT
GCATTCAGCACAAAAAAAAATCAGAAATCATAAATAATAAAATATATGTA
TGGGCCAAGGTACATCCTACGAACGAAGAAAAGGCTGAACAACTCCAACG
TCAAGAACAAGCACGCGATGAAGCTGACAAATGGTTAAAGTTGAGTAACG
CCAGAAGAGAAGCTGCTAGAAACCATCTTCTAACAGGTGAAGGGCCGACA
CTGCAATCTCCGAATGTACAAAGTATTTCTTCTCGTGAGGACGATGATTC
TAGAAATGTTCAATCAACAGAAGCTTCTTATCTGCAGAGATTAAGTGGAG
CAAGAAAGAAAACAACCTCTCCTACCCAAGATGGTGAGCGAACACCTTCT
GAGTCTTCCCATAAAGTTTATTCGACCGCCTCACAAGAATCACAGCATAC
CGACTACCGAATTCCTGGTGCACAACCATCCTCACCTGCTCCTCAACTTC
CATCATTTACTGGCTCTGAGCAACCTTTGAGCAATCATGAACCATCCTCG
ACTGTCTCTGCACCATCCTTAACTATTTCTGCATCATCCTCTACTGTTTC
TGCGCCATTCTCCATTACCTCATCACAAACTAATCCAAGACCACCTTCAT
ATGAAATTATAACTTCATCCCCAAGAAGTGACACACCTATCAAAAGTATT
CCTTCACCTTCAAGCCAGGTGATCTCAACTGCAGAAAGTTCTATCGCAGG
AATGTCATCAGTTGCATCGACTAATAATTCGAGCCAATCTAAAAATCGTC
AAAAAAGAAAATCGAAGAAGACTTCAAAGACTGACTGGAACGGTACCAAT
TTTTTCACCATTGATTATTCCTAACTGCCCCGCCCCCGGAATATCATATC
AAGAATTTAGGCGATCCTTTAACAAGCGCTGTTTCCAGGCACTGGTCTCT
CCATGTGTGTTTAATACCCATGAGAATTTTCTACAATCAGACTCAGCTAT
GACGCCATATAAGAACGATATAAGAACGCCATTACACTGTGATGAATAGT
AGTTCTAAAGGGCTATTTCCACGCTTTTCACCGAAGATGCCAGAAAAGCG
TTATTTACGGATTAGATCGAAAACAGGAGCTTAATCGGATAATGGTAGAA
TGTATAAGTACAGAGGGAACTAGGTCACAGTGATGCCATAGTCTAATTAG
ATTAAGATTGGGTCTGACAGGAGATTCTTTCAAATTCATTACTTCAGGGG
AACCGTATTTTCAAATTTCGAGGTTATTATTATCGTATTTTCCAGATGTG
CCGCCAGGTTACGATCAACTTCTGCATCCACCCAACTATTGGGAAGCGCT
GGAATTCCAAGGACAATTTGAAGAAGGTGAATCTAACAGTGAACAAGAAG
AAGAAGAAGCCAGTGCTTGTGTTAAACCTGATGAAAACTGGGATGTTTGG
AGATTGACTGATAATAGATTGGATTCTGACAATGAAAATTAGAGACACTT
GGCGACGATTTCAAACATTGAATTTTGAATGTACTTGGATTATTAATTGA
AGGAAATACCGTGCTATTTGTTTAATGAAAACTGGGATGTTTTTGGAGAT
TAGGAGCACTTTTATAACGATTTTATAATATTGAATTTGGAGTTTGAACA
TTTTGTATGTACCTTATCGTTCATTTCATGTTGACGGAAAGGTAGCAACA
AAGACCAGGGAAAACCGGTCCAACATTTCATCCAACATGCCACTTTGATG
AAATGTTAGACCGGTTTGTGCAAATGTAACATTTTCAAAATAAAGAAAAA
TTCATAGAAGAAGAAGAAAACGTTCGTGACGTTTGTTCGGCATCAAACAT
TTGATAACAAAATTTGTTGCTTATCAGACTAGATTTTCATTCAACGTTTT
TAGTTTTCAGTTTCTTTTTTTTCAAATGTTGGTTGAAATGTTGTCACCTT
TATCGGGCGCATTATGCTCATGTTTAAACCCAATTTTATAGTAAAGTGTT
GGTTTGATGTCACAGCTGCCGATATCTTTCAAGCAGCTCTTCAATATCAT
TTTTGTCTTCTTCTTGTGCTATGTTCCAAAAAGACACCCTTAAGGGTGTT
GAATAACCAGATAAAAATTTATAAAACTTGAGCTAAATAAAAAGCACTAA
AAATAAAGAATAATTTTACTTTTAAACTTCTCTTTAACCCTTTGAGTGCC
AGGGTCCTTTTTTCTAAGTTTTTTTTAAAAAATCGCTAGTTCAAACTTTA
AGGGCTTATATTTCCTGATCTAGAAGGAATTAGAAGCTCGTATATAGCTC
GTTGGATAGCTTAGAGTCTCTTCTTTCTTTTGGGCGCCTTCGGCGCCGCC
CGATTTAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028209TCONS_00028209Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028209-proteinTCONS_00028209-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000670supercontigsc0000670:87570..91328 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.51	22.94	26.39	23.78	3.75	2.54	7.55	6.94	8.19	8.6	9.33	6.22	5.65	6.63	6.69	7.76	7.31	8.19	6.04	6.48	4.93	5.66	10.72	9.63	8.49	11.45	4.76	4.77	6.57	6.96