XLOC_015959 (gene) - C. hemisphaerica

Overview
NameXLOC_015959
Unique NameXLOC_015959
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000670:60456..63822+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015959 ID=XLOC_015959|Name=XLOC_015959|organism=Clytia hemisphaerica|type=gene|length=3367bp|location=Sequence derived from alignment at sc0000670:60456..63822+ (Clytia hemisphaerica)
GCCCACTCTTTCAATAATTAGAggtaaaatagtttttaaaatGGGGTTAT
CTGATTTATTGATCAATCTTATTGATATATAATGAAACATGATGAGCAAT
CATATGATGAATCATTTTTGGCTAAACTAGTCTCGAGTGAAGAGTGCAGA
GTTTACAAATTTACATAAAATCTAAACTGGCCAATCAGTTAACTGGTTAA
ATCAGACTtgagtttaaaaaaaaggtaagattttcaaattatgcgggggg
gggggcatctTCAACCACCCATTCAATATAAACATCTATTAACTTcaccc
ccttctcgcagacccactgggaccccttactggaaaaattggccaccATA
TCGTCCCCAGGGGAAAGTTATCCTGGAAACAAAAACTgcaggataatttt
ccactgggaacgatattttggccaatctttCTACTTGGAAGGGGTTCCGG
GTGGGTCTGTGAATGGGGTGGGGATgaattcaaagtcaattttcagcTCC
ACTGGGAAATTAACTTTGACTTCATTCCGATTCGAAAATTCGATGTCTGA
AAATTGCACtcaaaccatccccactggattttttaacctcaatagaaaga
acaatagaatttctatccccattgggagtttaataggaatttttatcccc
actgaggaaaaaggttccaccgaggctgtgagacagggctgTTCTCACAG
ACCacctgggaccccttcccagtGGAAAGATtagccaaaatattgtcccc
agtggaaaattatcctgcagtttttgtccccactgaaaataattaaataa
ccAATCCTCACCGAAAATATCAtgatatttttcccatccccactaaattt
tctgacttgaaaacaaggAAATTTAAATCCCTAGCCATAAAAGATATGAA
AATATCCCCaacgagtttcagtccgttatttttaaccCCACTGGTTgcaa
aaatcctaccgggtctgtgagaagtgggTGTATTAACTACTAGCAATCTA
GTAATGGTACGGTATATaataaaagcttttttatagtgCCAGGAGTACTA
TATCATGAAAGTTTTCCAATGTCTTCGTTACAAATTGATAACCGGAATTG
CAGAAACAGTTCTGTTAATTGACACTCAACATTTTGTTTTTAGGATCACA
CAGTACATTCAAAATGGACCAATCCAAGATCCTTCTCATTGCTCTTGTTG
CTCTTGTTTTAACTTCTACCGCGCATGCGCAATGCCCTGACTCGTGCATC
TGTGGAAGTAATAACATCACTCGATGTTCCCATAAAACTTTATCCATCAT
CGAAACATCGAAGATACCCAAATCAACAGTTCAGCTCTACTATAGTGATA
ATTTCATAACCAGTATCGACAAAAATGATTTTGCAGGACTGACTAATTTG
CATACTCTTCAGTTACAGCAAAACCAAATTTCTAATATTGAAGATGGTAG
TTTCCAAGATCTTCTGAATCTCAAAATGTTGATTTTAAGTGACAACAATT
TGAAGTCGATTACCAAAGATACATTTAAAGGACTTTCAAACCTGGAACAT
TTGATGTTGAATGGCCAAAAAAATCAACTTGAGATTGAAGACAACGCTTT
TGTGCACAACCCTAATCTATTAACACTTATGCTTACTGGAAATAAAATTC
CAACCCTAAGGAACACTGTTTTCAACGGCTTAACTAAACTAAAAAACTTG
TATTTCGACCTCGACAAGATTACTCACATCGAGGAAAATGTCTTCAAGAG
TATCCCCAAAGGAGTCACAATGGAAAACACTGGTAGAAAAGGAGTAGCTA
GTCCCAATGGTTGTTGCTGTAGAAGAGCGAGAGCTTTAGCTGGAACAAAG
TTTGAAACACTttgctcaataaatcaatgtaGCTCCGCTGGTGCATGCAA
AGAGGTGAAACCATCTTCATCTACCACACAACACCCAAAGACAACAACTC
CAGTCCAACCATCTCCTCAAACTTCATCATCTGCTAATTTAGTTAAACCT
TCAAGCTCCGAAGTTACCGCTCCAAAGATAACATCTTCATCAAATTCTCA
GCCAACATCAACCATTAATCCACaaaagagctcatcaaaaacGATGGTAA
AACCCTCAAGCTCCGAAGTTACTGCTCCAAAGATAACATCGTCATTGAAT
GCACAGCCAACATCAACCATTAAACCACAAATGAGCTCATCGCATACGAT
GATAAAACCCTCAAGCTCTGCAGGAACTAAACCTGAACCAACCTCATCTC
TAAATCCTCAACCCGCATCCACTTCGCAATATCAAAAGACTTCCACAATC
AAACAAGCTAAACCATCATCATCTTCGATCGAACCGGAAATAGAAGCATC
GATCACCACCATGCAACCTTCACAATCAACAGCACCAGTAAATATAATTC
ATTCATCAAGCTCAGCAACCGTCGAATCATTAACCTCATATTTTCGCCAG
GAGCAATCCAGTGCAGCAATCGTCATTAAACCGTCTCGAACCCCATCAAT
GGGATATTCAATGGAAAGCCTCTCAGCGTCATCACAAACACAAGCATCAA
TGTCACCAAGCACCTATCTATCACAATCTCCATCTGTTTCCAAAGAATCA
AGCCATGTCATGTCTTTGCCATCACTTTCAACAAGTATCAAACCATCATC
AACATTAGGCGAATCGATGTTCTCTTCCTCGAGTTTGATTTCTGAATCCA
TTGATAAATCCTATTCAGCGATGCAATCAACTAACCTACCATCTTCAAGC
TCCTCCATTTCGATCAAAAGTGCTTCAATTTCACTCAACGAATCATCCGT
GAAAACCTCCCAAATGCTCTCACAATCAAGATCATTAACACCTTCAGCCT
CACCAAGCAGTTCCTACCAAACATCAATGTCATCCACGACAATAATCATT
ACCTCTGCATCAGAATCCCCAGATTCTCAAGAAGAGTCGTCTACTCAAAC
ACCTTACATCTCCAAAATGATGTCATCAATGAAACCTACTCGGACATCAG
CAACACCAGCTCCTGAAACAGAACCTAACACTATCACACCAAGCTCATCT
TCGGTACAACAGCAGGCCAGCTCTTCAGTTCAAGGCAATGCCGTTCAAAC
AaacttttcaatcaaaatattaATTACTATGCTGATTGTATTTGTAGctg
ttttgttttaaatagaTTAATACTTGTATCTTGTATTTGTTAAAATTATT
GTAAGATAGACACTTTTGAAAAATGCGTTTGATTTTCGGACTGAAGATCA
CCGGCAGAACCTCTTTAGAAAACTATATATGGGAAATATACTGATTacat
tcttcttttcttttcaaaattttacttgCAATGAAGCTTACTttgcttaa
ccctttaagtgccaatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028190TCONS_00028190Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028190-proteinTCONS_00028190-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000670supercontigsc0000670:60456..63822 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0.02	0	0	0.04	0.07	0.04	0.04	0	0.02	0	0	26.07	26.56	0.03	0.04	0.08	0.13	30.49	54.97	0	0.04	0.11	0.02	3.37	0.91	0.04	0.02	0	0