XLOC_015550 (gene) - C. hemisphaerica

Overview
NameXLOC_015550
Unique NameXLOC_015550
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000635:137377..146109+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015550 ID=XLOC_015550|Name=XLOC_015550|organism=Clytia hemisphaerica|type=gene|length=8733bp|location=Sequence derived from alignment at sc0000635:137377..146109+ (Clytia hemisphaerica)
caaaaaaaaactcGTCAAATCTCGAATGAAGGACAAACATTTGCCTCCTA AAGCATTTTTCGCATATacgtaaaatcttaatttttttttggaattttaa ggAATGTTGAACTTCCCTAAGCTTGGATGTGTTCTAAGGCCTTATATAAA GCTTGCTCTCAGAAAAAGTTCCCCCCTCAAACTAGTAAAGCTACTTCTAT AGAAGATAGTCTCTTCATTCGGTACTTTTTTCTTAAATGGGTTGAAAAAG CCTTGCGAGTGACTCTTGGTGACTCTTTCCGTATAATATAGCATAGCAAT AAGTAGAGATTTAtcgatttaattttttttttgaatttcagatCATTCTA AGATCAGTAAGAATTCCGAGAAGAACGTACAAGGGGATTCAACAGATAAA CAGAATGAGATATCCATAGGTGTTGAATCCTCCAAAATATCATCATCAGT GGATTACACGGAGAAAAGCAAATGGAGCAATGGAGAAGATGAAAACGCAG AAGCGCAAGGCGAGTCGGAAGAAGAAGAAGTTGTGGAAAGAGATTTCAAC TGTAAAGAAGTCAAAGCAGTATCGAAAGTTGATTGGAGTGATCTTGAGGA TAGTAATGCAGAAGCTGACGAGAGAGATTCTCCTTATGGGCAAAGTAAGG AATTTTTCCCTAAATaagaaataacattttcaataaCTCTTCCAATGATT GATGTAAAATCTCATTTAACTTTTCATGCTATCTATCATAATGCTAACTA TTATACTCTAATATGTTGTATCGTTGAGCTTTTGATGGTCTGATGTACAC TTACATAACACCTGATATTTAATTCTAAACTTTAGATTATGGAGGAGACA CTTATACAATGGATAGCTTGAACATTCAGGATGATACAGAAGAATCAACA CATTCTATCATTGGTAAACCGAGGAGACGTCCAGTGCAAAAACAAAATCC TGTCGAAGAAGTTACCATAGAGATGAAAGCGAAACAACAAGATTCTAAAA CAAATGATGAAAAGCAAGTACAAGAATCTAAGTTCATTACTACACCTAGA GATGAAAAAGGGGAAGAACCAGAATCCACAAAACCAAAAGTGCCAGCTAC CAGAACAGAGAAAATTGAACAGTTTTCAATCGATTCAAAGGACACCAAAC AGAAAGAACAACAACCAAGGGCACAACAAATTGAGGAATCACCAATGACC TCCACAATTATTCCACAACAAGAAACACAATTCATGGCATCTCCTCGAAG ACAACCATCGCCACCTCTATATCCACCAAGCTCTCCTGGAGCACTAAAGA ATCTGAACGCAAACAGTCACCAACAGCCACCAGCACTTCATAGACAATAT TCTTCACCCTCTAAAGCATCTTCAACGGTGAGTACCCGAAGGGGAATTAT TTTATATTAGAGCCGATTACAGCTTAAAGACTCCAACTGCCCAAACACCA TGGATCATTTTATTTACATTCTTCAGTATTGATATTGCTAAAAACTAATC GATTTATCGCGAATGATTAAAACGCATTTACACTTGCATTGTATGGTCTT ATCATAATAAGCTTTTGTGAACCAGCATGCAATTTTTCATTAATACGGTA TACGATATCTTATGCTTCTGACATCCACTAACAGATTTGTGCTCCCTATA CCACtagcggttttgtagaggtctgtgttTTAGaataataccgagtttat gtatcagaggacatcgagggcgacggtaagtgaagtcgatacaaaacaaa gtcgatagttgatgtacggctctatttcgcctttgctcacctaaacagac gacgttATTTTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNcctttgctcacctaaacagacgacggtattttggtgttt ttaccgtcgtcgagcaaagtagacggtgattttggaggcatgtcaacttt gctttataccgcccccctcgatttatctcgaatacataaactcgctaata ccACCTATAGTTTCTcaattgtcttctttttcattaaATTACATGACACT TTGTTCCCATTTTCAGGGTGAGATCATCTCAATTCAACTTGAGAAAGGCT CCAAAGGTCTTGGCATCACCCTGGCCACCGATGAGGCAATCGATGATGAT TCTTTTGTTTACATCAAACGTTTGGTACCTGGCAGCGTGGCCGATCTCAA TGGCCTACTGAAACCTGGTGACCGTATCATTACAGTGAGTTGAGCCtata ttgtttttaaaacttgCTTGTATGCTTGACTAATTTGCGTACCCACACTC AAAATAGGCTCAGAATGCATTGCTCTTTCGAATAGGGGGGGTTATGGTtt gcggaggagcggaatcggcccttttttcggacggagtggggAAATCatgc gaaaatttagacggaattacggaaactGGGTTCTccgacggagacggaaa attagacaattctAGTGCGGAAaacgaaatttagcaaaaagttttgcgga atttcggaattggcaaaaaatattcaaaattggcggaatttttgacaaaa atcttgaATCTCAAAGGAATTTCGGTTCATTTTtggacggtttgacggaa attgaagaaaaaattggcggaattgcggaatcgggtaccccctgaacccC CTCCCCCGAATAGGCAAAAACATCCCCCTTGAAATTTGTGGTCAAGTGTC CTAGTGAATGACCTCTTATTAATGTAGAAGGTCCTCTTAATTATTCTTTC GTCGTTGATTCTTTTTAAAGGTTCTCCTATTTTCTGTTACAAGTTTTCCT GATAGTTTAATTAATTTGTTATGAAGAGAATAAgttgtgaaaaataattg aacgAAAACTCGATATGACATTTCGCAAATGTGATTGCTACACATCATTA TTATGTCACTTTTTAAAGTACCTTTTTTCCCTTATTGTGCATGTTATGTT ATGTCTTTTTAACATTCCACAATTTTTACTTGCTTATCACCAGGTGAATG GTGCAAACGTGGAAGACTTAACACAAAAAGAAATCATTAATATTTTCCGA CAACTCTCTGGTACTGTCTCCATGGAGTTCTTCAGGTTTGTGCCCGCATT TTTTTAGTACCAGTATAAATTGGACGAAAAGTTTACTGCTTGCATTTCTT GACAGATTGATCTTCTGCAATCGAAAATGATGTTATCAGTTACAAACTCA ACTCAACGCTTCAACCTCAACCACgttcaaaatatcaaatattttattCC CTCTTCTTTTATTAAGACCACCTGACTTAACCCCATCACATAAACGGTAC ACTTCAGATGACAACTCCAACCTCACTTTGCCACGAACGCCATCCGTGTC ACCGAAGAAAGAACAACCAAAGCAATTCATTTTACAAAACGACCAACAAG AAGTGGTTCCACTAAATATTCTAAATTCAAATATTCCAGCCTCTTCATCG ACTCCTTTTGAGCTCTCGGACAAGATCGGTGTTTCTGAAGAAGTAACTTT CAACTCAAACGATGGGCTATCATTCGCTGATTCGTTACTCGCCTCTGATG GTGACAACAGTCTCGAAGAAGAACTACCTGCGGCTCCAATACCGGCTGCA CCGAAGGTCCTTGTCGAGGGCCATGAACGTCTTTTGCAAATGACCAGTCC ACCAGTAGCTGCTGCACCATATGTTGGTGACTCTGATTCAGAATCAACAC ATAATGAACATTCACAGTTGGAAGGTTTTGACGAATACGGAATATACAAT GAAGACAAATATTTACATCAGCTGCCACCTAAGAACCCTACCTCTTCAAT CCGTCCTTTATCGGGTACTTCCTCCATCAGAAGTTCGACCCGTAGTGCCA GTGGTATCCCTCGACCAATCAGATCACGATCCAACTCCTTACACTCCAGC GATAGTGGTGGTGGACAATCCCGTCGCAACAGTACTGAAGATCATAATCG ACCACCTCCACCTCGTGTCATTTTAGACAAATCTTTTGATAGCTTCATAC AAAGAAAAGACTTCAAATTCTACACACCTGGAGTTGTTAATACTGTCTTG TTATCACTGGATAAAAAAATGGCTGTTAATAATATCAATGCTGAATTCAT GGTAAGCCTCCCAAAGACATTCATTTAAGATTTTTTGCATTTAGATAGAA GTGATATTTCTGAAGACCTTGTTTTCAAATGTAGTCAGGAAAATTTTTTG TAGCACTGTTtggaaataacattttcagtttttcgtTAGTTTCATACTAC TCTCCCCTTGTCCTTCTTTAAGTATTATATGAATTACTTCACCTTTACAG GCATTACGGCAAATCAAATGTCTTGATACGTGTGATGTTGGAAATCGTGC TTCGAATCGATCAAAGAATCGCGTCAAAACCATTCTGCCATGTAAGTTAT TTCATTCTGTTGTCTATAGCTATCAACCCTTAGTGTAAGGAGATTTTGTC AGGTAGGTTCGATGCCAAAACCATATATTTCAAGAGAaaaccactgcaat gacttcagacATTTGACATCGATTCTACCTGGTAAACTCTAGCCCAGTCT CCTTGCGCTTTAAGGactatattcatgatatgcaccactggagagtcttc tgagaacttttgataaaattttccacccaaaaCGTCACttgaacaataga aaaagtgacgtattgggttgaagaaaaaaaaaactgaaaggttgcataat ttcgtgaagtcatcgcaatggtgcatatcatgaatagaggtATTCTATAT CCCTTCAATTTAAGTTATTCTGAAAACAGAAACACTTTACTTTACGATAT TTGAGTCAACTTTTTCCTCTAAGTGTCATTTCCATTTACGTTATCTTAAT TAATGATCCCTCAATCCAAATCCAACAGCCGTTGTCCGCATTCGCCTTGT ACAGTTTTGTTCCTTTGCTTTTTTTCAGACGACAAGAATCGAGTGCAATT GGCTGGTGGCGAAGAATCTGACTACATCAATGCCTCCCATGTCAAGGTCG GTTATTTCTCAAAACCACCCTTTAAATCGAATCTTATTAGTATTAAAATT ACATTACAAAGAAGTCTGTCTGCTCTGCTCTGTACAATCCATTTATACCG TGTTAGatgaaaattttttactttGACCACTGGTTTAAAGAGTTCATTTT CCATANTTGCTTTGACCACCGGTTTAAAGAGTTCATTTTCCATATTAGAC AGTATTCCGATCAATTTTCCACGTGACCAGGCGGTTTGCTATCTTTGAAC TTAACAGAAAATGTGAGGTGGGGATTCAAATTAAGAAGCCATACTTTCCA TATGTAATGTGAACTTTTCCTATCTGCAGCAGTTTAAATAAAATAACGTA TTTCTTTCAGTTACCACTCGATGGGAGCAAACCCTCACAATACATCATTA CACAGGTATATTAGCAAACAAACAGACCGCCCCTTTTTTCAATTAACATT CACTCTCATCTATGATAAAATCACACTTATATGTCACTGTCGATATTGAG AGACATCAGAAAGCATTGATTGCGAGTAGATTGTCGATATTTTTAAAGGC GTGGATGAAATGAAATCTCAATTTCCAATTAAAAATGATTTATGGTACAT CTTTAGTCGTAGTCTGATTCATAGATCTCTGCAAATCTGCAGGTTGCATG AAGAGCACAAACGTGTTAGAATTTTCTAGCCCAATGATATTTTATTTACA CACTTTAGGCACCACTTGAATCAACAGTTTGCGATTTCTGGAGATGTGTT TGGGAAAAGAAGGTAGAAGTCATTGTTATGCTGACTAgagaagaagaaaa ttcaaaGGTAATCATTTCAAGATGTTCTAGATATTCACGTAATGTTTTAC ATGAAATCACCCAAAAAGGACTGGGTGTTTGCTAATAACTAATTTTGAAC TTAAACAATTAACTAGTGGCAAATAACCCGGCTATTTTGGGTGTTTTCGT GTAAAATATTGTCATGAATACCATGAATTGTTTGAGTGCAGGAATTGCTG TGGAAAACTTTAATGCTAAGAGGTTCATACTCATTATctgatgacatcaa ttttttctatttgattTAACTACAGTGAACAATATGATAATGTTCATTAT GTATACCTCCTGTTCAATAATTGTAGATCAAATGTCACAAATACTGGCCC TCCGTGAAGAAGACACCCATGAAATTGATGGATAAGTAAGAAAAAGAAtc ttacagttgacgctctcttattcgattttcaagggaaatccaattggatt ttcatcaaatagtAGATCTTCGATTAGGAGAATTCCTTGTTGATGATAAC TTAaatttatcgaataatggagcgtatcaaATAGTACAACGTTGTATTCA TTTAAGAGCCTTATAGTTTCTTGTAAGGGTGTCTTCTAAACTGTTTACCC TTTTTCTTTACAATGGACCCCGTCTACCCTTTTTTCATACTACAGttgac tttctctaattcgaacttcagTGGACcaattattttctttgaattaacgt ataaagaaagattcgaattatggagagtaTCTATCTAAAAAGTGGATCAA TTTTCGTCAAATTTCAAGTTATTAGATGTTCGAAATTAGAGGGAGTTTAC TATATCTTTTATGCTTTCAAACATGGTCGTTTTTTTCAGGTTCACAGTGG AATTATTGTACGAAGAATTCAATGGGAGTTACATCTATCGGCAAATTCAA ATACATAATGTGAAGGTATTCCCCATCAAGAAAGTTCAAGGCTGTATATT ATTATCATACTGACTGAACGGATTTATCATTATCAGTTTATCGATTATCG GTAATTTGTTTTAATTCTGAGTTTCATCGTAATCACTGGTATGAAAATAT ATTCTATATAAGGGAAAAATCAATATATAATAGCCGCTTTCTTTTTAACC GTTCAACATNTATTCTATAtaagggaaaaatcaaaatataatagccgctt tctttttcaccgttcaacatattCTATATAAGTGTTAtgtcgagaaaaaa aatatctcaaaattaagttttcgtaattttccttttttcaacaGATGGAC AAATCGCTCTTCATAACACAAGCATGCTTCACCCAATGGCCTGAAACTGG CGTTCCCAAGGTATGGTTTTCGCTATCAGTTTCTTTCACTTTTAGTCATA TTATATTACATCATTTCATCGTCTgcatttttattttaacattgaTCTAC CTAAAGGGAACTAACTTCTTCGGCGAATGGCTGGGTAAATTGGTTCTTTG TTTgctcaaaaaatagtattttagaccaattttaggggttcttttacaaa atgatgaaaaaacttGGCGAGACAGCATTTTGGCAAACTTCGCAAAATTC TGACACTcactaaaagttaaaaaagttatTCGTAATAAGGGTTAGGTTTC AAACAAAATGATTTTAGCTGCATTATTTTGTCTTCTTTAATGTACAGGAT GCAATAGAATTTCTGGGCTTCATGAAGTTTGTACGCAATTTTAGCAGTTC TTCAACCACTGTCGTTCATTGCAGGTAACCGAacaatttattattttcag tcTGAGACTTTCTTAATATCTGGTAGTCTTTTATGCTAAACgactaaatt gaaaatatgtAGAATACGATAAGGAAAGGCATGTTGAACAAACTAACACT ATCCCGTAAGAATAATGGTGTTTTCATATATTAcctatattactgtatta cacggatcATGACCGACTCCAGTCTAAATGTCTGGAAAAAGTTAATATTG TCCCATAGTTATAGCTGTGAGTTTTAAATCTCCCCTTTCTCCTGACTTTT CATCAATAAAGCGGATTTTTATGATTGTTCACCTCTGTTAGTGTCGGAGT AGGGCGGAGTGGAATCTACGTTGTCTTGGATGCCATCTGGAACTCTGTCG AACAAGATACCAAGGTCAGTACAACTACTTTTTGACATGGTGAAGTggaa atttttcacaaaactcTTCTTGTGAATCTGTCTTGTTTTATGGcgtagta gtgtagtggttatcaaccTTGATTCTCGTCTGggaggtcagggttcgatt cTCACTCGGTGCTATGATTCACTTTGCAAGTGAAttgtaccttcgcccgg gtcgaCCCATGCCTTGTGAGGGGAACtgggtaccatcactctgataaGAG AGTATGGGGAGTATGTCAGGCATTGCATATGGTATGGTGAAGAATACTCA TAGGCTCAACACCTTCGAAGATGTATGTCCTCCCGTGTAGTTTGAGTATC TGTAATAACTGCAATAACTCCGTCGTGTCGCGAGTGCAGGTGTCTGGTAA GCGTGTTAATTTCCCTATCCTAGGGTAGGTATCTATCCAGGGATAGGGCC CATTCCGAATGATTCGGAGGGTTCACTTGTCTTGTCTCTTCTCATAAGAT GGTTACATCAAAATTACTGAAACACTTAGTAAAATTGTTTCCAATTTCaa tttgtatttttagataGACATTGCGAAAATGATTCAACAAGCTAAAGAAC AACGCCAACTTCTTATACAAACAaaggtaaaattttgaattactGTAAAA CGATTAAACATCAAGAACCCGTGCAAAACGCCTGGGCCCACAACACCCTT TTCTAAcgtttttttaggaaaataaaaaGGCAAACTAAAAGATttaaata attgaaattttaaacctAACTAAGTCACAGCACAGGACAAAACCTAGAGA CAAAAGGCTGCACAAAGTGTGATGGTTATTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027574TCONS_00027574Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027574-proteinTCONS_00027574-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000635supercontigsc0000635:137377..146109 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.86 8.21 20.57 20.03 46.47 32.92 22.14 25.47 12.76 15.96 13.64 11.46 11.46 11.15 7.35 10.43 14.27 15.79 8.33 8.18 14.37 14.91 12.46 12.34 16.54 16.35 22.93 19.13 9.99 9.41