XLOC_015507 (gene) - C. hemisphaerica

Overview
NameXLOC_015507
Unique NameXLOC_015507
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000631:2078..6613-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015507 ID=XLOC_015507|Name=XLOC_015507|organism=Clytia hemisphaerica|type=gene|length=4536bp|location=Sequence derived from alignment at sc0000631:2078..6613- (Clytia hemisphaerica)
AACTGTAAAAGCGTTTTGGTGCTGGGGCGCACGGAGGGCGGTCCAGGCGA AAGTTGGGTGGTAGAGGATAAAAAAGACTAGGACGAGGCGGGTTATTCAT TTTGCGCGGTAAATAGAAAACGAAAGTACAAAGGACGTGACCCAGTGCAG ACATACACGATAGGTGAGGCAGATGTTTTTTTGATATATTTCTTTTGTTT TGTATTTAAAGTATTGAGGTTTATGTCATGAAATGATGCAACTTCTATAG TCATTGTTTATTGACATGTTAAGCATGTTTATGAATGACGTCAACTGGTT ATTTTTCAGACTTTATATACGTTATAAACATGTCTGAAAATCAGCAGCTC GTCTGCAAAAATCAAAAACATGCACTGTCTCATGAACTTGATGCTGANTC AGCAGCTCGTCTGCAAAAATCAAAAACATGCACTGTCTCATGAACTTGAT GCTGAACTTATATAGCCTCATATGTTGTAACTTACATGAGTCTGAGCTGG CATTGAAGGAGCAACAAGTAGATAGAGCCACTAGAAAATGAAATTTGGTT TGATTTGACAGATTTTCATTTTCTAGCTAAACGTTTTTTAGAAGTTTTTA ATCCTTGGAATAAAGGGAAGATTCATGTATTCAGGCACAAAATAGCCCAG TTTCAGGCATTCACGTAATCAAAAAGAGGATTTTCACGTTCACGCAAATT TTTTCAATTCATGGCATGCATTCACAGATTTTTTATTTTCATGCATTCAC GCAGCCAAAAATACGCATTCACCCAAAATGCTGGGGGCCTTAATAGATAA CAGAAAGGTATTGCATGTAAAATTAGCAATCAAAATTATGATATGGTAAA ACTTTATTTAAAAGAAAATATGAAAGTGTGTTTGAATCTCTCTTTCTTTA TCTGTCTTAGGAGGAACCAGAGAGTGTGAGGTCTGTATGCTGTCTTTTGT CTCTTACCAGCTTTTCTAGATATTGGCTCATTAGTATTTTCTGCTAATTT GCACAATAATGCAAAATGACAATATCCAAAAAGTGACGAAGCCCAATTTT TGAAAAGAAAAATTTTTGGGCCAAAAAGTGCCAAAAAATGTGTTTTTGGG ACTTTGTGTAAAATTGCAAAATTGTAAGATTTTTTGCATAAAGACAGAGG TCAAGGTTCTTTTAAAAAGTGGCTGTAAGCTGTTTTTCTGGAAAATGTTT TTTGCCGTAAAATCGCATTTTCTTAGGGGGATTCCCTTTTCTCATTTTTA GGGCAAGTAGTAGCTGTTTTTCTATTTTCTAATTACATTAGCCTTCAGGT AGGTCCATTTAGCATGTATCTTTGTGTGAATAAATAAATTGTGATTCAGA TTGCAAATTAAAAATTTTAAAATAATTATTATAAAAAGTATTATGGATTT GACAGTGCATTTAGACAAAGGGAGATTGAAATCTGTACAGGTTCAACGAC CAAAACTATCATCTATTGATGATGTAATTATTGAAGTAACTCATGCAGGA GTTTGCGGGACTGATTTGAAAATAATCGATGGGAAATTTCCTGCGGCTGA AACTGTGATAATGGGTCATGAAATCACAGGTTTGATTGCAGAGAAAGGTG AAAATGTGACTCATCTCAGCATTGGAGACAGGTATATTTTTCAAATGATT TTTAGCACTTCTTTTTTTTAAAGTCTGTGTCAAAAAGGTGTGCAGTGTTT TTATTTTATAACTTCCCAAGCATTTGTTGTATATTAAAAAGGTTGACACA GGCTTTAGTAACAGTTACTGGATATAAAGTTTTTTTTAGGAATTTTTCCA CTATTATACTGTAGTGGTAGAAACTCAATTTGAATTTATTTGGTGAAGCT CAATTTTGATTTGTGCAAAAAGTCTGAAAATACCAATAAAAGCAGCACTT TTATTTATTAGGGTATGTGTCAACCCATTCAACTTTTGCTCAACTTGTTT ATACTGTGTTCGTGGAGATACACAATTTTGTGTACGGGAAGGGATGAAAA CTGCATTTGGAATCATGAAAGATGGTGGCTGGCAAAAATATGTTGTTGTT CCCGGCTCCCTTTGTTTTCAACTACCACAAGGAATGTCACTACAGGACTC TGTCTTTTGTCAACCTTTATCAAATTGTATACGAGGCTGGGATAACATGG TTCATGTTGATTTGGATGCACGGATTCTTGTTGCTGGTGCAGGTGAATAT TTTCAACTCTCACTCTTGTAATATTTATTGCAAAACATGATCAGCATTCT TCTATTGGAAAAAAATGTTTTTTCAGGGGTATATACAAGCGTTTTTAGCT AATTGAAATGCATATTTTGAAAATGTTTCAGGCATTGTTGGGTTATTATG GGCATCGCTGTTTCATTTCCATGGATATCGTGACGTCACAATAACAGAAG TGATTGATCATCGGAAACTAATGGCATCACGCCTTGATCTTGGTTTTCCA GCATTGAAGCCAGGAGATGTAAACCGAGAAATGAGGGAAGCTGAAGAACA TGGCAATGAAGCATGGGGTTTTGATTTGATTGTTGATTGTACAGGTTTGA ACCTTAAAATTAGGAAGCTGTTAAAAAGGATAGTCAGATGATTTGATATA TTTTGCCTGTAGAATCTTCTATGGTTCTGAATGAAACCTCCAAATGTTTT GACTAACATTTTCCCAGTCAAATGAAAGTTTGAAATATCTTTACATTGGT TTTTTACATTTTTTCTATTGTTTTCTTGCTCAAAGTTTAAGACTTGTAAC CTACATTCTTTAATATTTATTCTCCAGGTCAAAAAGAGGCTATTGAGACC CAATTCAAATGGTTACGTAAAGGAGCGACATTTTTGTTGTATGGAGTATG TGCGCAGGGTGTTAATCTAGATCTTGAAGTTTATCAAATCTATAAAAAAG AAATCACTATTGTTAGTTCCTACTTGAACAGGTTTTCATATGCACGGACA TTAAAATTGGTTCATGGAATGTCAAAGCGGTATTTAGATTTTAAGAAATT GGATGTTGGTGTTTTTAAATTGAAAGACTATGAAGAAGCTCTGGAAAAAT TACAGAATGGTGAATTCTCAAAATTAGTTTTTGAAGTCTGAATGGTTTCC AATTTTAATTTCATAAAATCTGTTGTGCTGATATGATATCTTTTGCGTCT TAAAAGAAATAAAGCTGCAATTTATTACTATACATTTATAAAGATCAAAA TTATCTTAAAATGACATTTCTTGAAAATTATTTATTTACTCATTATTCAC CATTGCTGCAACTTTTTTTATAATTATTACATATATAACTTCCAAGCTCA ACACACTGAACTAAAGCTCTTGTTTAGATCTGCAACATGTTATTTACATG TTTTAAAAGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA AAACGATGTCAGGAATTAACCCACATTATAGTATTTTAAAGGCTTTTGAT GTGCAAGCAAAACCGTTAACCGGCGTTTGCGACGACGGGAACCGTCTAGT TTTTTCTATTGTTTTCTTGCTCAAAGTTTAAGACTTGTAACCTACATTCT TCTGCATTCTTTAATATTTATTCTCCAGGTCAAAAAGAGGCTATTGAGAC CCAATTCAAATGGTTACGTAAAGGAGCGACATTTTTGTTGTATGGAGTAT GTGCGCAGGGTGTTAATCTAGATCTTGAAGTTTATCAAATCTATAAAAAA GAAATCACTATTGTTAGTTCCTACTTGAACAGGTTTTCATATGCACGGAC ATTAAAATTGGTTCATGGAATGTCAAAGCGGTATTTAGATTTTAAGAAAT TGGATGTTGGTGTTTTTAAATTGAAAGACTATGAAGAAGCTCTGGAAAAA TTACAGAATGGTGAATTCTCAAAATTAGTTTTTGAAGTCTGAATGGTTTC CAATTTTAATTTCATAAAATCTGTTGTGCTGATATGATATCTTTTGCGTC TTAAAAGAAATAAAGCTGCAATTTATTACTATACATTTATAAAGATCAAA ATTATCTTAAAATGACATTTCTTGAAAATTATTTATTTACTCATTATTCA CCATTGCTGCAACTTTTTTTATAATTATTACATATATAACTTCCAAGCTC AACACACTGAACTAAAGCTCTTGTTTAGATCCGCAACATGTTATTTACAT GTTTTAAAAGAAAATCTGTTGTTACTAGTATATGTTTGTTAGTATTTACA GCTCTTAAACATTGATTAAGTAGGTTTTGTTACACTCTTGTAAAATATCA CCACATGCACCTTAAACGCTAATCTTTTATCTTAAATTTTGATAGGAAAA TATTTTTGTGAATGAAATTATAATTTTTTGTAAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027512TCONS_00027512Clytia hemisphaericatranscript
TCONS_00027511TCONS_00027511Clytia hemisphaericatranscript
TCONS_00027510TCONS_00027510Clytia hemisphaericatranscript
TCONS_00027509TCONS_00027509Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027510-proteinTCONS_00027510-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000631supercontigsc0000631:2078..6613 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
58.9 59.01 52.66 48.43 37.05 27.23 47.14 48.94 41.12 45.55 34.08 34.21 39.62 35.36 50.53 56.87 28.85 37.22 24.47 37.12 17.87 17.82 33.61 29.71 33.92 28.68 34.95 19.08 35.16 30.97