XLOC_015246 (gene) - C. hemisphaerica

Overview
NameXLOC_015246
Unique NameXLOC_015246
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000607:110262..116388+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015246 ID=XLOC_015246|Name=XLOC_015246|organism=Clytia hemisphaerica|type=gene|length=6127bp|location=Sequence derived from alignment at sc0000607:110262..116388+ (Clytia hemisphaerica)
aagtcaTTATGTAAAAGatgaattaaaaacataaaatcaaattaaaattt
cgAGAATATTATATAAAACATAAGATAGAGAACCATGGCATTAGTTTATC
ATTACATGAAACACTTTGCCAACAAAACTTTGATGATGAAGAGCTCGATC
attttactttgctttctgGTAGCTTTAGCTTATGGAGGAGAAAGTGACAG
GGAAGAAAACTATGATTGTAGTAAGTATGTAAGACATAAGAAGTGTCAAC
CTCTTTCCCATGCCTAATTTCTCGAtgtaaataatttaaatttcacCCAA
TATTAATTCAGGTTGGTCCTGCTTGTAGAGCCCTGCCACTACAACTTAAG
CAATAATTTTGATCCCCAAACCAGTCAATCTACGCATAGTCACTTTTTGA
CGTAATACAAAATTGCTTGGgtgcaataaaaaataaaaaaacgcaAACTA
AGTGACTGAGCTCAAGTTTGACATGAAGAAACTAAATCTTACTTTTACAC
CATTTCTGAGAATCCTTgtccatttccctaagaaatcgggttTTTTGAGT
CCGCGaaactttaaaaatgttttttacaagctcttaagattttgtcaatg
gaagccttatgtttttatatagttagttctcataaaaaaagcttGTAGAG
GTGAATGAAGTTCTATCTTTCGCAGCTACGTTTTATTTTTTCGGTGAAAG
CCTCACACTACTTATCAAGGCCCAAAAATATGGAAATTAGTTACCCAAGA
AGTTCGACATCTTAATGACCTTAAGGGATTTAAAGATAAAATTAAACATT
GGAAACCAACGTTATGTCCGTGTAGAATATGTAAAGTCTACATTGACATT
GATGTTGTCGGCTTCATTTAAGAACTATATAAGTTGTAAATATGTTGACT
TGTATTAGCCTAGTAGCNAGTCACTTTTTGGCGTAATACAAAATTGCTTG
GGtgcaatcaaaaataaaaaaacgcaAACTAAGTGACTGAGCTCAAGTTT
GACATGAAGAACCTAAATCTTATTTGTTTTTATGCCAACGATAAATAAca
attacaaacaaacaaactactACCGACACTTTTTTCTTACTCCATCAGGT
TGTGTTGATGGTACTGGAGACTGTGATAAAAGATATCATTGCCCTGGTTC
TGAGACACTTTGTCCTGTCACATGTGGAAAGTGCGAGCCTACTTTGCCAC
GTAAGTAGTTCTTTTAAACATCGCAGAGCAATAAATATTGGAGAATGCAT
AAATTTCTATCAGCAGAATCATGTAAAAAAAGATACGAAAAACGTCGCTG
TAATTGGCTGAAAATTGCTGACATAAAcatatttctttcaaaataaccAA
AGTATTGGGTAATCTTTGCATGTCTCAACCAATCAGAGCGTCATTCGAAG
TTGTTTCGTggatttttacatgaatctgctaataggaaatttttgaattg
gttgaaaaaaggtttaacatattatttgatattgaaaaatatatgcAACC
TTCTTTCCATAATTAATTAACCCCTTGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggg
gggtccgaataagcagagGGGTAAAGATGGGCGTTTTCCCACAGCGCGGG
AATGAAGTTGTATATTGAAATCCCAAGGATGGAATTACATTGTTGTAAGC
CCAAAAAGTCTAGTGGAGATTTTTCACAATGAATTTCCAATGCGGATGTA
TAATCGAAGTCAACTTGCCGACGGGGCTGAAATTTATTGTTTTATGGCTA
AAATTATTATGGCTGGTATTTTTACCGTTTTACCACCGGGAACAAGATTT
TGGCCAAATCCCGGTGGGTCTGAAAGTTTCAGTGTTTTCCTCAGTTGTGA
AAAAATACCTTTAGTTATATTCATTGTTATGGATGTTTCCTGGCTGAGTA
TAGAGCTCCCAACCATCATTTTTTCTCTCCAAATCATAGCTTGAGTCTAA
CACCGAAACCAAATACTTCAAACTCCAGTCGTCAAAACGAATTCCTTTGA
CAATGCTGGAATGGAAAGCTCAAGGCATATTTTAAACTTTTGTAGTAGCC
CTGTTTGATTTTAGATTGTTTCCAACCCTTGGACCCTCCTAAAGAGCATT
TGTCGATTGCAGACACTcgaatcaaaatattttagatGAAAATGCACCAG
CCTTTCTGATATAAATTATATTATCCTTTTGACACGTATTTTTCctaaat
tatatttttcccTCAGCGTACCACGAAAAGAAGCATACAACAACACCGGA
GGAAAAAGCAAAGATCAACAGTAAGTTCCTGCAACTCTAGAATACAGTCT
ACTttaatttgtaatactttcgcaAGGTAAAATATActtccttctcacag
acccactaggaccccttcccactggaaaaattggttaaaatatTATCCCC
GGCGGAAAATTATCCCCTAATTACCTTCACTACAAAATATTgagctattt
ttcccatcccaccggattttctgacttaaaactTAAGAATTTAaatctcc
agccataaaaaatatgggaatatcaatccctatcgagtttcagtccgttt
accccactggctgaaaaaaatcctatTGGGTCTGCGAAAAGGGGGTGTCA
AAATTAATAAACTCAACACTTTTTAGATATGTGTGCTGATGAGCATAACA
CTTATAATGGTGTCCATTTGATATTTGATAAAGACATTGCTCACTATGCA
CAACTTCGTGCTGAGTATGTCGTCGAACAAGAAGAGCTCGATCAATTAGA
CAATATTCATGATCAATGTAAAAGAAATTTGTTCCCTGAACTCAGATGGT
TGGTCGGAAACTATATGCCTTTCAATGTAGCAATGGACAAAGAAAAAGCT
TTTAAGCGTGCTCTAAAAGTTTGGTAAGTTAAACAAACTCCAGGAAATTC
TTATTTATCAAGACTTATTATTCTATTAAAGGCGTGGGTAGTTGCCGAAA
CGACGAAGGActattcaataaattgaaattcATTATCTGGAAACACATTA
TTCGTATGTTCTATGCTTTACACTAGTTATCTagttacagttgacgctct
ctaattcgacgttctactattcgatagactcccttatttgatgaaattta
aagtccccatcaacaagaaactttcataaacgacgctcccttattcgata
agcacccttattaagcttttccagaaaaaaaaccttgttgaggaggtcca
tttccgttccaagggggtgaggtttgaaatgcagtggaatttcataaggg
tagacgaaaatccgtcaaagataagcggaattccaagggggtaatNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
caatgagtctggttaaatgttactatatttacaagaaaggattactgaaa
aaatactactgtatgtactactgatgaactaaactcaaaaactaaaactt
tacctaAATTTACAatattacgacaatttaaaaatctatctttaatagca
acaaagaaaaaaacatggctcaaagttttaaaaacagagctagtcagagc
ttcaattcagtaggtatagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNatgtttcaacctgctacataacat
tggtcagtcgggtctgctactaacatgtaatagttttattatagccgagc
ttgagaatccgtaggcagaacttgtaacatgttttatgtgtataattatg
tcagtcgacttgaatcacgatacattactcacatttcactggatgcattt
tcactgtgaaattatccgcaaaattttctgaccgcgttctgagacggagg
ctaatgattgaaaatttgtaaaaattcggaatacCAGAGGGTTaagatcc
taaaattgcctggaattctaagggggtaggtcacaaaaggttggacctcc
tcaacagggggtgcacgttttttttctggaaaagcccattcgatgaaaat
ccgattccccttgaagatcgaattagagagtgcaACTGTATATGTTATCA
GATATTCCATAGAGCATTGTTGAGTATCACATAACATGATTAACATCGTA
ATAATCATATTTTTGTTCTTtagaattttaagtaaaaattcaatttgaat
CAACGACAAATTTTAGCTCCCAATCAAAGAAGCTGGACAAAAGTATCCTT
AAAGACTTGTAATGATCTAAAGGATAGAAACTCGTTAGCTTTCTATATAG
CATGAGTGAACATAGATTAGAGTTTGAGAACATAGACTGAATTTTGCTTT
CTGATGATTCTGCTGgtgctgagtccagtgaagtaaaCTAGAAAGAtttc
gccatcttgaattttaactttcgttttcaaaaattattaaaaacaccaaa
acaataaatatattctaaattttctgaaactataataaaatcatgaaaat
acctctaaaatttgaaaaagattggTTCATTGGTCAtggttttttgtttg
tttttctttaaaaaggaactggatctagtggcatggatttgctaccacct
caagcaaagccaaaaaatggaGCCTGACAAATTACACCGGGCCAGTGTGA
ACACATCAGACATAACAAAGTTTATAATTTAATAATCCAAGCATTTCCAC
ACTTccaaaaagagatttttttttatcacTTACACAACATTTCTTTACGC
TTAAGGTATGACGAGAAAGATTCAAATGGAGATCAAAGTCACTACGAAGC
AATGACTGGTCACAGTTTAGTCGGCTGTGGAGTTGCATCAAACGAAAAGA
TTACAAGAGTTGTTGTCTGGTATGGCACACCCAAAAGCAAATCGAAGTTT
ATCAACGACGAATTATAGTTTTTCAATACTTGTAAATGGTCTCCTTCATC
GTAGACAAGACCCTTGTGTCACAGGCCCAGTGGGAAATTTTGTCCAAGAT
GGAAAAAATCCCATAATTTCAGCCCcattgaaaattgactttgttcTTAT
CCCCCCTTAAAATTTAACTAGATTTTTTGACCTGAATTTCTAAAGTTGAG
ATTTCGTAAAGTATTTCCAAGTTCATTGTGGAAAGAAGTTCAAACGGGGC
TATGAGACAGAAAGAaaactcaaaatcttgaaaagagCTAAAATTTGCAG
CAAaaccttttgtcatttttctctACCCACAACAAATCGAGTTTGTTTCA
CTCCCACATTCGACAAAAGTCAAACGAGGCTGAAATTATTAGTCTTCAAT
TGTATGTTATTATTATGTATCATAATCATTTCATTCGCAATACAGGGTGA
ATTTGATTTGTGTACAGGCTTTTTTTAATGTTCCAGCCATCGggcattcc
attttatatccatacaggtgGTAAACGAACATTTCCAAGGGGTAAtctga
gaagaatttccagggggtccaaggaaagttttttttggtTTCCATCAAgt
aaaaagttattttaaaacTTCTAGTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027125TCONS_00027125Clytia hemisphaericatranscript
TCONS_00027126TCONS_00027126Clytia hemisphaericatranscript
TCONS_00027127TCONS_00027127Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027126-proteinTCONS_00027126-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000607supercontigsc0000607:110262..116388 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25	0.12	0.28	0.49	0.27	0.14	0.74	0.92	0.45	0.57	0.13	0.2	21.33	18.11	0.41	0.52	31.58	28.88	34.53	36.73	94.16	93.2	12.15	17.06	20.81	16.77	134.45	145.76	0.61	0.58