XLOC_015190 (gene) - C. hemisphaerica

Overview
NameXLOC_015190
Unique NameXLOC_015190
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000601:133728..138527-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015190 ID=XLOC_015190|Name=XLOC_015190|organism=Clytia hemisphaerica|type=gene|length=4800bp|location=Sequence derived from alignment at sc0000601:133728..138527- (Clytia hemisphaerica)
CCCATTTGGTGTTACGATTCACTTGACAAGTGAATGTACACTACCCGGTT CAACTCATACATCATTTTAGGGGAGTTTGGGCATCATTCTCTGATATAAG AATGAGTGGAGGCATGTCAGGCATCGTATCTCGGATGGTGACGTTGCTCT TATTAGCACTCGCAAGAGAAATCATTCTCCTATACCCTGTTCAAGAAAAT GTCTTCGAGATTTCGTCCGTATCGGTTAGATCATCATTCTTTCCTTTATA ATTATGTTATCTGGTTCTTTACAAAATGTAGTCATGAAATGAAGACGAAA TACTTTCTTTCATTTCTTTCATACAATTTTACCTCCCTTTTGTGTTTTTA GCATTTACACTAACTCATATGGATGAATTTATAGACGAACTGTTACATGA GGAAAGAAGTTGTGATATCATATTACCAAGGATACAGGTATACAGTGATC AGTGTACATTTTATAATGAAAAATTTACCCATCTTTGCTACTTTAGACGT ACAAACTTTCGTGAGCAGAAAGTTTCGCGATTTTAGGAAATTTTTATCCT TTTCACAGAAGCAAAATATGTCTTTCAAATTGCTTACTAGAGATTTGCAA AACCTTGAACGTTCGCAAAAAACTTTTGATAAAGATTTCACCTATTGTTT TTAGGTTTAGCCCAAACAGCTTTTCTCAAAGGACAGCAATTTCAATGTGA AACTTTAATCCACTTAAGGCACATTTTTACATTTAGTGTGGTCGTGTTAC AAAAATACAGGCTGTTTGTAGGAAAAAAATAAGATCTAGCTGAAACTTTC TCCAGACCTTCTCTATAGGATGCTTATACCTCTGAATTCACGCAGAATAT GCTATATATGGTCAATTTTAGACCAAAATTTGGCGAAAAGTGGAACTTGC GCATGAAATATCTCGAGTTAGGTAAGGAAATCGGCTATAACCGTTTAAAA GTCTTCTATATAGTTTTTCGAGAGCTTTCGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGAAAATGAGTTTGAAATTTT CAAAAAATTTCGCCCTTAGGATTTTGCCTGGGGAAAATAGAAATTGCCCA AAAAAGGGATGTTCCACCAGTGGGACTTTAGGGGATTTTTTCCTGAGGCA TAACCATCCTATAGAGAAGCTCTGGAGAAAGTTTCAGCTGGATTTTATTT TTTTCCCTTAAATTATGCTAGACAACCCCACTAATTGGAAAAACATCGAT TTTTGTTACTCCACTGAACACAAAAAAAACTTTTACTCAATAAAAACACC GTTTTTCTTTTTATAGAAACGCTACTTACTTGAAGATAGTGAACAGCTAG AACCAAGGGTAAGTTTAATTTTAGTTCTTTATCAAGTCAACTTGGTACCC AAGATAAGGTGCAGTATAAATATACTCAAAACTACTTTTTGAATGTCTCT GACTGTCAGTTCTAAGTAAACCGGTAGATTTTCTGCATTATAAGACTACT TAGACTTGCCATAATTATATTTATTAGACTTATTTTCGCGCCTTTTAAGG GTTTTTCAGTAAAAGCGTTAGTTACCCAAAAATACAACTTTTGCAGATTT GGAAAAATCCCTAGGATCTCTTTGCCCACGAAAATTTATCTCGTAAAAAT AGTTACATTAATCGCCAGAAATAGACTTGAGGATTTATAGATGTATTAAT TATATTCAACATGAAAGTTTTTAAACAGAAGACCTTGCAAATGACTGTTT TCGTCAAAAAAGAGAGATTGGATGTAGTTCTTCATTCATTAGACTTACTC CAAAAAACAAGACTTTTGTTATAAAAGTATAAAAACGCACTGTCATGTAT CTTGTTCTTTAGATCAGTGCTTTAGAAGATGATTTAAATGATCTTGAATC AGACGACGAACCTGAAATGAAGGTTAACTATTTTCTTCTACACTGTACTT TTGATTCGTTCACCTTAGAAAAATTGTGTCAAATAATTCCTCTAGTATGC AATGATATGAATATATAGGAAATGATTGTTCTTCTCTAAATGAAACTGGG GCTTTCCAAATGAAAACGGGGCTTTTCAAGTATAATATACAATTTGCTTC TTGGGCTCTTGAAGTTTGCTATTTCCAAAAAGGGATCTGTAGTTCATAAC CTACTATAAAGTATTTAAGGGGTAAAACAAACTGAAAAAAAGGATTATTT ATGTCAATGAAAGTTCATATTGTTGTGCACGTTTATAATCGGTAAGTGTT CTCCTTTGTTCTGCAGGAAGATTCACCACGTCGAAGAAGCGTCTCACCTG AAGATAGACGCAGAAGAAGTCGATCGCCTGACAGGAGGTAAAAGAGAGTT TNTCAATTGAAGATAGACGCAGAAGAAGTCGATCCCCTGACAGGAGGTAA AAGAGAGTTAATTGTCCTTTGTTTATAGTATATGATAAACTCGGGCATCT CTCACAAACATCACAGGTGAAGGTCATAGATTTATAAAGCCCGAAGGGCT AGATGGAGTATTTTTGCTGAAAAGTGTGCCTTGGCTAGGTAGGAAATCCT ACCTAAGTGACGTGACATTACAATAGAATTTCAGCACTTGACCAATAAGA AGCTTTTGCGGGTTTTCGAAAACAATAGCAACAATATTTTTTTCCGATAT TCACTTTTTTAGCCTGCGATGGCTTAAAGTCCGATATCTAGCCCTTCGGT CGGGTGAAGTTATCTTTGCTTGATAATGTAGTTTTGTATGCCGTTTGATT AACCCATCTTCTTATCTTTTTTGCACTAGGAGGAGATCCCGATCAAGATC TCGTTCAAACTCACCAAAACGTCGCAGTAGAAGAAGGTACAGTTGATTTT CNCCCGATCAAGATCGCGTTCAAACTCACCAAAGCGTCGCAGTAGAAGAA GGTACAGTTAATTCTTTCTACATTAAAGGAAGAAATTTTGGCGGGAATCT AATTTGGCGGATGACCGAAAAAGTTTTTTTAGAGGGAATTTAATTTGGCA TTTAACTTGAAAAATTAAATTTGGCGGGGATTCAATTTGGCGGACGAAGG ACATCTTTGTCCAAAAAACGCCATTAAAAAAAGAAAAACATGTTTTAAAG CCTGATATAGCACACACATTTGGGGGAATAAATAGAGCAACTTAAATCTG ATGGGAATTTGATTTGGCCGATGACGGAAAAAATTAGATTTGGCGGGTAC TTGGATTTTGACCGAATCCGCCAAACTCGCCAAATTTTCTTCCCGCCAAA ATTTCTTCCTTTAATTAAATGTAATTCAATTTTCAAGGGGAATTGTCGGA TTTTCTCTATTTTCCCTATGAATCAGCCAGGTTTTTGTATGATGTCATTT TTTTCTTTTTTAAGATTTACTTATGAAGCGAATTTCCCTCTAATTTCACT CAAAATACATTCGACTTTCTACTAAGTGTAATTTCGAGAGTATGTTGTGC TCTTATGCTCTACTGTATCGCGACGATCTGTAGTCGGAATTTATCGGATT CAAATAATCTGTTATTGTTCTAGAATTTTATTAACAAGCTTAGTTTGTCT TAATTAAGCCCTTGATGCAAAAATTGCCGTTATATAATATTTAGAAATAT TTTTTCTTTTTTACAGTCCCAGTCCTTCTCGGCACCGTAGACATCGTAGT AGAAGTCGTTCTCGATCTCGCTCACCCAGACACAGTCGAAGACATCGGTC AAGATCTCGATCGCCCAGAAGAAGTCGACGCTGAGATATAAAACAAATTG AATAACAATATCCTGGGTAATTCAACGTTGAGCGTCACTAATTTCGAATA TTATACTATTTGAAACCGTAGAACTTTTTAAATGGATTTTTGAAGAATGC ATTTCATAAACTGTTGTTAAACTTACGTGGGAGGAAAATTTAGCTTGCTT TTGAGATTATAAAGGAAAGCTGGCGCACACTTGGAAAATAATGAAGACAA CGCATTGCATGTTGAATTTAAAGCACTTCGAAAATTGTATGTACATAGAC ATGATGCAAAAGTAATCAAAAAGGTTTTCTGCCTAAGGTGCAACGTGTTA CGAGATAACAGAAAACTGAAAGTAGAAACTTGAAATATTTGCATCTAGAT CAATGGAAATTTTTTTAACGTTTATTAGTTAAAATACAATTCATTTTGAG AAATTTGAGGATCGTACCTTATATAAATTCATTTACACTTTTTTTTCCGT ACACACTGTATGTACAAGAACTTTCGTCAAACATGTTTAATAAACATGCG ACAGCAATTGCCAATTAAAACAAAGTGCGGTGTGTGCGTTCGTTATATCT TGCTCCGTCTCAGCAATAGCAAGAAAAGTCATGCGCATGCCCAAGATGTT GTGAGCGAGTGATGCCATATTCTTGTGCTTTGGGTCGAGTCAAACATATT GCTATTTTCGACTTTCTCGTGTTAAAAAATTACCCCTTAGCGAGATTATT TGTTACTATTCTTAGAGAGAATATTCGTTTTAAAGAGAATTTGAACAGAA ACACGTTGTCGAAATAAGTACAGAACCCTGGGGACAAAAATTGAAGTATG ATTTTCCACCAGGGACGATATTTCGGCCAATTTTTCCGGTGGGAAGGGGT CTTAGTGGGTCTGTGAGAAGGGGGTATAAAGGGGGTGTTTAAAATCGATA GATTCCTTCATAACTGTTCAATTATCAGTCATCAAAATTTGTAAGCAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027042TCONS_00027042Clytia hemisphaericatranscript
TCONS_00027041TCONS_00027041Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027042-proteinTCONS_00027042-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000601supercontigsc0000601:133728..138527 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
60.92 60.85 63.01 59.12 35.34 24.91 27.78 28.26 21.79 20.67 15.99 13.86 10.01 9.6 11.53 11.43 20.43 18.61 6.05 7.76 13.15 11.71 31.21 26.23 15.11 17.04 8.61 7.79 18.17 18.62