XLOC_014959 (gene) - C. hemisphaerica

Overview
NameXLOC_014959
Unique NameXLOC_014959
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000576:26170..35139+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014959 ID=XLOC_014959|Name=XLOC_014959|organism=Clytia hemisphaerica|type=gene|length=8970bp|location=Sequence derived from alignment at sc0000576:26170..35139+ (Clytia hemisphaerica)
TCCGCTCGTAAGTATATTTCAAAATGGGGCAATAGTTGCGACGAATTAAT TTGCACTTGTGATTTCTGCTCAACAGAGACAAAGATAGGCATCGgttaaa ctttgaaattttcagtacaCAAATGGCTTTATTCAAAAGTGACAAACAAC TATTTCAACTcattcagataatattgatgCTTAATGTTATTTCCTGTGAT GATTGTGGCCCATTAGGATACAACGCGATAAACCTGCTCAGGTAATNTTC TGAATATGGTTGCAATTAAACCTCAATTAAAACATATGGCGGTGATGAGA TGAAAAAAACCATCATAATATCTCACCAAGCGTTGAAGAATAGTTATCAT TGATTACAGTTTgtacagttttttttctttcctttgatTCCTCATCTTTA CCAAAGTTATCATCAAATCCACAAACGCCTCTTCCAGCATTCACGTTATT TCCCCAAGGATCATCTGGATTCATTTCTTCAAGGCTTTCTCTCCCCAGAA ATACATCCAGAAACTTTGAAGTTGATGAAGTTTTTACCAAAACCTTTACG CTttggtggttgttgttgttttgattttcgaattttactttcactttcac ttttgaaGAAATATTCAAGTGTGGCGATAaaaccaaaattgttaaatacC ATATTTTTCTGCAGTCAATATTTACGGGATGATTTTTAACTCCGCTCGTA AGTATATTTCAAAATGGGGCAATAGTTGCGACGAATTAATTTGCACTTGT GATTTCTGCTCAACAGAGACAAAGATAGGCATCGgttaaactttgaaatt ttcagtacaCAAATGGCTTTATTCAAAAGTGACAAACAACTATTTCAACT cattcagataatattgatgCTTAATGTTATTTCCTGTGATGATTGTGGCC CATTAGGATACAACGCGATAAACCTGCTCAGGTAATATTAAACTTAGTGT TATTTCCTTTCTGTGGGCAGAACTTGTTGGGTGTAGAACTCATTTTAAAC AAATACCCAAGCAGTCATGTGGACCTAGTATCATTTACAGACTGAGCTTG ATTCCATTTACCTGATGACAGATGTTGAGTTTTCCTGTGGACAGTTCTGG CTGGCACATCCTTGCAATCACAGTACATGCAACGGGTTTCACATACCCAG TAAATGTGATAGGATGTGTGGGGCAAAACTATGCTAATTTGACGTTCAAA TTAAatatggaagaaaaaaattagggCAGGGGAGCCGGTTCTCCAAACTC GACTTGCCACAGAAAACGTCAAATGGATGTTTAGGGGGTAGGGGTATAAA TTGTTGATGTTCTTTCctggaaaagaaattttcaccagGAAAATCAATTT TAGAGAGTTTCATTCCACCAAATGTTACTTCgccatgtttgtttttgttc gCTTCGGTTGTTTTGAAAACCATAACAAACAGCCCAATGTTTATGCCTTG GGTTCTCTTTGTTTAACGGCTCGTGCAGCCCATAAGTTTTTACAGAAGGC CATTTTTTTCTGTTGCTTTATTATATTATAGAGATAAAAAATTCCAGGAT TATTGgtgaaaaagtttagaaaatatctctgttattttctaaattaaaaC TATGtcatagtgtccttcagggtctcttcccccccatccctagaatgaaa attttccattcccccccTCATTTTTCCCCACCCTGCCTCCAAAAATTTCT CTGTCCCCCCCCCtcaagcaaaaaattaaaaagctgtaatttgatgaact taacgcttattgttttccctaaggtagttctaattcaagaagAAATGGAA AGGATGGTGTTAACCGtaatattaataaaactaagcattatgctatatca tctcataaaaccagatgtttttcaattttgaattgattttggtgagttcc CCCCCCCTGCCTAGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc cccccccccccccccccccccggcttcaaaaaaaattctttcccccctat acgtccttttgacctcaaaacccattcccccctgaatccaggggggggga ggacactatgtatGTGGTGGGCCGTAGCAAAAATAAAGGTGTCTGACTAA ACAACAATGGAATATTTATAGCGAGTGATGGGAGAAGGGTTCAATATTTT GAGATAAAGTTGATTGCCATGGCCGACGTTATTTGAATAGGGGGTAGGGG TTCGAAATCAAAACGTCCATATTTGATGTTTTTCGTGGCAAGTCTGAGTT TGGAAGGCTCCCCTTACCCCTTGGAAAAGAATTTCACCTatccaattttc tgaaaaatacaattttatccATTTACCTAATGCAATACAGGGTATTAGTA ACTTTCATCTTCTACCCATTGCATTTGGAACCGAATGCAATTGCGAATAA TCCCattggagtctctataacttgaAGATGCAGTActtttagggtactaa ctgctatGAGGGGTGGTGtgctttaaatttcaaatcaatcaaatgGTACT TTTTGGGTACTAACTGTAAAAATAGCTGGTCTTATCCAAATcaattttta agcctttttcAATGTAGGAAGCTTAATTTGTCTTATTGTCCAGACTTAAC AAATTAGCTCGAATCTTAATTGCGATGTAAAAGATtgcttgttttgaaat tgtgtGCAGCTACTAAATTACGTCATTTTGATTTACGTTATGTTATGCTC CTCAgctatctttttgtttttatcaagttaCGCagcattgcaatgtcttc ttaacCCTCTTGCACCCAGTCGTTTGTCAAACAATGCAAAAGTGATGTTT TTCATTTCTGGGGCTTTAGATTAGCAGTGGGCTATagagacttttttttt caaaattaagtttgcataattttttttggtctgTTGGGACCCAAATAACA CAAATCtgagatattttttgattttttcaatttttgacggTTCAAATTTT ATCCTTTTGTTGGTCTCATAttcttatttcttttaaatctttatattttt ctatctgaaatgaaaatcaaaacaaactatcAATATCAATTTCTGTAAGA CTTCACTACTAAATCAACAAAATGAAGATTCGTCTCAGATGTGTATATAA TAGAACCAACACAAACTGTGAACTGtcaatgtcaaaagatttattaaagt gataatgtaatgtaatgtcttctttatgaataaaagcaatgaaatgtcTT GAAAAACTTACAATgcaacaaaggaaattttaaaaagttttgtttgttcT GTTTTAGAGACTGTTGTCTCAAAAGCCTTGCAATCAATTCATTCAGTCAA GAATCATTTGCAATTTGGAACATCTTACAGTCTTAGCAATGCAATAActt cttttttatatatatgCAATACAATAGCTTCAAAAAGTCagacttgaaaa attaaaggctTGTGTACTTTTTAAAGCTATCTTTCACCTAAACTAAGAAG AAGCTACCCCTGTGAATAGCAATTTTTGCCCTATGATACAAATTCccctt tttcacaaattttttcaGGGGATCCAGTGATATAATTGTAACTTTCCAAT CCTGCTTTCttccaaagaacattttaagcctaatttgaggtttgtagcac caacagaacagattttaggttttatttccaggcaaaaccccgTTTTCCCC TGttttcggtcaattttggcctaaatacctgaatttataaattttatatt tatgGTAGAGGTACATAATTGTTACATTccaatcctacttttttccaagg aatattttaagcctaatttgaggcttgtagcatcaacagaacagatttta aatattttcctgGGCAAAACCTCGTTTTTTCGTGGtttcggtcaattttg gccTAAATACCTAATCATTTGAAGTCTATGTATATGGTAGAGGTATATag ttgttacattctaatcctagttttttccaaggaatattttaagcCCAATT TGAGGGTGGTAGCACCAACAGAACAGGTTCTAGGTTTTTTATCCAGGCAA AAATGCCCGAAATTGGCCAATTTCGGGCATAAAAAAGGCAGGAGAAccgt caaaaattgaaaaaatcaaaaaatatctcaaatttgtgttatttgggtcc caacggaccaaaaaaaattatgcaaacttaatttaaaaaaaaaaagtctc tatAGCCCACTGCTATTTAGATCTAATAATATGTTGGGAAGACTTTATAT GTTAGGCATAATAGCTTTGTACCTTATATGCTTGGCTCTGCATTTATTAT AAATCAAATAGAGAAAAAATACCAACGTTAGTATAATGTCAACTGGGCTA CCTAGGGTACTAACAATAGTGCCAAATTGGTCGGTGTAAAAGATTCTCGG CTccgcctcgttgaatattatacatcacctcgggttaataaatctcaata accaactttcacccattgaatatctgcttattgttctgatataaacaaaa aaaatttttttttcttctttctgacaaattttgctccacatccgtgtcaa tccaatgtgaaaaagcttataaattaaaattgatgagtaagcaaacgata tcactcttatttaaaaccaaaacctttatgaaaaatttcaacaaacAAAT AGTGTATTTATTTACTTTACAAGATTTTTGTTCCCCTTCAAGAAGAATTA TAGTTCAATTTTTATCcattattcaatttttaggccGAACTATTGGTTTT TCGATTTACCATTCGATCACTGTCCCTCGCTTCCTGAAGACCATCGTTAC GGTAACGAAAGCTTTATCAACCCGGAGAAGAAATGTCGCATTTATTTCAA TTTGTGTCAAGACCAAAAATACCAGTGTAGTGGTGCCATATGTGCTCGAT ATAACTTTGATTTGGTGTCACTAATGGGCGCTTACGAAGCAGAGATACAT CCGTTCCATGAAggtaaagctttttaaaaagtaccaattttccaaaaaac tcTTATGTTTTTATTATGCTTTCAAAATGATGGAAAATTTCTCAGGCGGA ACATGACTTAAACATTTGAACATTTATTTAACATTTGATAGTCAGTATGA CTGTGGAAACAATGTTATGTACCTTTTCGTCAGTGTTGAAATTCCAATGT AAGAAAAGTTTGtgggtttcaaattttttcaaatctgaTCCTGTTGAAAT GAGTTATCTTGATAAAGATTTTCCCGAGTATATAGTTTTAGTTTCAGTGA CTTTGAACCTATTTGAACTGAAAATTTTAATACtggaaattttctttctt ctttgctAACCATTACTGCAGGTTTTATTCTTAACagtaaaaaattttta aattcactTTTCTTTCCTATCCAATTAGGGAAACAACAATTTTCAGCCAT ATACACGGGTGAGAAAATCATGTGTGGAGCTTTACAACATCCAATGAACG TACAAACAAGATTCAATTTCATCTGCAATAAAACGGCCTTCTGGAACCAA ACTAACGCTTTGTATCATGGCGGGAGTATAGTTCCTCCTGGCAGATTGAT CAATGCTACTTTCAATAATATAACTTGTCAGGTTTGTCACTTATCTCTTT CGaacttaaaaaagacttaaaggCTGCTTTAAATACAGGCAAATTTCATT GACGAGTTCAATAATTCTCTGTAATTCTTCGAAACTCAAGATTTTCCATA ATGAATTTGTCAGGATTTTTAAAACATATTGGCTTATGTAAAAGATCTTT CAAAGCTTCCAAAGTTTATGGAAACCACTCTATTAACCAACACACAATTT TTTTCCTTTGTACTTGATTCACTTTGATTTACTGCCATACATTAGAGATT CTGAGGGGATATTCTGagaaaaagttttgaagaacTTCAGGCTAAGAGAA TGAATGAAGATTTAGTTAGGCAGGGCTAACTTTGGATAGAGAATATTTAA TAATATTTAGTTATCcatcttttcattttcaacagtttacggTGAATTTC AACTCAGCAGAAGCGTGTCCGTATATTCCACAAAACGATTCACCTACAAA ACCACTTAGCTACGGATCACTTATTCTCATACTGTAAGTGTACGTTCTTT ACAACCttgtccccgtgtatcccaggctttatttacgttataCTCTCCCT CTCTTTTGTATGGTTGACATCACCTTAAGTGTAGTGGAACCCATTCCCTT TGTGGCAATTTTGTGTAAATACCTATGTGGAAGAATTTCTTAGGCCATAT TTCACGGTCGGAAGAAATtctgggtaatcaggaccacaaTAAGAAAATAC CGAAAGAATTTTAGTTGGTCCATGAATGtggttttggaaaaaatgttttt gggtcTAACCGGTCTAATCCGGGGTCAGTCCTGAATACCAATGATCAATT TTAGCCGTGAAATAGTTTAAACAGACTCTTATACTATACTAATCAAAAAC TTATTTTGATTATAGATTCTTCCCTGGGTTATTATTGTACTTTATCCTTG GTTGTTTGTTCAATCGAATGCGAGGGAATGAAGGGAAAGATATGATCCCT CATCGAGCCTTCTGGACCGATCTACCTGAGCTCGTTATGGTAAGTCcatc gttgttttttttcaattgatctttttccaacctcgtccccgtgtatccca ggctttatttacgttactgatggtTGAACGAGGTTGATTTTTTCCTCCCG TTGTAGTATTTCCAACTGTTTTTCACTCTGATTTTTCAATACGTAGATAA CAAAAAGCATTTCTCCTTTTTAAACCTGGAACATTATTCTGGTTGGTAAA AAAAAGGGTTTTGACCGTTTCTTTTCTGACGGTAAGATGTAAATACGGAC TCTAAAGGTCAAGTTTCAGGTTTTAAAGTGTAGAAAAGGTTATAGGTAAG TCATGCCACCCCTCTGAAATCTCCCCAGTTGACGGACTCTACTCTAGTGT Ggcaagtaagtttgcgaccgcagtcggaggcgacccaacggcttctcttt cgatagctatctacaaTAAGATAGGGGAGGGAGGGCACCACtcttctccc tggattgctccacttacccttgatccttctcttaattgcttaGCATCAAG CAGAGTGGTTTCAAGTACCATTTTGCGAATTTTTGACCCGACTGGGGGTT GAaaccacaaccttgcgcacagtagctggatgctctaccactgcattACG GTCGCTTCTTTAGGGGGCGTTATTTCACTTGCAGAATTAGGAAAGGTATT TTGCTTCCTGATGGTCTTCTTTTGACCAATCTTTAATGTTCTTCATCTCA TTTCACAGGATGGATTTTTATTTACCATGGCAACAGTGACGTGTAAACAC GAAGATCGTTACGCTAAAGATTATGACCCGGTTCAATAGATGATCAATAA CAATTAATAAATGATGAAGGTCAGACATTTTAGAATAAGACAATAGTATG AACTCGAACAATTTTAACAGCGCAAATAAttagaataatgaaattttttc gacGTAGTAAATTATACGAATTCAGTTTATAGTATGGTAAATTAACGCAT CTATCGCTCCTGATTCTTCGTATACAttatctgtaaattgaataCAAAAC AATAATCGAAATAGACATGCATTGGAGAATATTGTGATTATAATGTGATT ATAAACTTGATCTGATTGTTGTCAACGTCTGTGAGATTAAAGGATTGAAA GTGATTAGGAATGACCAAACTCAATAATGTGTTGTTAACAATGATCGTAT GTCTTGGTGATTGTTTCATTTCAAATGCGCACGCGTAAATGGGAATCACT ATTAAAAGATGTTTATTTATCCTGAATGCGTGGCCGTGTTTTGTTGTTGG ATATAAGTGAATTGTCAATAAAGGAACAGTACTCATTGTCTCTTTTACCT TATTTCATTATGAAATAGGAGTAATGGTTTTGTTCGGGTCAGCCACATCT TTATCATGATATTAGCGGGGTTAGtatattcgagataaatcgaaggagat ggtataaagcaaagttgacatgtcgccaaaatcgccgtccactttgctgG ACGATGGTAAAAAcgccaaaataccgtcgtctgttaatgtgagcaaaggc gatacaGAACCACACATAATTTATCGGCTTTGTTTTGCATCGACTTTCCT tcccgtcgccctcgatattgtccgatacataaactcgttaTTAGCGAGAT TGGGTAGATAAATCACAAATATTGACGAATTTTCTCGAGCCTTCGTTCGC GCCACATCAGCTTTCTACAAGTTAATTGGAAAGCACCCGTGTGGTATATC CGCTTTGCTTGTAGAACGAAAAATTAGGCATCATTTCAAAGTGTTAACTA AGAATACTGAAGTTTGAGCTCTAGTCTTTTGGTACAAATTACATTGTAGA ATTATAAGATTCTTCATTCAGCATCTTTTTTGAGTTAAATTTCATGTTGa tcaatttaataaaaaaaatcgcgacttttattttttaattcccgtatttt tgtatttttaagtttttttttgtatttgggttaatattttttaagtctTA AGTATTTTACGCATTCTATTCTTTCTTACTCGTTAAACAACAAGCGATAT ATCTGTCGTCCACTTATAGTTGgaatgttgaaagaattttttattgaaac ttgTCTTTATCTTGACGGATTATTAGTTTACTGCGACATAATTTTTTGCG GACATTTTTTCCGAAACCGTgatatttttccgtacaattCTATACTCTCT CTAGAAAGTCTTAGCTAACATTTAGGTCATTGTAgctattttgacaattt tcttatacatacattttttttttcaatatgggATATTAGGAAAAATAGGA CTTTTCCCTTCACTAAATTTATAGGtatattttttaacaaagagATGAAC GGTAATGTTTTTACTCGGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026598TCONS_00026598Clytia hemisphaericatranscript
TCONS_00026599TCONS_00026599Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026598-proteinTCONS_00026598-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000576supercontigsc0000576:26170..35139 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.43 13.17 14.56 17.21 27.84 20.93 28.95 29.64 20.16 22.58 15.81 13.01 11.54 10.27 18.93 20.37 20.91 14.21 9.74 13.57 8.62 8.98 18.35 16.89 6.71 7.76 10.59 5.07 17.99 15.3