XLOC_014291 (gene) - C. hemisphaerica

Overview
NameXLOC_014291
Unique NameXLOC_014291
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000536:23142..27161+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014291 ID=XLOC_014291|Name=XLOC_014291|organism=Clytia hemisphaerica|type=gene|length=4020bp|location=Sequence derived from alignment at sc0000536:23142..27161+ (Clytia hemisphaerica)
ATTTACTAAAGTTTGATTTCTCgagaatttttttgaacattGGAATATTT
GGTTTGTGGTGGTGTATAGTCATCCGTGATTTGGATTGTTTTCTTGTGAC
CACAATAAGATGAGCCCGTTCACCATTGTCTTATTTTCGTTCACTTTGGC
GCTTCATCTGTTCATACTTGAAGCGACGCATTACTCAATAATCGCATTGC
TCGGCCGCCCGACATCATGGGAGGCCGACTATCATTTAGAAGTGGATTAC
GATACATGTTGTCAGGAAATGTGTAGAGCCAACGAGTCGTGTAAATCGTA
CGATCAAATATGGCAGCCGAGTCGTGATATCTACGAATGCCGTTTTtaca
gtaaaaattatcaagtCTTAAAAGCGGAAGGGGAGAAATTGGAGCTGATC
CCGAGAGTGCAATATTACTCTAAGATGTATCAAGTCACAAGCTGCGAGGG
CTGGTGGGAGGCCGGTGCAAGATCGACTGGTGATTACAAAATTTCCAGTG
ATGGGACAACACAATTTTGTTTCGAGTTGACGTCCTGTGATGATGTTGTG
AAGCAAGGTCTGTTGTCACCCAAAACGACATCTGAAGACTTTGGAACGTC
TCTTGGTGAAAGTGATTTTCAAATTCGACTACACGAAGCTGGAGGTTAGT
TGCATTCTCCTTCATTCAGAATTTAGGCTAATAATGTGACTATAATAATG
GGAATATTTCCTCGAAGATTTAAATTCTTCCAAAAATGAACTACttaagg
cgtacaaactttcgggaggccgaaaaatcgcgaaatttacaaCATAAACT
CTAGcaaattcaaggaaaaaaacatttttggtgaGCGTAAACTTTTTTTG
CGGATTAAGACACCTTTTCATGATTAGAAGTTTAACCGATTTTCTATTTT
gccaagaatttttcgcgaacataaactttcgcgaatggcactaacaagaa
tttttaaagatattgactttttgcgaaaaagagcaaaacatttctttcat
tAAACCAAAcgtttcaaccttttccaaaatgtttctgttcgcgaaagtAT
GTACGTCTAGGACTTATTACTACGAAGAATATTTTTAACGAGTGTCAATA
ACAAGGGACGAGAGGAAAAAGCGTTAAATAGTCTCTTAATTTATTTCTTG
TACAAAGTCATTTTTTTCGTAGGTCAAATATTGAATGTACGTTGCGCCAA
CATTCTAGGAAAAGCATGGACAATTTTTCAGAAACGAATGAACCCTCAAC
AGTACCCTTTCAATAAGAAGACATGGGCTCAATTTAAAACGGGTAAGGGA
ACGAATGAACGATTTTGTTGGGAAGTCTGTTACGAGTAAAATTTATAAAG
AACATTTCatacatttttaaactttttgattgCAATTTTCCTAATCATTT
TAATCGTGAACTTTAACGcaaaatttttagaatgttCAAATATGATTGAA
GTTTGCATCTGACgtcaaaagtgtttttccttTCATGGAAGGATGGACTA
GGTCGTGTGGTTTCTTCCTTATTTTATTGAACTAGTCTGATATGGTCGTC
GGAACGTCTGTTATATGAATCTAATATGATGATACAATTATCAACCCATG
GCGTCGCGGCGAGGTTTCGAGGAGAATAGCGGcaatgaatttacaaggaa
aattcttttgatgacaGTATCggaaacataaaaacaaagtttgaaaCTTT
TAAGTCCCAAATAAGTTGAAGACTCCCTAAGTTTATAAACTTGAATGCCG
TGTAAATTCGATTTATTGACGTTCGAACTGCAGTTGACGCTCTACGATCC
GTTACACTccattatttgataatattgaaagtgaCCGTCAACGACGTTcc
actattcgataggctcccttattcgatgaaaatccaatcccccttgaaaa
tcgaattagagagcgtcaactgtataacATTATAGTAAGAAAGCAGCATT
TTTATTGCGTTTAGGATTTTCTGACAGTGTTGGAGATTTCTATCTCGGTA
ACCGATGGATGAACAACATGTTGGGTGGAGGGAAAGTCAACAGGCTGATG
GTTTTGGTTCGTAAAGGAACAGAATGGTCGGGTAGGAAGTTTTACGAACT
TTTCTATTATATACCAGGTGCACCacaaaaaaagttaacaaaTTTAACAT
TAGATTTTATAGATTTCTATGAGGTCGTTTATGTGCACTCTCTGAAAGGA
ACTTGTTTGTTCATCGAAGCATAACACAAATTCTATAAATGACACATCAA
AATGTCAGTTAAAAGTTGAGAAagcgaaattcaattttttaaacttttca
tgGTTAACGCTGTTGACGTTATAAACATTAAGAAATAGACTTGCCATTGt
aatttttataacaacaaaaCATCACTCATGAAAaggtttttaatttgatt
tgaagCTTGGAAAATCTAAAGACCAACCAGCagtattttcatttattttt
ggcttttcgttttctttcaacCGATGTCAATTGAATATGTTTCAAAATTA
ACCAATGCCATATCCAACTTTTAAATAAGGGTGATTGAAATTAATCTGGT
TGATTATAACAAAAACCATCCGTACGAGGAGAtatgtcattttttaatga
tttctatattttgacttttgacccccAAAAATATTGTGTAAAGGCTTGTA
TATAAAAGGGCGGATAAGGTTTATAGTAAtctctccctaattcgaacccg
ctgtaattcgaatctttctataattcgaactaaaacattggtccCCTTAG
TTGGAAAGTGGTATAAAaacgctctttaattcgaagaTCGAATTAGGGAG
TGGCAACAgtatatctttttcatttctttcaggTGAGAAGTATGAAAAAT
TCAAGACGAAAGGTGACAAATACAACTACGAAGCCGTGATCAGTGACCCT
GCAAAACCGCAAGATTCCATTGCAGGGTGGCTTAGTCTCCACTTAAACGA
GCAAAGAGAATTTATTACTATTGATCGTGATCCTGCAGATGTCGAATGTT
CAAAGTTGGGGTTCAATGGTGAAGGGTACGCTGGATGGAGAGGGAAACAC
CCTGATGCGTGTCTTGGTGAATATTGGTTGTTTCCAAACGCGCGTGTTCC
TCAAAGATTCTTACCGAACAGGGTTCTTGAGAAGTTTGATGCCAGTATTA
TGATGTTCCATCATGCAGAGGACTGATTTTAATTTCACTTTAACTTTGGT
ACAGTCTTGAAGTTGCTCaggaaaaatttcaaagattggatttcatattt
ttctcgTTCAACTTCtctgcagtcttgaagtagctcaagaaatattttga
gatctagatttcttttttttttcgttcaacttttgtgcagtcttgaagta
gctcaaaaAGATTCCTTAATTCACGGAACCTTTACAATTTATCTGGTAAT
TCCGATGGTggttggcggccgcccacgcttaAGCTCTAAAAGAGCGGTCC
AATTTCCTATTGGAGAGAGATGATAGTTGGCCTTTCAAGTGCCGCATCCC
CCGTCGGGTTCAACTACCTTTGCGCGCAAACCTAAAGTATTCCGGTTGAA
CCTACCAAATGCTAAAAGCGAGGACTGGGTTACCAGggctcccgctgcaa
aatccttgacgcggtcttgcGAAATTCGGTAATCTAAACCTACCAGATGT
TTAAAATGCCCAtgagagctttagcgtgtcggatgaaaatttcttcattt
ggGTGCCAGAGAACTTTTTCATGTTTGTTTGAACGCACGAGTACATCAAA
GTAATTTCCGAGTAGATTCTGATACTTTGCGCATGACACGTATTTATGCT
CTAAAGGTCATTGCTCCGTAAGAGGTTGGGGCATCGCTTTTATCTTTTTC
ATCCATAtttgggatgaatattaaatgagatTTGAAGTGCGGTGATTTGC
AAAATTGAAACAATCGCACCAAAATAAAGTGCCTATTAAAAACATAATAA
TAAGAACGCggtcactttcactttcattttaaagcaaaaCGCAACGcgtt
tttgattgaatttgttGAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025455TCONS_00025455Clytia hemisphaericatranscript
TCONS_00025456TCONS_00025456Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025456-proteinTCONS_00025456-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000536supercontigsc0000536:23142..27161 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29	0.46	0.85	1.17	1.72	1.76	0.84	0.92	0.45	0.64	0.27	0.38	0.42	0.32	0.11	0.26	0.31	0.39	0.37	0.96	0.5	0.68	1.6	4.08	3.2	5.95	0.8	0.68	0.3	0.32