XLOC_014081 (gene) - C. hemisphaerica

Overview
NameXLOC_014081
Unique NameXLOC_014081
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000517:188612..192088-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014081 ID=XLOC_014081|Name=XLOC_014081|organism=Clytia hemisphaerica|type=gene|length=3477bp|location=Sequence derived from alignment at sc0000517:188612..192088- (Clytia hemisphaerica)
CAAAACTTCATGAATTATTTTAACAAAGAATGAACAAATTCAGATTGAAA
GACTGTGTAAAATAATTTTCACAAAAGTTTTGAAGTTAAGTGTCTTGTTA
TGAGGTTCATAGTTTGGTAACAGAACAGTGTTTGTGTTAGTTTGTTTACA
TGGTGAGTTTAGAAGTTGAAAGTGTTTAGTGGACGAAGCAAAGCAGCATG
ATTATCAAATTCAGAGGTATTTTTTACTCATCTTCATTTTCTTGAAAACA
TTTTTATACTTTTTTTATCTTCTTATGAAGAAATTTCGATCTGGATGACT
TGATATTAAACAAGATGCAAATTTCTGTTCGTGGCACAAGTAAGTTAAGC
TCCTCTAAAAACACATTTTGTTTGTTTGAAATGTGAGAAGTGTAATTTTT
GCTTTTTTTTCAACCCTTATGACCTCTTCCTAATTACTCAAATTACATTT
CGTGGCTTTTTCAATCCTTAGTTCGACTTCGATATGATTAAAATAAGACA
TACCTTCAAAGGTAGGAGGGTGGCCTAGATAGTGTTTAATTTGTTTAGGT
AACCCGTCTACAAATCCATCCATCCCAATCCATTTCAATAAGAGATACAG
TGTAGTCTCCATAACTCGAGCCAGCACGGGGAACACAAATTTGTTCGTGT
GATGGAATGGAACAATTTCGAGTCATGGAGACTGGTTTATAAGGTGTTGG
TAACTGAAGGGACAAGAAAAACGGTTCGAATTAAGGAGAATATCGATTAA
TAGAGGTCCGAGTTCTGGGGACTCTAGTGTGTTAATAAAATGATGTTTTT
TTCTTTCATAGGACCAAGTTTTGTCTTCCTCCCAATCCTATCAGTGTGTT
TTATCATACTCTACTTACGAACAAACTATCAAGTGACAATCTCAAGCATA
GATGAAGGATTCTCATTCCAAAACTATAAAGCAAAACGACAAATTGAAGT
AGCAGAAAATGAAAAACACGACAAATGGATTGTCATCACTTCTATCAACC
CTCCAACAGAAGATGTCAAGAAATTGGCAAAAATCCCTGGATGGAAAGTG
GTCATGGTTGGTGACACCAAATCACCAAAAGACTGGAGGTAGGTTGATAC
TCTCATGAATTGCAACACCTGTATTACACCCCTGTCTAGCAGCCCCGCTA
AAATGTTGTTTCTGACCCTTGTTACACAGTACGGAGCAGTCCATTTCACT
CTACGGTGCTGAAATGGAAGTCGTATTCAGATTATAGAAATAAAAGCCCC
TTATCTTGTTTTTTTTTACAGTTATCCTAACGTCATTTTCCTGGATATTG
AAAAACAGAAACAGCTCGGTTACAAATGCCATTCTTTGTTGAAGTACAGA
GCGTACACGCGTAAAAATATCGGTTATTTATACGCAATCCAACATGGCGC
ACAAGTCATCTATGAAACAGACGACGACAATAGTCCAACTAACGGACAAA
TCGAATTCGACCAATCACTGACTCGAGATTACTACGTTTACGATACAGGC
TCACAAACACATGTGGTTAATCCTTACGCTCATTTTGGTCAAAAATCGAT
ATGGCCAAGAGGTTATCCATTGGATAAGATCAGCCAGGAATCACCAAAGA
CATTCAGAAAATGTCATGGACGAGCAAGCATACAACAGGGAGTTGTAGAT
GGTGACCCAGATGTAGATGCCATTTTCAGACTGACCAGAAAAGACACCGG
CGTTGATTTACGAGTCACTTTCGATAAGGAGGCACCACCAGTGCTTTTAC
CCAGAGGTCTCATGGCACCTTATAATACACAGAACACGTTACACTTATAT
GATGCTTTTTGGGGGTTATTAATTCCTCAGACTGTTGCATTTCGTGTGTG
TGATATATGGCGTGGTTATTGGGCACAACGTTTGATGTGGGAAGTGGATC
GATATCTTTCCTTCTTCCCTCCCAATGCAGTGCAAATTAGAAACTCACAT
AGTTACTTAGATGATTTTATAGACGAACGTGAGCTGTATCACCAGTCTAG
TGGTCTAGTTGAGTTTCTGATCAACTGGCAATCCAAACAAACAAACTTTC
TTGATACTATATTACAATTATCAAGAGATATGGTTAAGAAGGACTTTTGG
AGACCTGATGACGCTCTGTTAGTTCAATACTGGTTGGAGGATTTACTATC
TGTTGGCTATAAACCACCAACATTGAAAAGTGGTGAAGCTAAATGCACGT
CTGATCAGATCACTTTCACCTCACAAGACCAACCTTCGTCGTATCTTGGT
CTTGGGGTAACCAAGAAAATCATTTTCTAGACATTCTTTTTTGGTCATGG
AAATTTTCTAGTATGGAATTATTTATACAATGTGTCTTAAAAAACAGAGC
ATATTTTGTTTAGAGTAAATCGTAGNTTATCTATACAATGTGTCTAGAAA
AACAGGACATATTTTGTTTAGAGTAAATCCTAGGCTGTTGCAGCACCCAC
TAACGAATCCGTGTTCTTATACTATCTGCAGTTTTGTAGAGGTCTGTGGC
TCTAAATATCCATCATGATTTCTAACAAGCGCCGCAAGCTGCGGATAAAT
AATTGCTCTGTATTATCTAATATCATGACCTTAACTGAATTAATCTCGAT
GTGTTAGGTCCCTTCTCCCCTACTTTCATTTACACCCTGTGAATTCATTA
ATAGTGATAAATGTTAGTTTCTAGCTGCTGTCCATTATGCTCTTTTGTTG
TCAGATTCAAAGAATGTGATCGTGAGCGTGATCGTGTGAGTATGACCTGC
TTGAAAACGGGGCAAATTTTCAAAAAAATATTTTTAGACCAAAGACCAGT
TTATTTTGGATATCCCTATCACAAAAGGGGTTGACGGTACTAAGCTTTTT
TTCAAACATGCCATGAGGTGGAAAAATAACGATTTTAGCAATCTTTGCTA
TCGGCATTGACGATGACCCAAGAAAAATGAGTCTGGATTTTGGTGTTCCC
GACCCCTGTACACCGTACATAACGCTTGTCAATCAGGGTGTTAAGTCACT
TTTTGAGCATTTTTGCAATTTTCATGTAGCATCATAATAGAAATCGAGTT
TCAGAGCTTACGGTCTATTATATTCCATACGAACCAATAAATTATTTTTA
TCTATTACATTTTTCTAGACATTTAATTTATATGTTATACAATAGTCTCA
GGTGAAGAGCAGGTAAATTTCTCAATAAAGTTCTCAGGTAAATTTTGGAT
AATGAAATTTATCATGATTGTATTTATGCTTTATTTCAAGTATTACAAAT
TATATTTTTCACCCTGCCTTTCTTCCTTCCTTTAAGACAAAAATGTTGCC
TGAAAACTAAATGTTTTGATTGGGTGGGGTAACTAGGAAAGTGAAGGGTA
CGGTAATGTGGGGGTAATGTGCCGCACTTAAGATTGCCTTTTTTGGAACC
TGTAAAGGTTGCAAAAATCAGAACATTTGATTCCAGTCTCTAAAGGGTCG
GAAAAACGTAAAATTCCGACTTTTTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025049TCONS_00025049Clytia hemisphaericatranscript
TCONS_00025048TCONS_00025048Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Conserved uncharacterized proteinTCONS_00025048-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000517supercontigsc0000517:188612..192088 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.03	0.02	0.03	5.78	5.5	18.2	19.76	6.3	6.22	10.23	5.63	5.56	5	1.76	3.85	3.65	3.22	2.61	3.67	2.34	2.41	1.25	1.54	3.21	3.29	0.68	0.21	0.28	0.4