XLOC_013406 (gene) - C. hemisphaerica

Overview
NameXLOC_013406
Unique NameXLOC_013406
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000463:231589..234979-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013406 ID=XLOC_013406|Name=XLOC_013406|organism=Clytia hemisphaerica|type=gene|length=3391bp|location=Sequence derived from alignment at sc0000463:231589..234979- (Clytia hemisphaerica)
CTTAAAGTTGTAGGTAATAAAGAAAGATGAAATGGATTTTGCTGATTCAG
CTTTTTTTCGTGATCATTGTTCCACATGATTGTCTCGTGTCTGTTAAAAA
AACACTGACGCAGGAGAAAGAAGCATTTTTACGCCGTCAAGAAGAATGGG
TTGATAACTATCATCACTATTTTGTACCGTAAGTCATCTCAAAATTTCTC
TAGTGTGTAATACAGTAACATAGGTGTTATATGATAATGCGATAATTGTT
ACGGAATAATAAAAGTTTGTATAAATAATGTCATTCAGTTTATCTTATTT
TCATGCCCCGTTCTTTAGCTTCCTAAACTTCTTTCTCTCTAAACCCTATT
GGCATTTAGGGGCCACTCGCATATCGATGTTTCCCACGACTAATGTTTAC
AAATTGATGCAAGGGAGTGGGTGGAGGTCAGAGGCAGTGACGCTAAAAAA
ATCAATTAAAACGTCGATTTTCGGGGCTGATTGAATTCTAATTGGACTTA
GTATGTCATTTTGACGTTAGTCGTGGGANATTCTCTAGCTTCCTAAACTT
CTTTCTCTCTAAACCCTATTGGCATTTAGGGGCCACTCGCATATCGATGT
TTCCCACGACTAACGTTTACAAATTGATGCAAGGGAGTGGGTGGAGGTCA
GAGGCAGTGACGCTAAAAAAATCAATTAAAACGTCGATTTTCGGGGCTGA
TTGAATTCTAATTGGACTTAGTATGTCATTTTGACGTTAGTCGTGGGAAA
AATGGATATGCGAGTGACCTCTCAAGGGTACTATTTTTCATTTACTGTTA
AGTGTCGTACAATGTAGCCCCCTACAGAATCTTAGAATTCATTAATGAAC
CAAAAATATTTCTTTTTCGTTTTTCAGGAGCAAGTCTTATTATTGCAAAA
AACGTGTTTGGCGAGCCTGTACTAAAGGTAGGTTTTCAATTGCACCAACG
TCCATCAATAACATAAAAAGTGGTACAAGTGAGCCTGGGTACGAGATTGG
TTAGTTCAATTCGTTTATCACGATTTACAAAAGTTCGATACCTGCCCAGC
TGGCACACAACGTTGTTTTAACGTTTATCTAATGCTCAAAACGTCTCTAT
AACGTTAGATGAATGTTGAAACAACGTTGTGTACCAATTGGGATATCAAC
TCATGTTCAGACGTTGTGGTTCCGTATCGTTCGAAACGAAACGGTTCCGG
AACAAGTGTGAACGTCAAAATTGGAAACGTCAAAAAAGAAAACGTTACAA
AGCAAAAAGGTTGAAACAGTTTCGCTCCATTATTTTTTATCGGAACGGAA
CTGCTCCGTTTTCTTGCTCCTAAATGTTCCGAAACCAATATGAACACATT
CGATACGTAACGGAAATCATGTCGGAACGATACGAAACCGTAGTTTAAAT
ACGGTCTTATAGCAGTGCGGTCAGCTTTTGAAGAGACTGGTAACGAAAAC
ACAAGTGTAGAAGCGCATTTGTGAAAAATTAGCCTTTGAAGCATGATGGT
ACAAAAGACCAGTCTGTTTACCAATTCGTTTTTCAGTTTCCTATCTAGCT
AAAGGAAAGTGGACTGACCGCACTAACTTGGGTATAAAAATAACGAGTAC
TAAATTCATATTCAATTTGCTTACCGTTCTACAATTAAGAAGGAAGAATC
ACAGGTTTTCTTACAACGACATAGTGATAAATAAGTTATTTAGTCTTGCT
TTCTTAAAAAACCCTCAAAAAAGTGTCCATGTACTTTCAAAGACTTTAAT
TTTTTCTATTCAGTTTGAATTTCATTCCTTAGAATCATGCGGAGAGACCT
GTGCGGTTGGTCGATGTGTCGGATACAACCAATGCCAATACATCACACAT
AAACTGAAAGAAGCTACTCACACAGGTAATTAAAGATGAAAGCACCCGTT
TTCGTTGGGTTCAAAGATAATATTTTTGAAGTGGGAAAAACTAGAAGTGG
CCCGCGTGTTCATTTTGACTTAGCATAAAAGCTTTTTATATTTCGTTATA
ATGAATACTTTCAAAATGCTAGATCAAATCTCAATGTCTGGTTAACTCAG
CCAAAAACTCCAGTCGATGAAGTATGAGCTAACACTAGGACAAATTTCAT
CTAAGACAAACAAATGTGAAGACAGGAATTGTAGCTATTGTCTTATAATC
GATCACTTCTAACGTGATTTTTCTACAGTGATGAACGGCTTTAACCTTCC
GTATCATATCGTCCAATGTTTATCTTCAACCTTTCCAAAAACAAGAAAAA
GTGATGCCTTAAAATTTGCTCCGCATTTCGGATGACGAATTAAATCAAGT
TCTTTCTTTGTTAACGCTTTCTGATTTTTTCGAATTCTGGTAGTAAATGT
TACTTCCAATCAAGCGTTTGTAAAACCAAGCGGGCAGCACAATGTAGGCA
TCCGATCTGTATCAATTTTTACTCATTTTAGGGGTTATAAGTTTTGCCTA
TAACGTCAGTTTTTTGGCCAAAAAAACATTTGCCAGGCCTAGATGAAGGG
TCCCTCTCTCAAAAAAGTTTCAAAATCCTATCTACTTTTGAACCAATCAC
ATGCGGTTGCGCCCCCACTATTTATTTCTTGCATGGTTTTCACACAAATG
TTAGAAAATAAAATTTACCACCAATTTTCCAAAAACGTGCAACGCAAAAA
CAGCTCGTCGTATTTCTTGGTTTAGAAAGAACAAAGATTCAGTTCAAGCC
TTGGGTTTACATTTCGTCATTGAAGAGCTTCTTTTTTCCCTCAGGTAAAT
GCATCCATCAGATAGACCTATCTACACAACAACAAGCTGAAACATCGATC
AAAATGTACGGAACCGAAAATAAAAACCCATTCCTCAAAATACAAAATTG
TATTTGGAAAATCAAACTGAGTACTCGAAACAAAACGGAAATATCCTTCC
GACATTTCAACATGACAAGCGAGACGACATGCACACAAAGCATGATAGCG
CTTCGTAGCTTTGAAGATCGAAACATATTTTTCTATTGCAGTACCATTCA
GCCGGTAACCGAAAGAGCATTGATTGTTGATGAAAGCGAGGGTTTGATTT
TGGAAGTGAATCGCGGAGACTGGGAGCCGAGCGAAGGATTCGTTTTAAAA
CTGAAGTGAAGAAAGTTTAAAATTCGAACTACAAAACCATTCACTGCATT
TTCATCGTCGTGTCAATGGAGATAAAGTCAACGTTAAATACATGGATGAT
TTTTTTACAGGAATTTGTACATAAACTTTAAGACCAATTTAATTTTAGCT
AAAGTTCGGCAATTATTCTTAATTTTCAGCCTTGACAATAATTTAAGTTG
ATAAAGTTCCTTGAGTTAATTAAATTTGCGGGATAATGGTGAGGTGTATG
TTTGAGCCAAAACTAAAAAAAACAAACTAAAGAGAATTCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023859TCONS_00023859Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023859-proteinTCONS_00023859-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000463supercontigsc0000463:231589..234979 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.05	0	0	1.39	1.49	16.35	14.07	10.12	12.83	13.31	7.38	24.71	23.6	54.97	70.1	1.68	2.16	3.18	3.17	0.45	0.2	0.96	0.63	1.05	1.57	3.2	4.92	5.34	5.23