XLOC_013275 (gene) - C. hemisphaerica

Overview
NameXLOC_013275
Unique NameXLOC_013275
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000457:14268..18008-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013275 ID=XLOC_013275|Name=XLOC_013275|organism=Clytia hemisphaerica|type=gene|length=3741bp|location=Sequence derived from alignment at sc0000457:14268..18008- (Clytia hemisphaerica)
CCTTTTCAGCAAAATTCAGTCTCGCTAAGGGTCAGGGTTCGGAGGTCTGG
TTCGCACATACCCGACATCCCCAACCCTAGTACGGGGGGTACCGGGATTC
AAACGTAAAATTCTTATTCTAGGTACAAGATGGACACAGGAAATAGTATG
GTGCTTAAAAAACAACATGGACCTTGAAAAAGCCTTGTCTACAAATTTGA
ACGTCCGAATTCCAATGTTATGGTATGTTAAATTAATAAGATTTATACTC
TTAAGTTAAGTTTAAGTTTAGTTAACTTTATGCTCTTAAACATGAATATG
TTAGTTTTAATGTGGTACTTCTGAAAACCAATAGACCACTCAAAATAGCT
TTGGCGAATGGCGTTTTAAATCACCATGCTTAGACACCATAAAGTCGGCC
AGAGAGTAACCCACACTGAGGTTCTTCTCGACAAGGCAAATTAGATTTTG
ATGCGGTCCCAACTTGCGGTCTAAAATCCTCATTAGAAATTTTTGTTTTT
GTAGTGATGACTTCTTTGCTAACGACTACGTTGATCCACAAGTCAGCTCA
TTTGAATTTGTAAAGAGTATGGAAAGACCAAGAATTGTGCACACTCATCT
AATGTACGATATGTTACCGAGAGATTTACTAGAGAAAAAAATCAAGGTAT
GTTCGATTTGTTTATTTTTTAAAACACTACTGAAAATGTGACCCAGAAAA
ATGTTCTTAACCCGGGGGGTACTACCCTTGTCGACCGACGGGGGTGCTCC
GCTGAGATTCGAAAAATGGACCCTACGTGGGACTCGAAATTTGCGAAAAA
AGTAACCCTGAATGGGACTGAAATTCCAAAATTTTCTCAAATTTTCTACT
TTTTACCCAAATTTTCCAAAAATAGACACCCTACGAGGGACTGATTTTTC
TATTTTGGTGTTTTTGCGACCCTACCTGGGACTCGTGGAGGTTAAAAAAG
GTACCCTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCT
TAAGTATAACAAAAACCAGACAATTAGATCAGGCTGGGTAAAAGTCTTTG
ATATTGATATACATGATACTAAACTGTTAATCTCTTGGAGGAAGTAACGT
CAGATGCATTTTGACGCCAAAGAAAATTAGAGTCGTTCTGCATATAATTC
GACCTTTGTTTTTCGCGTTTGAAAACTTTTGCGGGAACTTAATTTTGTGG
TTTTGGGCCAATTTGGTAGATTAAAAATACTAGTATTGTTGCTTTTGCTT
TTGAGGGTGTGTGTTTTTAAGGGGTATCTACTGACTTGTATCGAATTGCT
TATCAAATTTTGTAGTTTCAGGGGTTTAGCCTGTGATATCAGCTTCTTCC
GGTTTTTCCAAGGTTTTATTCGTTGAAAAATATTTCTGATGGGCTACTAT
TTGAAAAAGAACAAAGGGGTGATTGCATCGTCTGTGACGAATCTTAAGAG
TTGGCCCATTTTACTCCCTGTATTAGGGCTGGAGAATCGGGTATAAGCAG
ACCGAAAACCGACACTTAGAGAGACTAAATTTTGGCGAAAAAGTGAACCT
TAGAGAGATAAAATTGGTGAAAAAGTGACCCTTAGAAACTGTTTTCAAAA
ATTTTCTTGACCTTAGTGAGACTTTCAAGTTTTCGTGCTTTTCGCATCCT
TAGAGACTGTGAAACGTGAAAAACCCGACCCTCAGAGAGAATATTTCGCC
TTTATGTTATTTTTGTAACCCTTAGAGAGACTTTGAAAGGTGAAAAAGCC
TACCTTTACCGTCCGCACGTTCCAGCACCTATTTTTGTCTAAGTACTCCC
ATGAGCTTTACCTTTTTAATTCTTACTGATTTCTACCTTTAGATGATCTA
CGTTATTCGAAATCCAAGAGATGTAATCATATCTTATCTCAACCATTTGC
GAATATTACATGGGTATGAAGGAGATTTGCAAACACTGCTTGATTTATTC
TTAAAAGATTTAGGACCGCATTGGGGTCCTTATTTCAAACATGTTTTAAG
TTATTGGAACAAGAAATCAGAGCTACCAAATTTGTTGATTACAAGGTATG
AAGAGATGCAAGCAGATTTACCAAAAGTTATTAAAAGAATTGCCAGCTTC
CTAGAAGTTACAATATCAGATGAAGATGTACTGAGATTGTGTGACCATGT
ATCTTTTGAAAAAATGAAAGCTAATCCTATGGTTAACAAGGACGAATATT
TTGAGGTAAGTTGATTTCGTTAATGCTTATTTTAGGAATCATATCGGGCT
TTTCCAGAAAGAAACTCTACAGCCCCTGTTTAGGAGTTCCAACCTTTTGT
GACCTACCCCATTAGAATTCCAACCGGATATACTGTAACCCCCCTTAAAT
TTCCAGTCCAAACCTTTCTGGGATTCCGGATTTTTACAGGAGTTGAAACA
CTACCTCAATGGAATTCTGCTTATTTTTTGACGGATTTTTGTAGACCCCT
ATGTGGAATTCTACCTCATTTCAAACCCTACCCCCTGTAACAGTGGAGAG
TGTAGTTTTTTCTAGAAAAGCCCACTTGGTCTAAAAGCAAATTCTGTTCC
CAAAAAAGCCGATCTCTTTCCCGTTCGGATACAAACGACCCCTGACCGCA
TAATCACGGTTGAAAAGGTTTAATTTCGAAACTAATCTCGCATAGTTGTA
GCCATTCCACAAATCTTCCATATACTTTTAGGAAAGGAAAAAAGCGATGA
ATAATGGTTATGCTGGCAAATTTATTAACAAAGGTAAAAGTGGAACGTGG
AAAGAATATCTAACCGATGAAATGGTTCAAAGATTTGAACAGTGGGAAGA
GAAATGGTTGAAAGATACTGATCTTAAATTTGTTTATGAAGTTTGAAGTG
TATTCAATCAATTTTTTTTTATTACAATGTTTGTGTAGGGATACCAAAAT
CCTTTATTTTTGAATCCGTCAATCTCGTACCCAGAGCCATCCACCAATTT
TTTTTATTTTACTGAAAAACGTGGATATAGTTTAGCACTGCGCTGTATCA
ATATTAGGGCGGTGTGCATTTTTGAAAGACTTGGGCAGGTTATTTTCGGT
GCCCAAGAAGGGCTGTGGCATGAAGTATTCGAAATAAAAGTGAAAGTGAA
AAAAGTCAAGACCTTTTTTTTTCGAGTGATTTACCCCTCGCGATAAACTT
TAATATATTATTATTAGCAGGGTGATTTGCGCGAAATTGTTACGAAAGTG
TGAAAAAATTGTCAAAAAACTTTTTTTCAAAATTTAAACTTCTTTTAGTG
TTTTTGTAAGATAGGGGCCCAGTTTTTTCACTTACAGCCAGTTCTTTCAC
AGTCTATGCGAAGAGTCAGTGAATGCATTTTTTGCACTTGAGTAGCAAAA
ATCTGCACAATTTCAACCTCAATAATTTTCATTGTGGCAACAAACTTTCA
AAATATTTGGGATTTTGGGAAGCAATCTAGTCTAGATTATCCAACCAATG
TAATAAAAAATTGGTGGAAACAAGATTTTTTGTGAACTTTAAGACTTTTT
CAAATTTTGTCGCGTACGGGACAAGAAAAATTTCAGTTTTGTCCCGTACG
CGACAGACAAATCAAAAAAATAATTTGAAAAAGCTAAACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023633TCONS_00023633Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023633-proteinTCONS_00023633-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000457supercontigsc0000457:14268..18008 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
248.43	244.47	198.43	192	10.91	8.66	33.75	20.68	8.08	22.26	19.83	5.25	0.05	0.02	0.02	0.1	34.33	49.97	0	0	114.61	102.17	107.63	96.46	2.28	1.05	5.23	5.29	35.17	46.4