XLOC_013204 (gene) - C. hemisphaerica

Overview
NameXLOC_013204
Unique NameXLOC_013204
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000455:10592..18329+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013204 ID=XLOC_013204|Name=XLOC_013204|organism=Clytia hemisphaerica|type=gene|length=7738bp|location=Sequence derived from alignment at sc0000455:10592..18329+ (Clytia hemisphaerica)
GTTTGTATATAGCAAGGAATGGCTCTATAGTGTTTGTTATGGATTCAGAG
TCACTATTggattgattttttgaagaatggAAAATTTAAGTCCCCTTGCT
GAGAACCAGGTTTGTAGAGTACTTTTGGCTTGTAAATTATATACGTATAC
AGATATGATTTCCTAGAAATTACTTAGCTTTAGGTcttacattttttata
ttttatatgttttgaattctaaagttttttaataagtttttttttaaata
agatatATCGTTTTatatatcgtttgcttactcatcaattttaatttaca
agcttttcacattggattgacccggatgtggagcaagattatcagaaaga
agaaaagaaaaacattttttttgtttagctctatcagcataatataacga
TAGGCAGaaactgtcctgatatgaaatatgtgtttgatatgaaacgggaa
cacttatgtaaaaataaaacctttaaagtttcCATTATTATGTTCACGTA
TAAGTAAATGTGGCCTCGCCTAAGAAGAATTtatggcgtgatggcgtgat
ggcgtgatcggGCGATCCGCTGGGGGTGGGATGGGAGCTCTGTAACCCTA
CCACTCAAAATGTAGACTGTACGCTTCCCCTttgatgttttgatataggC
GATCGATGAGTATCATGTATAAAATTCCTATCCGAGAGTTACCTTGAATT
TGAGGTaacttgttttaattttcttaaaaaggtttAGAAATTCAATGATT
GAAATATCATAAAACTTACTCATCAAACTAATAAGTACTTACAAAGACGG
ACGGTAATTGTccgacgggaattttatacataATAGGCATCccctagacg
atgttatcgtccgtcaAGATCAGCGTTCGAGAAAATACGGTGCGGAGGTT
AAAGCCGTTTATGGCTGTTGAGGAAAAATGCTGCAGAAGTGATGATGAAT
TATACATTTTAGATGCAGATGCATTAGACATTGGGTCCCTCCGAAATTTT
ACCCGCCTGTGCGGGAAAAATTCTCGCCCGACTTGTTACTTCCCGCGTGG
CTACTTTTCTTTTCTGTTGTACGATTTCGTCTAGACATCTCTTataccaa
aacaaatcaaaggGGATCCGTGAAGTCAACTCTAACTAAATGTCATATCT
ACCACATTTCCAATGTCCAAGTCTTCTACAATAACCCcctattatttatt
attattttttcaactttattAGGTTATCGACCTGAAGAAATCAGTTTGCA
CACTGAAAAGTAAATTAAGTGAGCAACCGAACGAATTTGATACCCACTGC
ACCACAAGCAGTGTTGAAGTTGAAGTGGAGAAGCAACTTGGTGTGGAAAA
CAATAATGACCCTAAAATCGTCTTTTCAGACGAAAATTTTAGTCTGACGT
ACAACTGTCATAGTTTCAATATATATGTATGCTGCGCACTGTCATTTTTG
TGGGTTTTTGGAACAATTGttccaaaagaaattcaaaatgttctGTAAGT
CTATGTgtctattcttttttttttaagtttcaaatCAGTAAAGCACACTA
AAGGCCTACATTGGAACAATGTCTTATCATTTGCCTACCTACTTAGGTTT
TTAAGTCAAAAGAAACCGTTTTGTATGTCTCTGTTTGAATTGATTGAGAT
GTCGAATCGTAATTCTATCTTTGCAAAATGATCTCTAACTAAATAGTTGA
TATACGCCTTCAATTTCCTGTAGGTACCCACCACAAAAGACTTGGTACAC
GACaatacaaatttttttcaatggacCACCCAAAGTAAACGCCCAGAATG
TTTGGCATGAACTTTACGCTTTATGGGCGTTTAACGCCCTTTATTTCCTC
GTTGGCTTTGGTTTTGCTCGTTACAAATCAAGGTaagtaaatttttcatt
aatcaTGAGATTATTAGACTTCAAGGTTTAACTTATTGATCCTCCTTACA
GCCTTAATGGCAGTATACGAacaaaaatcggcgggagagttttgTTGTAC
CCTTTACCACCCCGCTCCCACGGGCGTTTTTTATGTTTTGCAGAGACGTT
CAGAATTTTGCATAAAATGTTCTGAGACACGGAATGTTGTCTAACCATAA
CAAACCGAACTTCGCGTTATCTTTTCGGTCAGCGAAGAAGAGTCTGGTAC
ATGCTAGTTTAGCTGAAGAATGGAAAATTCTACCAGCTGTATACTCTGTT
CGGCAAATGACCCTGCTTGCGAGTTTTCTACGACTTTGGGCTTTCTTAGT
TACTAATTTGTCTTTATaaactatagcatagtctattGTAAGGGCAGCTT
TAATATCTCTCACAGATAAATGATTAGACTTATGTCATATTTATTTTCAC
TCTATAGCTATGATCGCCGAGAAAATAGAAAGAATGAGTTCATCGATCGA
AAGAAGAAGGTGAAGAATCTGGTCATTGTCTTAAGTACCGTTGCTATTTC
TTCAGCGACCGTATATATGTACCGATCATACCGGTAAGTAAATAGTACCT
CAAGGGAAAAACCTTTGTTAGTAAAAACTTTTGTTGATAGGAAGAAGTTT
TctttcttgaaaacaaaagaaaacattccCACCAATTCTAGAAGTGGGGG
GGGCGGTATATTGAACtcttttgaaccaatcagattgcagatttTTCTTT
TGGGTTGCCGATAAAGTAATATTTCCCTCGTTTCAGATTTTCCGTATACC
CGGGAAAAATCCTTGGAActatatttctcatattgtactcacaacggtcc
gataactattacctatttatatgataaaaaattcaaatttgatcgTGAGG
GAGACGTACTTGACCTCTTAAGCTCCCGAGGCATCTAACTGTTGATCTCA
AAAGAGAATTCGTTATTCCATTTTCCATTATTCCATAGGTTTGCAGATTT
ACGTGCATTCTTTACGCGTGCACCACCATCACCACCACCAGTACCAGTTG
GTTTCTTCAGGGAATTCCTTGTCAATTATTTGTGCCAAATGGTGATGTTG
GTTGGCTTGCCTATTGCGCTTGGAGTTTTGGCACaaagagaaaattttaa
agGACCAAAGAAACGTTATGTTGCAGCTTTTGGTGGATTTGTTGTCATTT
GTTTGGCAATCTGCTATTTTACTGGATATAATTTTAAACTATTTGGGTAA
GTTTCTTACAAcctataatatttcaaatttgaaaataattgacaCTTTAT
CCTTTATCCTAGGTACAAAGAAAGTGCTCATATTGAAAATACCAACCTAA
AGtatggctgtcggcggagccagGAGTGAGGGAgttctatccccttttct
atttgcgctaaaCCCCAAGGGgagggggggcactcatatgatctggccta
cgtcatgtgccgcgcttaagggtaggttttttagCATCCcaaaatacact
gtaagggtgtgtttctgtggtattgcactgtaagggtcgaattTTACAAT
ATTGTTAACCGGTTTTCAGCCAATATTAAATGATAACACTTGCTTGACTG
CAGATAAGTTAAAAATAATATTCTGTTATTTCCGTAACTTTCTTTCGCAG
CAAGGCTTAactttaaaattaaatatttacccgttttatttgagaaaaat
ttgagaaacataatgcactataagggttaggcaaatcaagaaaaaatgca
ctgaaagggtaccttttcaacCATCtcaaactgcactgtaaggttgCGAT
TTTGAAAGGTAgtttttgcgcggcacataccgttgtttcaaaatcgagtg
ccccctccCCCACGGGCGCTAAACTTGGGAGATCCAATGCTGAGGTGGAG
GGCCACACTTACTCTCAGTAACTTACCACCTAGATCTGACTAACTGACCT
AAGCTATTCTccctgagttggcggtgaccgtgGATCCAGGTCACAACCCT
CAGactgtaaggcgaatgctctatcGACTGAGCTACTTGACCCGTACCAA
CCTATTAAGTTAAAAACCTTTAGCATGGTTAAAAGGTGGTCTTAGGTAAG
GGTGGGATCTAACAAATCGAACGCAAATAAATCAAATGTAATTCTTCAAA
TAATTAAACTCAACTCTGCAATATTTCTAAATTAtcaatcattttcttat
ttttagatCTGAGAATATTACTCCATTGGAGTCAACAAAGAGCTCacaag
actttcaaaaaatggatattttgaaagactttgtTCTGTATAGTTTGATT
GGATCGATCGTTATAATGTCTGCCATCTGCTTTGCAAAGGCTGTAATGGT
ATTTGGGAAAaggatttcattgaaaaatccAATGCAAAACACCTACCAGA
AAATTAAGATTACTATACAAGCGTTATATAAAACGTTCAAGTTCTTCAAT
GATGAGCTTATGGAAAAATACGAAGGAAACATCAACCATAAAGTTTTCTT
TGCATTGAGATTCATGTTGAGGGTGACTGTGTTTGTAAGGATTTTGAAAG
ACAATGGTCAAAGGTTCTACAAACGAGGATCATTGATGATCATGGGCTTT
GTTGAAACCGTCGTAACTTATGGAAAAACGATTTACGAAAGATACTTGCA
AacgttttctttaaaaagaatgttGTTGGCCATTACTATTGTTGTAATCG
CTGTTATGGCATCTGGATGGTACTTTAACGATGCTGTTGAAACGCCCGTG
TAAGTAGACCTTTGTCATCTTAACTGCCTAGCTCCTctggttgatttttt
tctgattgaAAGACTAAAAACCGATCATAGAAAGGGCCGTCCGCATAGTA
CGTACGCtgtaaaatatcgaaaatcgaGTAACCCCTTCTcgcctgtacgc
aagcgtacgcaaatggctattaTACCCCCctctggtaagtacgtactttt
tcattcaaaccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaagtacgtactttttcattcaaccccccccccctcggttga
agaaaatttcgaattcaaatcgtttgttCGGACCTTTAtctcatacatga
aactcaatgtttatcaagaaactttttcttttccttgatgcgtataacaa
ACGTAAAAGTCGACAAAGAAACAAGcgaaaaagggctatgaaaaaacttt
ctttgcgtacgtacatttttcttttacccctcccctccccctgtacgcaa
gtaTACGCTTTTAAGAAgacccccccctccccccttagtgcgtacgtact
atgtggacggcccctaaaaGAATCCAATAATACAATAGAGTTTCGATAAC
TCGAACGGAAACGGGAGGATTAGGAAATCGTTCGCGTTAAGGACACATTC
GAGTTATTGAAACTCAActgtgttttttctttttcctcgtTTTATTCGTA
CTTTCAtatgtatttttgtttttactttatcttCATAGTTTACCACCAAC
ACCTTCAATACCATCACCCCCAGAAACTCTCTCGCTCTCCCCAGAACAGG
AGATTTTATTTATGGTTGCCTTACCATCGTCCTGTCTTCTCGTGTTGTTG
ATGTTTACAATTTACACAGAAATGATTGTACCAATCATGACATATCACCA
TAAAATTTCAATATCACTTTACacaaaattcatcattgataaGTTTCTTG
acgaatataaaaaaataatcaaccGCAAAGTTGCATTTGcattgaaaaac
attttgaggGTGACCGTCATCATGAGGATTTTGAAAGACAATGGTCAAAG
ATTCTACAAGCGAGGATCTTCGATGATCATGGGCTTCGTTGAAACCGTCG
TAACTTATGGAAAACCGATCTACGAAAGATTCTTGCAAacgttttcttta
aaaagaatgttGTTGGCCGTTACAATTGTTGCTATGGCTGTTATTGCATC
TGGATGGTATTTTAACGATGCTGTTGAAATGGATGTGTAAGTAGATTTTT
ATCGCTTTATCCCTCTAGCTCCACGTTGATATTTTTCTGATTGGAAGGTC
GGCCTAAAAGAGGGTTGAAAAAAAACCATTACTGTAtatgaaagatttca
aaaatacagTAAACTGGTTCTAGTTAAGGAGAcattacagtatgtggccc
ccaaaacggcgatcaaatttgaagtttctctcaaatctagaggaaaagag
attttacaaaaatttttgctgcatgaaaacctttNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcgtttaattctg
ataaatctacaagtcagaatcttcatttcaatgaaaacctccgttttggg
ggccgtctccgttttgggggccatatactgtaagtAATTTAAGCTCTACT
GAGCTTCTTCTTTTCACCTTGCTCTTCTCTtctactctaaggtcccgaat
aatagggggtctgaataaaagggggcgtccgaaatttttgcaaaatataa
taaacgggagggtctgaataaacggggggggggcctGAAAATCATCATCA
TTTGACACGTATTTGACCTTGTTTGCAGTACTCTAAGGTCGTTCGAAATA
GATTAAGCCTGATTTACACTtcaactcaaaaacaaaaaaacttgaaaatt
aataaacgggggggtcctaataagaacggggggttcgaaaaattttcgaa
aattaataagcgggtggggacgtctattcgggactTTAGAGTATCAATGC
TttcatttgtatttttgatattttttttatttccatagTTTACGAGAAGC
CCAGTCAACACATTCAACACCATCTCAACCCGGAACTCTCTCGCTCTCCC
CGGAGCAGGAAATTTTATTTATGGTTGCGTTACCATCGTCCTGTCTTCTC
GTGTTGTTGATATTCACAATTTACACAGAAATGATTGTCCCAATGATGAC
ATGTCGCAGATGAATTCTCCTGTTTTATGCATATTATAAATTCTTTAAAT
TAGACTTTAAACTTTAggaaatttaaattaaatttttttttcaaatatcg
aaacattattataaagaaatataaaaatctCCCCAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023487TCONS_00023487Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023487-proteinTCONS_00023487-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000455supercontigsc0000455:10592..18329 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.02	0.02	0.02	0	0	0	0.03	0.05	0.14	0.01	0	0	0	0	0	0.01	0	0.06	0.02	0	0	0.04	0.02	0.03	0	0	0	0