XLOC_012919 (gene) - C. hemisphaerica

Overview
NameXLOC_012919
Unique NameXLOC_012919
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000438:159320..163585+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012919 ID=XLOC_012919|Name=XLOC_012919|organism=Clytia hemisphaerica|type=gene|length=4266bp|location=Sequence derived from alignment at sc0000438:159320..163585+ (Clytia hemisphaerica)
ttttgaaaaactgaaaGAAGGTCAAGAAAGGTTACTTTTCAATTACATTA
GTGGCCATGATTGTGTTGGTGTGCTCCCTACTAATTatggaaaatctttg
attttccaTCTTGTTCCTGCTGTCTTCAAATACTTTCATCCACAGGAAGA
AGCTCCTATTTTGATTGTAATTTTCCCAATTACTGCTTTGGTTGAAGACC
AAATTAAAAGGTGTACAGAGCTAGGTGTAAAGGCTATTTATCTGACCAAG
GGAAATATCGGAGAAGCTGCATGTGGAAATTTTGACTTATTGTGTTCAAG
TCCAGAATCCTTGCTCGAGGAGAGATGCCGTGAAACTCTCCTCGCTCTTT
CTCCAAGAGTAGTTGGAGTTGTTATCGATGAAGTTCATGTTGTCGTTAAA
TGGCGAGACCTTTATTATGCAGAAAGTTTCAAATATATTACTGAACAGAC
CTTTTATCAATAAAGCAAAGGATGACGTATTTTGAATCGACTGATTAGTC
CAATtatagaaaaataatgaaacagccatgcataattactacATTGTGCA
TGTGTTAATATTCAAATATGTATATATGGCTGTGTCATTGTTTTTCTATA
ATTGGACTAATCAGTTTATTCAAAATAACGTCATCCTTCTTGCTGTTGAT
AAAATCATATCATACCGTGTTCTGAGATAAATATGAAAACTTTTGATCCC
AAAGTAAATTTTTTGGAACACATCAAATTTCATTGCTTTTCATTTCCATT
GCCCCCGAAAGTATCTAAGAATTCCTGTTGTTTGGAAATGATAAAAATTG
taacactttttataaaacaaaaatacaagCATGTGACATacattttaatc
aaaagatcACCATTCAATGAATGATATCAGCCATTATTTATGATTTAAAG
CTATTCAAGGTAAAGTTTGTATGATAAATAAATATACAGtacacaaaaaa
atacaaaatctataaataaaacttgataaaaaaatacaaacaataGAATG
CAATTTGGATAATAAGTTAGTAAAACAGTCTATAACAAAAGtatataaac
aaacaaacagtatAACATATTTTTGTACAATGCCATACCGGCAGAGAAAA
ATTATAGGAAATATAAACATCTGGGGAGAAGCAAGCAACTTTATGATTGG
CTTTCAGGTAAAAATGTAGGTGCCATAATTAAAACATAGGTGACAACAAC
ATTACAACGTCTCACGATAGTTACTATTTTGAGGGAAAACAAACTATCAG
GACACTATCAGGACTTTACTGAAGCATTTAAAGCATTATCAAAAAATCTA
TTCCTTGCCCNCCCGCCATAATGGGCGATCCATTGCAATAACAGTCCAAT
CGAGTAAATCGATTTTCTTTAAGAGTTGTTTACAGTTGTCTTTGTATCTC
AATTTTGGTTGTCCAATAGAACGTGAACCATGTTCAAGCTCtccaaacaa
aatcatttttgctgCTCTAACATTTTGCATTCTCCCAATGTGACCAAGCC
ATCTCAAACGACTTTTTGGATAATTTGGATAAAAAGTTAGTAAAACAGTC
Tatgttagcctggatatccaagctcaaaagttttacctcagccagacaaa
gttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNccagcagtgataaatcaatttagaatggcagccttgaccataaa
atatagacagtgtggtggaaagtctgtttagacaaaaagtgcaaagtgaa
ttttgaagaaatttttttttttcaaaatccaacccaaaacagcaatacaa
aattggcaaacagaaaagaagaattgaagcaaaataaagatatacctttt
cAGTTCTTTccacgatgcaaccaagtcattataaagattaaaacataaat
atctaagcaagtgaaattgaaaagaaaacaaccagaacatctaaaaattc
ccatgttttgatcttcccgcttcttccctaccattattgttatttttatt
tggatgcgtggtcaaacacccaagggagacaattagatattctattgtta
tttgcttcgaagaagaaaagtcagggagatatgcaaagcagcgtatgcgc
cttgctgatcgtccgcgcggtccacctaaatatttaggcgaacacttcaa
gtcggctcgcataatttcttatacgcgcgcCACCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNcctcagatgagaatgcagacgatctaggtaaaccagaccgtaaaca
taagaaatatcaaaatcaaaaaaaagtttacgggctggatatccaggcta
agtcTATGTCTATAACAAAAGtatataaacaaacaaacagtatAACATAT
TTTTGTAGAATGCCATACCGGCAGAGAAAAATTATAGGAAATATAAACAT
CCGGGGAGAAGCAAGCAACTTTATGATTGGCTTTCAGGTAAAAATGTAGG
TGCCAGAATTAAAACAGAGGTGACAACAACATTACAACGTCGCACGATAG
TTACTATTTTGAGGGAGAACAAACTATCAGGACTTTACTGAAGCATTAAA
GCATTATCAAAAATTGTATTCCTTGCCCTGACTAACTAACTTGGAACAGC
AGAACATGGATTCGATTATGAGCAGAGTTGAAATGAATATTGagatttgt
ttattttattctaCCAATTTCAGGGGCCTGTCTTCCACCCAGAAAAGCGC
ATTTCGAAGTTGGAAATTTGAGAGCGTTCTTCAACAAACCATTCTTGTGC
CTGACTGCCAACGCAAACAgcaaaacaacaagaaaaattgTAAAGTTGGT
CAAACTCAGGAATTACAAGGTTGAAAGATTCTCTCCTGAGAACCAAATGT
AAAGATTCACgtgcaaaaattgaaaacaactTCAGACTTTTCTGAGGTCA
TGGTGTACATGAGACCTATTCTTTCTGAATTTGATTTGAATGGCCAATGT
GAAAAAACCATCATATACTGTCATAATATTGGTCGCTGTGGTAAGCTCTT
CTTGTTGTTCGATCCAAAGTATCGTGGTAAAACTGTCCGGGTGTTTCATG
GAAAGACTCTACCCCACCACAGGGCAGAGATCATGGAGGAGTTCATCAAA
CCATAAGGTGGTGAATGTTTTATTATTATTGCAACAGCTGCTCTGGGGAT
GGGGGTTAACATAAAGAACATCAGGCATGTTATTCATGTAGGGTTGCCAA
AGGACGTTGAAGGATACATACAAGAGATTGGTAGAGCTGACAGAGATGGT
AAACAGAGCTCGGCAATGTTATTTTATCGTCCTGCTTGTGACATTTCTCA
CTGCAAAGATGATGATTTGGTTAGggtaataaaaaacaaagaagatGTTT
GCAGAAGATTTGCCCTTTTGAAATGTTTCAACGTTGTGCCAGATAATTCA
CTAGAAAAACATGAATGTTGTGACATTTGTGATAAATTATGTGTTTGTGA
AACGTGCTCAGTAACAGTAGCTTTTGAACAAGTTACCAATGAACTACCTG
AACCTTTACCAATTATAAGATCAACcagtgaaaaagaaaagaaagtggTG
TTGGAGTGTCTAAAACAACTTAGATTGAGTAAAGCGGGTGAAAAGCTGGT
GATGGAGAATGTCGATTGTATCAAAACAGAAGGAGATGTAATAAGTTTGG
GTATTGAAGAATCTGTCATTGTCTTTGTTAGGAGGATCTTTGAAGAAGTT
TTTGATTGGGAAAACATAATAGACAATAAAAATGATGACAATGATGACGA
TAATGCTAAATCAACAGAGATTGGAACTGAAGACAAGACAGATTTTTGTG
ATAATGCTCAATTGGCAGAGGCTAGTGACTCTGATTTACTATCCTTGAAT
CAGCCATACGAGAAAgccaaagaaaattatttttatttcgattcgGATAA
TGACTTCTGGCAAGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022992TCONS_00022992Clytia hemisphaericatranscript
TCONS_00022993TCONS_00022993Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022992-proteinTCONS_00022992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000438supercontigsc0000438:159320..163585 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35	0.14	0.2	0.3	5.2	3.84	1.59	2.29	0.56	0.85	0.5	0.78	0.49	0.89	0.46	1.16	0.76	1.54	0.72	0.72	0.62	0.66	0.51	0.59	2.02	1.97	0.68	0.4	0.55	0.28