XLOC_012826 (gene) - C. hemisphaerica

Overview
NameXLOC_012826
Unique NameXLOC_012826
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000434:64905..74461-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012826 ID=XLOC_012826|Name=XLOC_012826|organism=Clytia hemisphaerica|type=gene|length=9557bp|location=Sequence derived from alignment at sc0000434:64905..74461- (Clytia hemisphaerica)
AAAACACAGAAAGAGTGATATAGTGAAACCAAATTGAAGGAGATCGATTA
AGTTGAGATTTTAGCCTAGAAATACCACCACANGAATTGAAAGGAGCTCG
AATAAGTTGAGATTTTAGCATAGAAATACCACCAAAAGGAGCTGAAAACA
TCAAAAAGACTTTCTTACAATTATAACATGATGATGGAGATAAAAAGATG
GCTCAGATTTGTGCTACTAGTTTTGATGTTGGTGTATGCGAGAGGATACA
ATATGGAGATAAAAGGATACAATAAGGAGATGAATAACTCGGACAACGAA
GACGACCCTTGCAACAATGCCATGAATGAATGTTTAGCAGAGGCTAAATG
CCGAAAGAAATTGCAAAGGTAAGAGGAGCGGTTTACATTAGTTTGATTTT
GAGCAGAATACGTTAAGGGAAGAAATTTTGGCGGAAAGAAATTGAAATTA
ATTTGCCAAAATAAAATATTGCCCAATTTAATCTAATTTCAATTTATTCT
CTATTTCTCCTAAAAGCCCTTTTTTTCCTCTTTTTTTCAGCTAAAATATT
GAACAAAAATGGGTTGTTCGCCAAAACAAATTCCGCCAAATTGCACCAAA
AATTTCTTCTCTTAATACGTTATTTATTGTATGCTTCGTCAGAGGTCTCT
GTGAGTATTCCGTCTGTTTTACCGTCAATCCTGCGTGAAAAGGTCTCTGT
TAAAAAAAGTGTTTTTGAGAGGGTTCGCGTTTTGAAAAATCTCAAACTTA
GAAACTAAAAATGATATAAAGACTTTTTACAAGAATAAATCTTGAAATTT
TCCGCAGATATCGAGCATGACTGACGGGGATAGATTTTTAACAAATATGA
GAGCGAAAAGTGAAAGAGTTTTTCTCGCGAAAGCCCAATAAAGAAGGAAG
TACACGCTTTTTTTTTATAAGAATAGTGTACTTTGGCTGAGGGTGAGCAT
TATTCTTATTTTTCTATTTTTCTAAACAATAGGCCTATTGTTCTAACTCT
GAAATCTCACCCTGATATTCTTATAAAAAAAGCGTGTACATTGTGAGGCA
AATATCTTTGCGGGCGACAAGGGAACTTTCGATCGAATTGAAATCGAATG
CCGAAGGGATACAAATTTCGAGACACTCTTTGAAAAGGATAAAAATCTTC
ATTCTTACAATGTTCACACAGTTTTCCGAAGATTGTCTTGAAGATTCGAG
CAGCTGTAAAAGAAGATGTCTCTCACTCTGTTTAAGAAGAACTCATTCTG
GAGGAGGGGCATCATTGTATTCACAAATTAACCAGCTAATGATCGCAAAA
GAATTAACTTGTTTTGAATAAACGCCTCTTATAGTTAAAATCTAATTCTT
TGATCGTAGTTTTTATTATGTTGGGAGTTTAGATATGTGTAGTGGGAGGG
GAAAGAGAGTCGCCGGTGGGATGATCATTACTGTTACAACTGTCTCATAT
TGAAAAAGTTGAAAAGGTCCTGACGGTTTATAAAATCTACATCTAAAGAT
GTCCGTCCCTCATCGACGGTGGAGGTTGCGGGGAAGACCAAACCAGTGCG
GAAATGTATTTTTGAAAGCAAGTGCATCCTGATTAATAAGTTGAAAAGGT
ACCCGACATCTTAAATAAAAAATGTTTTATCAAGGAAATAGGGGGCATAG
CAAACCAACTTTCTCGGTTAAAAAAGCCATATTTTGAACACTTTCACTTT
AATACTATATGAAATCTTTTCGAATTCACACGAAATGAATCCCAAGAAAG
CACTTGGAACTTATGCTAGATTCGGTCTTGTTGTATTTCGTTCTTGCCAA
GTTGTCAGACAGGGTTAGTGAAAGGGGAAGATGTCTTAATCCGATAACGG
ATATACTTGTCTCGTATCGGGATTACTTTTAATCCAGGGGCGGGATTGTT
TTTTGATCCGTAAATTATGACTCGTTCAAGAGAGAGTTTGTTTATGTTAA
GTTGCACAAGCTTATTTGATCTGTCCCTACTTCCCCTTTTACAAGATTTT
CCCAAGCAAATATTTTAATTAGCTTTCGTCATAAAATATTCAGTGTAAAT
GAATGCCCTTGTGTTAAAAGCTGCGTGAAATGAGGATTGCCAACGAGTTC
ATAAGGGGCTTCACATGACGTCATTAGTGTCCGAATTTCATCGCATTCAA
GCGCTCACAAACAAAAATTCAGACCCAATCTCTTTGCAAATTCAGGTCTG
ATAGATAAACAGTGGAGTCTTTATGGCTCGAACACGCACGGGGAATACAA
ATTTGTTCGAGTTAAGGAAATTTCGAGTTATGGAGATTGGTTTATAAGGC
ATTTTTAATTGAAGGGGCCAGAAAACTTGATCGAGTTGAGGAGATATTCG
AGTTATAGAGGTTCGATTTAACAAGATTCTATTATATTTAATAGAAGAGT
ACGAGATGTCATTTTTTTTTCTAAAGAAAGGGAACACTTTATTCCGAAGA
GATTCTGAAAATTTATGACTTCAAAACAACAAAACAAAATTTGTTTACAA
GATGCAATTGCGTTAGTGCTATTGTTTACTTTGTTGACATGCTCCATTTC
GTCTCGAAAATTGGGAGACTGAGTATTTCGTCATCACATCTCGTGGTCAA
GGCTTATTCAACATTTTCCCATGAATAGAAAATATTGTGCCTTAAAACAG
ACATGTTATTTTTCTATACTCCCAATTACGTATTTATTTATGCTGTAATA
CGAGAAAAAGCTGAAAAATAGTCAGGGAGGCAGCCAAAGATAGTCAAGAA
CGATCCATTAGACATGGTTTTTGTGCGATTTCCTAAGAAGAAAAGTTGGG
TATTTCGTCCATAAAGCCTTTAAATGTTCTTAACTTGTTCTTAATTTTTT
GGCAATCTAAGCCTTATGTTCTTACTATAATATAACGTTTGTTTTTACAA
CAAGTGATACTTTTATGGACCTACCTAGTTATGCATTTAACACATATATA
ATTGATATCTACGTGAGCATGAGCGTGACCGTTAAACAATCATTCAGAAC
ACAAATAGTGACGATCTATTAAAATTAGTCGTTTGTTTCTTATAAAAAAA
ACGTTTAAAAACCAAAATTTCATGCTCTTGAAATATTCTTTCATATATTC
AAGACTTTGTGAGCAAAAAAATATCTCTCATCAAAAAATTGAGTGATTTG
GCTAAGAACATTGATGTATGCTTATCAATAGTGATTCTTATAGATAAACA
TGCGCATTTGAGCCAACAAATTCTTTTTGAAAAAATCTACTTGAGCCATC
TTTTACCTATGATGGTACCCTACTTTCATGCAAAAAATCAGAAAAAGTTA
ATGATTCAATTTTTCACAAAGTCCAAAAAACCCGTTCTTTAGCCGTTTTT
TGGCCCAAATTTGCCCCCCAATTATTTTTTTTTTGAAAGTCAGGCTCCGT
CACATTCGAGGGTTTATAGTTATGCATCTTTGTGCAAAAAATCATAAAGA
ATCAAAGAGGCAATCTCGAGAAAAGCTAATACCTAGGTAATTGATAATGT
GCTTATAAATAAATATCGAATTTGGTCAGTTTTTCTATAAAAACACGCCA
AGCAACCAAAATTTCATTTCTAAACACACACATTCTTCAAAAGTAAGCCC
TCATGAGCAAAAAAACATCTATCTCATAAAAAAATTGAGTAATTTAACTA
AGAACATTGATGTATGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTGAGCCAAA
AATTTTTTTTTGAAAAAATCTGCTTGAGCCATCTTTTACCTATGATGGTA
CCCTACTTTCATGCAAAAAATCAGAAAAAGTTAACGAACCAATTTTTCAC
AAAGTCCTAAAAACCCGTTTTTTAGCCGTTTTTTGGCCCAAATTTGCCCA
AAATTTTTTTTTTCGAAAATCGGGCTCCGTCACATTTGAGGGTTTATAGT
TACACATCTTTGTGCAAAAAATCAGAAAAAACTAATGAGCCAATCACGAG
GAAAGCTAATAACGAACGGACGAACGGACAAAGGTTAATTTATAGGACCT
CCACCCCACCGGGGGAGGTCCAAAAAACGTGTATAAGGCTGACTTCAACT
AAGCATGTTAGTAGGAAGATCTGTAGGTGATATTTTGCCCAAACGATAAT
GATTTAATCAATTTCGACATCAGATGACCTTTAAAGGATTCTTTTTGGCA
AAGTGACAATTCTCTCAAAGTGTTGGTTATCATAGTAGTCAAATTGCGGT
GTTTTGATTAGATGACTATCCTCTTGACGAACGATACACCCCAACATAAT
GGTTGTTGTGAGAGACATATTTGAAGTGTGAGAGAATTTCTTTACGAGCT
CAAACATGAATGAATATCTGTAAAGCAATCTTTAAGAAAGCCTGACGGGG
AAATGTGTATGAATTGAATGTTCTAAAAAAACTGTCAATGTATGGATCTC
GTACCAAGAGACACGTTTTGATTTATTAATGGACGTGATATGTGATACTT
GAGAGCTATCAGAATCATAAAAAAGTGAGCTAAGGAACTGGGTTCAAGTT
TGTCAATAACATCTCATGTTGAGGAGGCGTGACAACCAGAGGGTAAGCAA
TTTCGAGAAAATTGAAGGCCACCAGTTTTAAAAGTTCAAAATCAAGGAGC
TCTACCAACGTGGTAGACGAATCAAATTGTCTTCTTGGTAGAAAAACTTC
TTGTAGTTGAGTTAAAAAACGAGGGTGTAGCTTTATCAAAACAATCATAC
ATTTTTATTTCTGAAAAAGCCCGCTATCGATTTACGATTAATTTGATTTC
TATAAGGTGTATCGGTAAACTACTCTTGACTTAGAGAACTAAGGGAAAAT
GGATTTGAACGAAATAAAGAACAAATTGACGTCAATGCGCCAACAGATCA
CATTCTATGTACCAAACATCATTCTAGAAGCGCTTAAGTGTAGACAAATC
TCTTCGAAATGTCAACAACATCTGTCTTGTTGATGTGTAAACAAATTTGA
CGATGATGGGGTAGGACTTAGTATGTGTGAGAGCAAGAGAGTAAATGAGC
AAGCGAGTGATTTGATGGATGAACGAGCGATATTGGATTTATTTAGTTCT
TTCTCTTTCGTCTTACGAATATAATTTGATGAATTATCAGAGTGAAATGA
CGAGTGCACGCATAGGCGAGTGAGTGAGTGAGTGCGTGAGTGAGAGAGTT
GTTGACACTATCTAATTCGACGTTCTACTAAACGATCACGCTCCATTATT
CGATGATACTGAAAGTCGCCATCAACAAAAACTTTCATAAACGACGCTTT
ACTATTCGATGAAAATGCAATTCCCCTTGAAAATTGAATCAGAGAGCGTC
AACGGTACTTATTGATCGATCGATTTTCTTTTTTTACAGATTGCGAGACA
CATGCAAGGACTTGTTCAGTAATTTCAACTACATGTCAAGCGAGTCATCA
AAAATCTCTTGCTCACCTCAATGTCGACGACGTCTCATCAACGCAAAGAA
ACATTATCAGTTGAAAACCCTCTTAACGTGCAAAACAAAGAAAAGTTATT
TTTTCCCTTACCAAGAGCGAGCTGAACGATGCATTGCTGGTAAAATCGAT
GCTAAAGTCCACGAAAATTTTGTCCAAGATGGTTGTTCCAATGTTTTTCA
AGATTGTATGAAATTTCACCGGTGCCGTAAGCGTTACCAGCGAATGATGT
TTGAATGTTCTGAAATGGTAAACGGACAGAAATGCACAACAACGTGTGAA
AAGAGCCTAAAGAAATTTTTAGTCTCTCAACACATTTCAGGATTCTATCA
ATGTCGGTGTGATGGTGCCATCTATTTTCAACAGACTTGCCATTCCTTGA
AACAGAACATTTTGAATTTGTGTGTTTCAAATCAATTCAAAGGATTTTTG
AGTAAAAGAGAATTATTACTAATCAAATGAATATAAAGTAGAACACACCC
TAATTGAGTATAAAATCACTGATATCCATTTATCCTGGGTACAGTTTTCG
ATAAAGTGGTACCCTAATGGTAACACTACTCAATGTGGGTGGAAAAGATT
TGAACGGAAAATTTCATTTAGTTATAAATTGACCAACATTGAGTAGAGCC
ACAACAGTTAGGGTGCCACTTTTCTAAGAATTCTAACTAAAGATCGCGGA
TTTAGTCCAAGGCTTTTAAAAATCAGCATAAATGACACACCTTAATTCGA
ACCTCTGTTATTCTCTAATTCGATTAGATTCGAAATCTAACGATAGACCT
CTTAGCAAGAAAAGAATTACGTGAAACTCTCTTCGTAATTCGAGGTTCTG
AAGCGAAAAATCGCCTTCTTACTACTGACGATCCAATTACAGTGAACTTT
ACATTTTACAAGCAAACAAATAGATGACAAAAAATAAAAAATAAAGTATT
TATACCTTAACAAATACAGGCACCATATATTAGTTTCCAGAACTGCGTCA
TTAGGTTATCAGTGTTTCTTGACAGCAATTTTTATTCAATATTATTTATT
TTTGCTTTATTTTTCTAACACTAAAAATATAAAGAACATGTAAACCATTT
TTAATCTTTAAATTCAAACTTTCGTTCGGCTCGAGATTCTCTTTGATACA
CAGTGCTTTAAGGCCAAAAATTCAGACACTTCCAAGTGGTGAAAGCTTAT
TTTTTTCTCAAGTTTAAATTAGTGTCTGTTGCAAACAATAAAAAGCAATA
TAAATTTGATGAAACTTTATTATTTTGGACAATTGTTCCTTATTTTTTGA
TAATTCATTCATATAAAAACCTATAAAGACTTTAATAAATTTATAATATT
CTATAATATATGACTAATTTTACCCTTGAATTTTTGACATAATTCTTAAA
AAAATATTAAAATGAGAATTTTCTTTATAGTTACTGTACAGAGCAACCAT
GTAAATATACAAAATATGAATTTATACTTTTTTGAAAACTTGAACTTGGC
TCATTTCAAATACCGTAATACTTTGAATAAACACCCCTCAATTAAGCGCC
CCTCAACTAAGCGCCCCTCCTTAAAACCAAATAAAGTTTATAAACGCCCA
GGGCGTTTATTCGAAGTACGGTATGTACTTAGAATTTTCATATCTTCCTG
AGACCAATTGAAAGGACCCTCCAAAGTAAGCTAAGAAAAGCAAAAGGTGT
AAAAATTGATTTAAAAAATGAACTAGAATTCTTTTGATAAAAAACGTGAT
AAAAGTTATCAAAATTTATGTACAAGAACCACGGGTATATGCATAGAGGT
GCGTGGCCTCCTCCCTTTTTTTGCAGACTAATTTTTATAAACCTTAAAAG
CTTATGTTTTTATCTTATTAAACGTTTTAGGGTGTTCAGAATGTGCTAAA
AGTAAAATATTTGCTTCGTGACAAACTAAGGTTAGGGACCGCAATGGTTT
TTTCAAATTGTTTTTAGCGCATTGAAACCATGCTCATTGGAAAGAGCATC
AAAAAAGAAAAAAAATGAGGGGTCATTCATCAAAATCGGCCAAGCCGTTC
TCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCCAAGCCGTTCTCGAGATATGAAATTTTCTATCTCCTGAAAAT
GACCCTTTCTTTGGAACGATTTTCGAGGATTTTTGGAAAAATCATGGTTA
AATAGGTGTAAAAGTGAAAATCCGGGGGTTATGTCGAAAAATACATTTTT
TGCAATAACTTTACTTCTAATGCTATAGCATTGAAACTTGGCACGAAGGT
TTTCAAGACAAAGTTTTAATTTTTTATCAATTTTTTTTTTCAAATTTTTC
GTTTGCCGTACGAATGAATCGAAAATATCCTGTATGCCGGAGAGCTGGCA
GATTGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCAAACTTTTACAGGACATTTATTTAATGATAA
GAATGCTTCTAAAACTTATCCCATGGTTATAGGTGGTCTAAAACCTAAAA
ACAACATTTTGGTCGATTCCAGCCATTTTACCCCCGTCTTTCGCGGTCCC
TACTAAGGTGGGCGAAAATTTTGCCATTCCCACCTCGAATGGGACCATTT
TACTTTCCATCTATGCTTCATTGCTGTTCGTTTCTCTTTTTCACTCTGCA
ACCCAATGTGTGGCAAGGCAAAGAGACCCTATGCAAGTAGGTAGAGTTTG
ATCGCAGATAAAAAAGTGTAGCTTAAAACTTAACATAAACTGAGCTCATA
GAACAATTAGATTTATAATCGCACGATGAGCTATTTTTTCTTATTTGGCG
CGCCTTCAAAGAGAGCAATTAATCGTTAATTGCATCCTTTAGAGAGCAAT
TAATCGTTAATCACACTCTTCAATGCAGCGCCAATTTTACAAAATTGATT
TTAATGTTTTTTCTTATATTCTTTTTTCATCGAACGTTTTAATTGCATTC
GAAATTAGTTTTGTGAGAAAGAAAATCTATAAACAACAATATATGGTTTG
GTAATCGTCAGTAAATAATCATTAGTAAATCATAGTTTTTGTTTAAAAAG
AAAACATTGCAGTGTAATTTTTCTTTTCGTTTTTATATTGAAGAAAAAAA
ATGTCTTTGTTTTTTATTATATAGTAAAAAAGTCTCTGACACAGGATTTG
GGAGAGAAAAGAATAAGGGGACAAAAGTGTCCCCCCGCCGAAGAGTGCAA
AAAGTGGTAATAGTGCAATTAACGATTAATCGCACTCCTCTAAACCAATC
AGATTCGAGTAATTTTGCACGGCTGACGATTACATAATATACTAATTAAA
AATCATTTTGGACGCTGAAAAAGCTGAAGCAATTATTTCAAACAAAAATA
TCGCATTCGATTAATAATTGTACAAAATATGGACCAACAATATTTCTCCA
AAAATGAAGACTCGACGTTCAAAACAACATTTAACTATGAATTAGTTTTG
TTCCAGCCCAGTTTTTCGAGCACCATTCTGATAGCTTTATCGTCACCAAG
CCTTTTCTTTAAAGAGTCCTGTAAGAAAGAAGAAACATCCTTGAATAGTA
GTAGTAGATTGGAATCGTTTATAAGTCTACGTGTAATAAATTAATAACAT
CGTTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022827TCONS_00022827Clytia hemisphaericatranscript
TCONS_00022826TCONS_00022826Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022827-proteinTCONS_00022827-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000434supercontigsc0000434:64905..74461 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.25	0.19	0.21	0.23	0.18	0.76	1.05	0.97	0.92	1.21	0.79	12.51	10.91	14.49	17.38	1.29	2.52	2	1.86	1.11	1.11	0.47	0.41	0.81	0.87	0.75	0.47	0.68	0.53