XLOC_012802 (gene) - C. hemisphaerica

Overview
NameXLOC_012802
Unique NameXLOC_012802
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000432:69828..73263-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012802 ID=XLOC_012802|Name=XLOC_012802|organism=Clytia hemisphaerica|type=gene|length=3436bp|location=Sequence derived from alignment at sc0000432:69828..73263- (Clytia hemisphaerica)
GTCGGGGCTTAAGTTTGCCTCTAGCCTTAAGCATGATCAACATCCCCTTA
TTCATCCCAAATCCCGCCTAACACACACCTCGTTTCGACTATCAAATTCA
GAATATAGGTCGCACAAAACAGGTGAGATTCATGGTAACCAATGGAAAAG
TTCCCCCGAAATTTCTGTGCATAGACGACCACACTATAAAGCTCATGTAC
AATGATCCAAGAGAATTTATTTTTTGTTACGGCTCGGGGATGGGTCTGAC
CGAAGGGGTGGAGGAGGTCTCTAGGTCATCTCGAACCCAGCCTGGGCACG
AAGAAGCAGTCGTGCCCAGCACAGAAAGAGAGTTCAACTTTGGCAAAGAT
GAAGATGGGAAAATAGTACAACAAATTACAATTAAAAACTGTAAAGACGA
TGCTATTGTAGTAGACGAAGAGAAATCTGAACAAAACACCAAACCAAAAC
CTAAAAACGAAACTAAAAAGGAACAAGACAGAAAAAAATTGTTGAAGCGC
TGTTTATGTTACGCGCACCATTTCTGATTTCACCCCCACCGCGCGCCATT
CCTGCTACTATTGCATTGTGGCGTTCTGGCGCCCTGTCCCTCCGGATATT
CTTCCATTTTGTTTTGGCTGCTTCCTTCGATTTTACAGCTATCAGAGTCA
GTAACTTCTCAGAAAATTTTATATCTTTCGTTATCTCCTGCATCATTCGG
TGGATTTCGATAAACTATGGTTATCTTACAATCTCTATTGAGCACTGCTT
ATGTATTGCTGTTTATCTCGTTCGATTTCTCCGTCTGTGTTAAAAGAAAG
CTCAACAGTGGTCAACTTCCCCTCACAGCCTCCGGAAATGATCCACCAGC
TCAACACCAACGGTATGATCCCGCACTTGTTGCATCTTTGCCTCCACAGC
AGCGCTCCTTAGAGCAATGGTCCTCTCTCCCATTGGAATCGCTACGGTTA
CACACCAATGCAGATAATGTCCCCACAGCTACACAGCTACCCAGATCGCT
GCCGCCCTTTACCACCACCATCAGTCGGTTTTAACACCAGCGGCTTCAAG
CGTTTTAACACCTGCTGTCGACGATACCGGACCTCCAAACAGCCCTGACA
AATTTTAAAAGAATAGGAATTACTCCGCAACAATTTCTCGATCAACAAGA
CACTTCTTCAAAGGTCAACACTAAAACGCAACAAAAAGAAAAACCTCAAA
AATCTCAAAACACCGAATCAAAGATAGGATCTTCCAAAAAAAAACCGGTA
ATCACTGAATCAAAGATAGGAAAAAACAAAACCAACGCTTCACCTATGAA
AACGAGTGAACCGAACGTCGATATGGACACCGGAACCGAAGATCAACAAG
TCTCACCCTCCGGTGAGGCGAAAATTGACTTCACCAAAACAATCGAACAA
ACTATCAAGACCGGGAAATCCGTAAAGAGGAAGGGAAGGGCCTTATCCGC
CAGAGACGAGAACGTTCAGATGACCAGGAGACGACCTCCAAAAGAGGGAA
AACGGAATCGCCAAAACAGGATGACCCACCTGGGCTGGGGGAGGGTGTCC
AGGAGGCCGAGTCTGCCCTTGAAGGGAAGATCCCCCCCTGAGTCTAATCC
GGAAGTTAACTTAGTGGAACCAAATCTCAGTGAGAGGAGGAGGGAGAAGT
GGAACTTGACTACAATGAGGAAAGCCCAACTCGAACACTCTCTCAAAAAT
ACGAAAGTGAAGGGGACACAATTATCTCTGACGAAACCTTCCCAGACGCT
GACTCTGAGAAACTTCAGATAGATGAGGGGGAAAACTCGAACAAAATTGA
ACAATTCGACACCCAGTCAACACCACCCGGGGAAAACAGTAATGTAGATG
AAATCAAAGAATTCTCCGGCACTAGTTCGAAACCCGACGCCCAGTCAACA
CCCAGTTCCACACACAGTCCAACCCCATCCTTTTCGTTTTTTGAACCAAC
ACTTGATCTGAAATCCTTGGGAGAAGAACAAACCCACATTTTCATGAGGA
AGATCCAAAATAGGAATAAAACAATAAAAGCTGATATAAAACGGGTTAGA
CAAGGAAACCCTGAAAACTATAAGTCAAAGGAAAACTTTAAGAATTGGAC
CATTGAAAAAACCAAAATTCAAAAAGACGTAGAAAAACTAAGGAGGTTGA
AACCCAATTTGTGGAAAAAGGCAAACCTTCTGGAACCCGTCACTTTCAGA
CCATCCTCCGGAACAGCGGTAAAATCCCCCCCCAAAGTCAATCGCAGCCA
AAAAGCTGAAGAAATGGCCAAGACAGAGGCAAACACCGGGGGAAACTAGC
CGCTGACAAAAAGAAAATGCTCGACCGGGTGACCCCAGATCGACACCCAA
ACGTCCCCTTGACAAAATTCGAATTTAATGCGCTTTGGAAAAAATTGAGG
GAAGATCATAGGAACGCAGAAACCTACCCAAAACTGGAACCCAGAATAGC
AAATGGGAAGCTAATGAGAATGGGATCCATCACATCTCTGATGTGTGGGG
TTGTTGCAGAGATATACCTCCAGAACGTTGCGAAAATGCTTTGCATCAAA
TTTCCATCATTCATCAAAAATCTAATTGCCCCAAAAGAAATAAAGGAAGC
GTTGATCACGAATGCTTGTGTGATCCAAACCCCTTTCAGTACCCAGAATG
CGGATATAGAAGCAATCAACAAATCCATGAAGGTCAGATTAAACCTTGGG
GAGGAATGCGATGATAGCCTATNAATGCGGATATAGAAGCAATCAACAAC
TCCATGAAGATCAGATTAAACCTTGGGGAGGAATGCGATGATAGCCTATA
CCAACTATACCAGAAACATCCTAATTTTTTCGATATTCCTAACTAAAAAT
GACTGAAAAAAATATTTGTAACTTGGAACTTTGAAACATGCCTTCCAGTA
CCCATGTCTTTTCCTTGGCTCTATTGGTTTTTATTCGGTCAAAAGTGAGA
TTTGTTCTCCATACGGTTTGTGCCCGATACAATCAATAATTTGTTCCAAA
TCAATGACTAATTGATAACCTCAATAGATTGGAGGGGGTTTCAGCTTTTA
CGTAGGAACATACCTTTTTTTTGTTTTCCTCCTGTCAGATCTACAAACAA
CAAAGAATGGCCGAATTCTTTTTCCTCTTAGAGAGACGATGTTATAATGA
AAGGGTAATTAGTCTTCTCTGGGTCCCCCTGTCTATATATATTATATACA
GAATTATACAAAACATAGACTAGACTGTATAAGGTAGGTTACCCTATTAC
CGTCAGGTTGTCTAATCCCGACCACCCCTATCTATCCACCCATTGAAACC
CCCTATTAGATATCAATTAATAAAGATAACTAGCCGTATGCGCAGCGTCG
CACGCTGCGTGTCCCAATCCAGTGAATCACTACACATCTAAAAAATTCTA
ACGGAAGAAAGATAGCCGCCGATCGATGATTTGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022789TCONS_00022789Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022789-proteinTCONS_00022789-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000432supercontigsc0000432:69828..73263 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.31	0.23	0.44	0.34	1.17	0.84	0.63	0.65	0.28	0.37	0.52	0.23	0.31	0.31	0.31	0.38	0.31	0.35	0.32	0.35	0.53	0.49	0.17	0.28	0.3	0.58	0.25	0.17	0.25	0.27