XLOC_012179 (gene) - C. hemisphaerica

Overview
NameXLOC_012179
Unique NameXLOC_012179
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000393:183700..190179+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012179 ID=XLOC_012179|Name=XLOC_012179|organism=Clytia hemisphaerica|type=gene|length=6480bp|location=Sequence derived from alignment at sc0000393:183700..190179+ (Clytia hemisphaerica)
cccccccccctgggtctTGCCACAACAAATATCTTACAGAATTTTCTCTC TCGTTGTAATTATTTCTTAGTTTCTTAGTGTTAATCCTATGTTCCCGTTT CTGTTGTAGAACAtataaaaaaactaacaaatCCGATCAGAACTTTGGAT GACTGCAAAACAACTGTGAATATCactcaaattttgaattttggttcaat tccacaaagaaaaaaactacATAACTAAGATAATTCGGAAAACTGGAGTA ATTgagaaaagaaaactttcaaataattACTGGAAAATATGTCAGGAATG GATTTCTTCTCCCGTAGCAATGCAGCAAAACCGACTGCAATGCAATGTAC ATGGCGTACCTATGGCTGTCTAAAAGAGGTATGGATATACTATtcttccc agtccttttttaaTGGTCCAGTTACATGTAATAAGTGATGCCAGTAAAAT AGTGAGTCTATTTGACCCGGTGGTACCTTGTCTgtacagacccagtatct acagctaatttcaaaattcattgccgtagagggtctgttgtcattgtctt ttctcatttgagattttttaaaccgACCGCTACGATGGAGTGTTGGCGAG AGAGGGGTCAGGCGATAGATAAGAGttgtgttgctatttataaatcatac ttcatcgcagaggtctccgtacggggatttttttcatcaaacagacaatg caccCAGAGTGTACTAtgaaacgataaacgtgagatacactctggtacag tgTAGTGGTACCCAAACCACACTGGAAGATTTGACCAGAATTTTATCTTC AACGTGGAGAAAATACTCTTCAAGTTTATAGCTTTCCTGGGGGAAGTTGA CTTCAACTTTTTCCCTAATTGAACTGGGAAAAATGCACTTCAAACCACCC CCAACTAGAAATTTATGAGCTGGGAGCATTAGAACTTTTAATCCAATTGC aggggttttgctttgtttttggtaggctggcgaatgaaaaaaattaactc tggcgatttctagattctaggccggcgaattcttagcaagcccaacgtat tgattagcgtaaaaaaaaaaaatgaaaaagcgtAAAAAATGTACTTGAGG CGGCGAACCGAACTTTTCGAACGGCGAAATGTAATTTTTCCCTTACCTTG GACCGGCAAACTTTGCCGTTCGCCGGGCCTAAATAAGACCCCTGCAATCG GGATTTTGAACGAAACTTTTATCCCCACGGTTGGAAAAGTTTCACCGGTG CACTGAGAAAAGGGTGTATTTGTGTGACATGGCTTTTCTCGGTAACCAGT GAAAGTTGAAAACTTATTTGCaggaaattcaaatttgataaaaactcTTT TTATACACGGTACACTGGTAGTAAATACAAATGTTACAAGACTAAGATTT AAATTTCAACATAGGGAATCAACAACGAAATGACTCACCAATTTTTCCTT TTGGAATACAGTCGAGTCTATGTTCGCGCGTAACAGTTCCGTTTCGcacc gaaacgaaatgaagccattctattggttgaatTCAAGTTGTACGTCATTT CCAACCAATAGAATGGTATCGTTTCGTTTCAGAACATAGTCTGAGTCTCC ATAACTtaaacacgcacggggaacacaaatttgtccGATTTCAGGAAATT TCGAGTAATTGAGCATAAGttttataaggtattgttaactgaagggacga gaaaacttgttcgagttaagggggcagtcgagttatagaggttcgagtta aagagactctactgtattttaTTTCCAGTTCAACAACCAAGACGATAAAA TCGTCCATGAAGCCACCTGTCAAGTTACAAATATCAGTTATGCCAAAGtc aaagaaacaaataaaattgTCGATCTTCGGGACAAAGCTAAAGAAATCTA CAAGCTAAGAATCCCAGGAGTAGAAGCAAGACGTGATAAATTGGCTGAAA TACATAGTAATTTAACTGAAGAATTGAGAATTGAAGTAGACAAGAAACAA GAAAATGAACAAAGGTATTTGATTGGTTTATACCGGGTGTCTCAGAAAAA AGTCTCCCTCTTATACCCTCATTTTTCgcctttttcgacttttttgaaaa gtaatattttaacattttaggccataacttttgatgtagttgaccaaatt tgacaaatgaccccttaaaatttaagtttatccttcctttttccaatgca aaaggatCGATTCTTTAACAGTTCATAGTACTCAGGAAATCTCACTTCAA AGagggggacttttttctgggacatgCTTTTTCTgttcatcctctagcga aaaaaaatcatatggGATGTATATCTATAGGTCTATGATTCAGACTATAA TTTTGTTTGTAGAGTTTTTTAATCGTTTTCAAGGTTCATTGTGAATATGC CTGTTACACGTCTTTtatattataagaatatccaaagtttttgaagcctt cgaatgttcttaatgGGACATAAAattagtaaaatgtaaacattgcgcga accacgtgtcattaaagagaacaattgaaATCACgcgtccaaaacaaact tgtaaaacaattgatgaatcaaaattagccatatttggtttgatttttgg acctaccgggaggtcctttaatttgaccgttgtccgttcgtctgttacaa gcttttctcgggattagctcattagtttttttttattttttagtgcaagg taccctaaaaagtggctgaagtaatttttctcggaaaattttttttcgtc gtaaaatacggattttcgttttttggggaaattcccttttaccattttcc tgttagcagctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcgggattggctca ttagttttttttaattttttgcacaatgatacaaaatagcaatgcctaaa aagtgacggagcccgatttttgaaaaaaaaatttcgggggcaaatttggg tcaaaaactacctaaaaataaggttttttggactttgtgcaaaaatgctt cattagtttttcttgatttttggcagaaagatagagtgcaaggcacccta aaatgtggctgaagtaatttttctcggaaaattttttttcgtcgtaaaat acggATTTTCGCAAGTTTGGGCCAAAAACTACCTAAAAATAAGGTttttt ggacttggtgcaaaattgcttcattagtttttcctgattttatgtataaa gatggagggcaaggttctctaaaaagtggctgaagcagtttttttcggaa attttttttggccgtaaaaatcggattttcttattcggggaaattccctt atatcatttttagggaaaaagagcatttctTGCGATTGGATTGATANNct gtgaaattgcttcattagttttttctgatttttggagaaagatgaagggc aaggttctctaaaacgtgactgaagtagttttttttcggaaaatttattt tggccgtaaaaatcggattttcttatttggggaaattcccttttgtcata tttagggaaaatgagcatttctcgagattggcttggtatttttttcttat tttttgtatagtggtaatttgggtagaaaagtgcctaatgtttgtttttt ttttagacttttttgactaatttgagTTCTGAAACtcacggtaatctatt caagctgctcactacactttcttattcccttgctatttgtcctatttttt tctgattttgatcgacaggtaggtccattcagcatNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCttgtttattt tgacatgtgacatttgttttgattttgtatccgctgcatacagtttgttt acaaatttcgcaagtactgttatgtccctttaaattcTTTGCAATATTCA CTTTTTATTGCTTGGAAAAACCTCCAAACACGccatttagcccttcgggc tttgcAGAAATCTTCTAATTTACCCATGCGATGTCACACAGCTGGCACAC GAAGTAACTTTAACTTTCGTATGCTTTATTCTCTTAAatatagttgacgc tctctaattcgacgttctactattcgatacgctccattgttcgataatat tgaaagtcaccgtcaacaagaaaccctcataaacgacgctctactatttg atacactcccttattcgatgaaaacccttttccccttgaaaatcgaatta gagagcatcaactcaAAGGGCAGttgtttcgatgtttttgtCTGCCATGT GTTTGCTGTGATATACAAGGGAATTCGTACAACCTATGTTTTCGTGAATt ggaattgtattttttttcaggcTTGGCATAGTTACAACGGATACTGGTGA ACGAAAAGTCGTTTATTTTAAAGGTATGATAAGTACActtttcccgtaat tcaaaacTGGAGCCGCACTCCATCACtttgttgggggggggggcagacaA ACGTTTTACATGTGAGGGGTTaaggaaagtgggttttcagcaTCAAACTT TGGACATTGATCTTTGTTCATtttggggaaaaaattttaGGTTCATGCAT ATCATAAACACTTGAAAATTTGAGAGGGTTTTGTTTGACCGAACTTACga aaagctcataaaagatGAACTTTTCCTGAGGAAACACAGTCAAAAACGTA CTTGTTCACTTCCACAGATCAAACAGTGGAAAGCAATAAAATATATGCGC AACTGTTTTGCGGATTGTTGGAATGGTGTATTTgtatttgaatatttctg atagggtttattttatgttttattgtATGGGACAAAGTTAATGTTTTGCT AAATTCGACCAAATCGTACTGTGAAGCGTCAAGTTTTTTAGATACTGTCG TTTTTATTTGTACTTTTCAACGCTACTGGGTGCTGGCCCCTTCTTTTTTG TGCCTAATAAACAGGGTGGTAGGAAATCAAAGGGGGTactggaaaaatct ttaaatcttaataaacgggggacctaaataaacggggggagtTGGACATT GTACCTCTAGATACCTCCAAAATAAAGTActggctatttagagcaaaata agggacccATCCTTTTACAGCtgaaagtattttcaaaaattaataaatgg ggGTCTAAATAAGGTCCGAggaggttggaaaaaaattaaacttaccAAGC GGGGGGCAGGCGTCTATGAAAGTAGCTTTAATGAGTGTAATTACCTTTTT ATTACCATTAGATTTAGTCACACTTATCCAACAAGATGACCTCGAAACTT TCGTCCAATACACAGCAACGGCAGAAAACCTTTTCAAATTAGTTGATGGT AGTGGTGACACCCTCTTACACCATGCAGCCCAAAAGAAACGCCCTGAAAT TGCTTTCTGGTTAATTCAAAATGGTTTAGAACCAAGCACCAAAGATCACA ATGGATTCAATATCGCTCAAATAGCTGTTAGCATTGATACGTTACCCATA TTGAAGGTAGCTTTAGATACAGACTCTTCTTTGACCAATATCCAGGACGG AAATGGCGCCACCTTATTGCACTGGGCCCTAGAGTTAGACCACGTGGAAA TAGCTAAGTACTTATTATCAAGAGTAGACCTTGACGtggatttgaaaaat aattcggATAAAAAACCAGATGAGATTGATGgtttgaataaagaaatgaa gaaattgaTCAAAAATCATCGATAAATAAAATGGTTTATCTGTCAAACGT CAATAAGTAGCCGACAATCTCTGGTAGAAAAAACCTCCAAACATTGTGCT TTTCCTGAAGACTTACGGATTCGCTAACTATGAAATATCAGACCTTACAG ATTCGCTAAGTGTAAAATGTTATACTTTACGGATTCGCTAAGCGTATTTC ATGTTTGAAATTTGTTAAGTACAAAtctgaagtttttaaaaaatttgaaa agtctCCAAAAATCTTAATATTATagaccttatcagagtttttgattttt ctaaaaaagcgatgcattgtgggattgtttcgagcgaatcacaatagaat tccctcgaggaattcctaagagatttctattgtaatacactcgaaacaat gcatcgcttttttagaaaaatcaaatttcatatattttacaagaatttga gaattatgaaaatattttctaacaTTTTATAATCTATCATTTCACAGCAT AAACACTTGTATTTATAGTAAAATATACTAATTTTATAGGCCCTTAtcgt tcattttttttgtaacttCGCCTCAAATTTTGACTTAGACTGTGCTATAG tttaagacaaatcactatctaagaaataag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021710TCONS_00021710Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021710-proteinTCONS_00021710-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:183700..190179 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.69 37.82 51.93 48.27 2.58 2.17 12.21 10.77 6.77 7.52 5.15 5.38 5.25 5.03 2.61 3.25 10.77 17.35 10.18 10.38 7.06 7.72 17.87 17.28 5.09 5.5 3.19 2.95 6.83 7.83