XLOC_012057 (gene) - C. hemisphaerica

Overview
NameXLOC_012057
Unique NameXLOC_012057
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000388:43389..52963-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012057 ID=XLOC_012057|Name=XLOC_012057|organism=Clytia hemisphaerica|type=gene|length=9575bp|location=Sequence derived from alignment at sc0000388:43389..52963- (Clytia hemisphaerica)
AATTCCCAGAAAAAGATTCATAGAGCCATTACGTAATCGTTATTCAAATA
AGGAAGAACGAGCTCCAAATATGGGAGCCACGCATGCGCAGCAAAATGAA
AACATTTGATTCACTTCATGGCTGGAGCTAAGCTTTGAGAAGCTTGATTG
TCAGCTTGTGATTGTGAGTAAAAGACTGGGTAAGTTTTTTCTTTATACTT
GTTTTTTTTTCGTTATTTTTGTATCATTTTCAAATGTAACATCCTAGTTT
AGAAGTGTAAAGCTCTGATGGTACGAAAACTTAGTCGGAAAAGGGGAAAC
AAGTATTCTGGTTTGAGAAATCTCTGGTCCTTTTTTTTTTGGGTGGGGGT
GGTGGTGGTTGAGTTTAATAGTCAATTCAATGAAATGGGAGCCTTCAAAA
ACATGCATAGCCATCAAATGCCTGACCATTCAAAGCAGCAAAATTTCAAA
TCAAATAAACCATGCAGCTCTGCTCGGTGCTCTACTCTACCATTTTAGAA
TCTCATATTTGCTGCGCAAAATTTTTTGCAACCTTTCAACATTTTGGGTC
AATAAAAACATATTCATATCATGTTTCAAAGTATTTCCATACAGTTTTTA
AAAAAAACAAAGATTGTTTTGAAAAATTCTGACAATATCAATGAAGGAAA
CTTTTTAGCCCTCTGCAAGATTTTTCATTTTCATTCTTTCAATATTTGAA
GATTAGTATTCTCAGTGGACAGTGCGGGTATACAAAGTTCTATGGCACTG
CAATTTTCCTCTTCCTCTACTAATACCATACATTTTGAAAACAGTATTAG
TCGGTTGGTAAGCTATTCCGAGTAGAATCTGATTTGCTCTGTGCCCGCAT
GTATGCACACTTAGCCATTATGTGGATTATGCCATTGCTAAGAGAATCTG
CCAAGGCTGACTAATTATTGAATGCTAATGACATTCAACGTGGTGGAAGG
AAATGAATCTTTTGTTGTGTTTGCGTGTGTATGTCATTATCATGTGATAC
AATAATGATATTCTCACTTCCATTTTAGCAAAAAAGTATACATAAACTGG
AATAAATGAATGTTTCACATAACACTATGGAAACCCCCTTGAACTATTGG
GATACTCTTCAGCTGTTGAAAAATCACTTCCCAGAGCGATACCAACTCCT
GTAAGCCAGTGTTTCTCATGATTTTACTGTCAATTTCTACTTACATTTTT
CTGATGAAACATCCTCATAGATACCGTGAGTGGTCCTAAATCCGACAGCC
CTGTCTAAATCCGATGGGGTCTTTCAAAGATACAAACTAAAATAAAAACA
AGCCTTTCGCTGTGACGCAACGAAGATACCAAAGTGTCAATTAAACTTAG
AGATTTGATATACATTGAACCAATTGAACCAAATAGAAATAACAATAATT
GCTTCTTATACAAAACATAATTTTTTATTGCAATATGTACAACAGCAGTA
ACAGCATCATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGGTCATTG
ACCTTGGTTGCTGCACAGGCGACTGAGGTTCGATTCCCACTCGCAGTGGT
TCACTTGGCAAGTGAATGAACCTTCGCCCAGGTCAACCCATGCCATGTGA
GGGGAATTGGGTAGTCAATCCAAGGTGCTGACGGGGCGCTAATTGAAAGC
GTCTATAGTTGCGAAAATAGGCCTCAAAGCCTCCTGCAACTCAACCAAAT
AGAATAGAAAAAGTAGAATTTAAATCAATCAGTTGAGCAATGATATAAAC
TCAATCTGTCAGTTTGTTCTTATGTTTTGGAAAAGTTATTGATGCTTCTA
CAACCTTTTTTAATAAATCTATCTCACATTTTTATCATTTTGTAGCATCG
CCCGCCTTCAACCATATCAAAATGATAATGTGGAAGCTGAATCAGATTCT
TATGAGGAGGCAAGAAGAGACTACAATCCAAAGTCTCTTAAAAGAAAACC
ATCATCTTATCGACAAGCAACCAAGCAACCAACAGAATCCGACAGCTATT
CGTGCTATGAGATTGATGAGAAAAAGATAAAACAAAATTATCAGACAGTT
GTAGTTGAAAGTGCGTGATTTTGAGAAAAATTTTTTTTATATCTTTCCTA
TCTTTCCTATCCTGTCCTATCATAATTTTACATATTAAAAGCTTTAAAAT
TCTATTAATGTTACTTTTTGACTTGTGAGTGTCGACTAGTACAGCCCTCG
AAATTCAAGTAAAAGTAAGTCGGCACGTAAGTGCCGTCCAAATCCGGCCG
AAGGCCGGCAAAATTTTGCCGACCTAAGCTTGTTTTTAGGTCGGCAATGC
CGATCTGAGCTATATTTTAGGTCGGCAAAGTTGTTTAAAGGCTACGGCAA
TGTTTGTTTTTTATTTGAGTGCGATATGGTTCTTATTAGAGACTTTCATT
TTACAGTTACAGGTCGGCTTTGCTGACCTAAAAAGATAACTTATGGTCGG
CTGCCGAGAGAATCAATGAATATGGTCGGCAATGAACTGCCGACCATACG
CACTCTTTGGTCGGCTTTTAGGTCGGCACTGCCGAATGCCGACCTGAAAT
TCGAGGGCTGCTAGTATTTTGATCAATAGTTGTTTCCTTTCAGAGAGATT
CGAAGCTTCTGCCTACATCTACTACCAAATACAACACAAATTATTGTGTA
TAAAAACTCTTTTTTCAAAAAAAATTTCATTTTCATTTGCATTTCTTAAA
GGTAATGGAAGCAATGACACGACCGCGTATGCAATACCATCAGAAAATAA
TTATCAAGAGGCTGAAGGTCTTGTTCTTGGGCAAGAAAGTTCTAACAAAG
TTCCACAAGAAACATCTTACCCACCATCTCCTGATATTATTATCACCAAT
GAAAATTACGATGACAAATTTCAACAGCTCACTGTGGAAAGTCCTCATAC
AGAGAAAGTTAATTTTTGTATAGATCATCACAATCACAAGAAGTTGACTG
ATACAGAGGTAACTGTATATCTTTGATAATTGATCATTGAAAGATGTTCA
TTACAGCTTTTCATGAATCACATTTATAACAGTTGTAACATAAGTATAAT
GTATAATTATGATTTTCATGAGCTAAATTTCAAATTAATCTCGAAATGAA
TTGAATGACTTGAAATTACAAAAATAAGTCATTTCTTAATAATTCTTCTT
TTTATATTTTTCAGTTTGCAAATCTCTCACATATTTACCATGCATACCAT
TGTCCTAAGCTGGACAACTATAACTGTTCTTTGGTACAATGTAAGGATCC
TCGTGAGTTCATCAAAGCTGTTGATTACAACATAAGTCAAAAGTTTGTGT
CAGGTGAAGAGGGAAATGCACCTCGTGAAAATATCAACAATACTTATAAA
TTGCTTGTTTGGCATGCACAAAACTGCACCAATAGAGACCAATGCAAGAT
GCCCTTATGCAAAGATTGGGAGTAAGTCAATTCATTTCTGTATTCGTTTC
AGTATCATTTTGCATATTTGCTGTGCTAAAAAGTATGTAAGTAGCAGATC
AGGTACATTGAATAATCTTTTCCTTTAAAAAGCCTACTTCTACTTTGTAT
ATCTGTAAGATAAATCGTCACTATTTCTATTTTAAGTGAATCGTTGAATG
AAGTTTTCAAACAACCATGTGATGAATCTAAAAAACACTATATGGTCATC
CATTCAAACATCCCAGTCTATGCTGTTAAAGATCTTTTGAATGGCAACAG
TCTGAAGACCTTGATTTCTGTTCACATCGACAAAGGAACTTTTGGTAGTG
TCTCTCACTGTTTAGTTCAGGAAGCATCAGGCAGACAATTTTCTACAGCT
GTCAAGAGAATGGGCATCCAAGACCAAAACGTATACATAAACATACTTTT
TTATTATTATATTGTTTTCATTCCTGTGAAGCTTGTATTTGTTATTCAGT
GTTCTACTTCATGACCATATTTCAAATTCAAGTTCGAACTTCATTGTTCT
ATTTTTGCTCTCTCGGTTTAAACCTTTATGTTATCTTTTTAGGTTTCAAG
AATTTTGGCAACATCAGTTCCCATCTTGAAGAAATTTAGTAATTCTCCTC
ATATATTGGTTCCTGACCTCATTACCACTTCGAGTCAAGAAGTGTTGATG
TTCATGCCTAAAGCAGGTTCGAATTTTGCTAAACTTTTGTTTTTGTGTAT
TTGAATGTATGACTAAAGAATGATTTTATGGATGATATGATTTTTTGGCA
AATTAGATTTGATTAGTCTTTTACCCCAGCTTTTGTCTATTTCCTCCCAG
ATGGAGCTTTTTCTTGCTACATTGATTAATAATTGGTCATGTTTCGAAGT
CACCAAAAATCACCCATCAATTAAAAAGTCGCATTTCTTTCACTTCTTTA
GATATCTCATTGATGGATTATCTTAAAAGCTACCAAGACGGAATGCCAGC
AGATGCAGTAGCCTACTATTTCTTCCAAATTGCCAAAGGAGTCAAATCCT
TTCATGCTCAAGACCATGTTCACGGGGACATCAAAATCTCAAACTGTTTA
CTTTTCGATAATGGCAAAACAGTGAAGATTTGTGATTTGGATAGTGTAAA
GGAAGAAAGTGTTAAACAAGCATCTGGATCACGTTATTACGTTGACCCTG
AGGTAAACTTTTGTTTTAAATCAGATGCTGTTTGAGAAAGTGGTGCAATT
TGTAAGTACCAAAGAAAAAGGCATCTGAAGAGCTATTATGATGATATGTC
ATTTTTTATGTGTTTTGTCATTTAAAAATCTATTTATAATCAGAATGATA
AATAACAGGCATTTTAATCCTTGCTAAAATGCATGCGTTGTCTTGGTGAC
GGTTGCCATTCGACTCATCTAAAGAAATCCATTTTTCTCCTCTATTTTTT
AAACTGTTCCCTAGAGAATGTTGATCTAATCCTCTGATGACCCAATTGTC
TACAGTGGACTCTCGTTATTTCCCACTTCTATTAATCGAATCTTTCTTTA
ATTTGAATTCGCCTCCCGTCAAAGGGGCAACCCTGATTAATACTCTCTAT
AATCCAAATCTCTCTTTAATTCGAATTAGAATTCCCATAATTCGAGTTGT
AAGAAATTATAATCTATTTCTGCATTATTGTTCACTATAATAAAGAAACC
AGACGTAAGGTCGGTATTCGAGACTTTCTTTCTTCATTTTATAGGTATTG
AAATCAAGGCATGTACGAAAACCATCAGATGTGTACTCCCTTTGCCAATG
TCTTCCTGTCCTTCTTTTTGGTGGTGACGAAGTCCTAACCAAACACCCTA
ACGATCTTGTGAGTCTTTTACTATACATTTAATCTATCTCTACTTAAAGA
ACTACTTGATCTTAGAATTTTGAGGTCCCGTTGCAAGGATAAATTGTTTT
TTTCAGCAATAGCGCTTCGTCGTGCAAACGTCACTATTATTACTTCTCTC
ATTTTACCGAAATTCAATCCCACAATCCTTTTTGTTTTAATTCAAAAGTC
GTGAAAGTTGTTACTTTGCGTGTAAGCGTAATTAACGCAAAGGTTGACGG
GATTGAATTTCGGTCAAACTGAAAAATCAATGTCTATTTTTAGATTCGCT
ACGGTATGCTATTTTAAATATGTATTATTTACACTCAGTTCTTACTATTG
ACTATCTTCTCTCTCAGTACAATATGATCAAAGCAAAAGATGTTGATCTT
GCAGAGGTATACAGCTTGGGAATCCTTAAACCTACCAACGATCGCATCAC
AGCTTCTATTATTGTGAGCTGGTTTCGAGACAACGTCACTTTGTGTACAC
GACGAAAGAATTTCATCCCTAAGGAATTACACACCGGAATGCTTCCCAAT
CAGAAAAATGTGTGCAAACATGCTCTACAAGGATAGTAAGTAGTAATAGT
TGTCATTTAATTTCTTTCTGTATTTCCCCCATTCTCAAGTTTTCAATGAG
TAAGTAAATCCCCTCGTGAGATTAGATTAGAACTATAATATTTACTCTGA
TTGATATGGCTTGTTTTGTTTGTCTAGACGAAATGTTTAAATGAATTTTC
CCACATACGTACCTCTTGTGATTGATGATCTACTTGATGTTTGTCTCCTT
TTTTAACGAGCTTTCAAAAAATATCGTACGATTTGTTTGTGGTTTTTTTG
TGTTTTTTTTTTTGTATTGATTTTTAACTTTAATTTTCAAAAACACTATC
AATGAAATCATTTTGTCTGATTATACTGGGTGCGCCACAAGAAAGTTTCT
CTCTTTGAAACTGATTTGCTTGAAATCTAAAATTTTTAAAAGAACCATGC
CTATTCCATTGGTAATCGTCAGCCGTGAAAAATTACTCGAATCTGATTGG
TTTAGAGGAGTGCGATTAATCGTTAATTGCACTATTACCACTTTTTGCAC
TCTTCGGCGGGGGGGACACTTTTGTCCCCTTATTCTTTTCTCTCCCAAGT
CCTGTGCCAGAGTCTTTTTTTTACTATATAATAAAAAACAAAGACATTTT
TTAGTCCTCATACTTCAAAAATTCGCTTTGTGTACATAAGTTGCATTGCA
ATTCGAATGTCAAAAACTTTCCCTTTTTCTAAAAAGACTATGATTTACTA
ATGATTATTTACTGACGATTACCTCGGAATCGTATGTTTTGTCGTGCAAT
TAACGAATTTTTAGATTTCGAGAAAATTAGTTTTAAAGAGAAACTTTTTG
TGCCGCACCCGGTACCACTAAAAATTTCAATTATAATGATTTATAGGCCT
TTTTAAAAAAATGGCTTTTAGGGCTTCCAAAAATGTCTCTACATCTATTT
AATAACCTGGAGCTTTCTAAAAACCTGGAGCTTTCTAAATTCTTTTTTCT
TTCCTTAGCTTTTCTTCAGTATTGGATGACTTCCCTAAAGGCTTCCAAAT
GGAATTCTAGACGAAAACGGTGAACCGATTGATCATTTATGTATATAGCT
GGCTGACCGAAATGATCTCATCAGAACCGAGATGTATTTAAGAACTTGAT
TAAAGAGTGTCACTTTGGCTGTGAGAGAACCTTATCGCTGCACCCGGTGC
AAAAGCTACCGTCGAAATATCATTTTTGTAAGAATGTATTCAATGCAGTT
CATGAAGTATCCATAATTCGTTATTGGATGTTGATGTAATACTTGCGTTG
TCCGTTCTATCGTAAAGGATAAAAAGCACTACGTATTTTAAACCTTTTAA
TAATTTTAGTAACATTCTTGATAATTTTAGAGTAATATTGTTTAAGTAGG
CTTGACTGTGTCACATCAAAACCTTTTAAATTAATAAATTTGCATCCCAA
ATCGGAGAAATGATGTGCTATCAACTATTCCATTTCATTTTTTGAGTCTC
GACACGTTTCAGTTATGTTATCTTACATCAGCCATTTCATACTCTGATTT
TTTTAAGAAGATTTTTTACACGTCCCTGAAATTTGCATCTTCAGACAGTC
TTCAGATTTGACTCGTAATATCGTTTGTGGCACTCGCGCCTATCTATGAC
ATAAAGATCTCGGAGCAAAGGACATATCGTGCCTTAATATCGGTATCCTT
TTTCGTATCTTTTCTTATTGTTTGTAATATTTTAGCTTTTAGGAAGTGAA
TTTTAATTTGATTTTAATTTTGTTGTGGTATCAGTTATAAAAAGTGAAGG
TAAATCCTTTTTTTCTGTAATCTTAAAGTCTTAAATCTGTAAATTTCGTC
TGTAATCTTTTTTTTAATAATAACAATGATAATAAANGAATTCTAGACGA
AAACGGTGAACCGATTGATCATTTATGTATATAGCTGGCTGACCGAAATG
ATCTCATCAGAACCGAGATGTATTTAAGAGTGTCACTTTGGCTGTGAGAG
AACCTTATCGCTGCACCCGGTGCAAAAGCTACCGTCGAAATATCATTTTT
GTAAGAATGTATTCAATGCAGTTCATGAAGTATCCATAATTCGTTATTGG
ATGTTGATGTAATACTTGCGTTGTCCGTTCTATCGTAAAGGATAAAAAGC
ACTACGTATTTTAAACCTTTTAATAATTTTAGTAACATTCTTGATAATTT
TAGAGTAATATTGTTTAAGTAGGCTTGACTGTGTCACATCAAAACCTTTT
AAATTAATAAATTTGCATCCCAAATCGGAGAAATGATGTGCTATCAACTA
TTCCATTTCATTTTTTGAGTCTCGACACGTTTCAGTTATGTTATCTTACA
TCAGCCATTTCATACTCTGATTTTTTTAAGAAGATTTTTTACACGTCCCT
GAAATTTGCATCTTCAGACAGTCTTCAGATTTGACTCGTAATATCGTTTG
TGGCACTCGCGCCTATCTATGACATAAAGATCTCGGAGCAAAGGACATAT
CGTGCCTTAATATCGGTATCCTTTTTCGTATCTTTTCTTATTGTTTGTAA
TATTTTAGCTTTTAGGAAGTGAATTTTAATTTGATTTTAATTTTGTTGCG
GTATCAGTTATAAAAAGTGAAGGTAAATCCTTTTTTTCTGTAATCTTAAA
GTCTTAAATCTGTAAATTTCGTCTGTAATCTTTTTTTTAATAATAACAAT
GATAATAAAAATAATAACAACATATTTTGAGTGGCATGCTCCGAAAAATT
CTAAAGCTTTTAGGCAGCTGAAGAATTGTTTCCACAAAGGGGCACTATGA
ACAGAACAAAAACTGGGAAAATCGAACAAAACAGAACGAATTAAATTTAA
GAGTTTTAGCTTTTTTTCGAATTCTACATTAATGTTCAGTTCAATTTACT
TTTTTTAAATAATTTTGTGAAATGAATATTTTTCCCTGGATCCTTTTATA
ATAATTTGAAATTTTGATTATCTACTATCTCCTTGAATATTTCAATTCTT
TCTTTGTATTAGTAATATTTTTTATAGGTCAAATATAATATAAAATATGG
TCAGCAAAATTGATCGGCTCTTTGTTTCTTAGAATTTCTAACGTGAATTG
TTCATCAATTTTACAGACAATCCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021501TCONS_00021501Clytia hemisphaericatranscript
TCONS_00021500TCONS_00021500Clytia hemisphaericatranscript
TCONS_00021499TCONS_00021499Clytia hemisphaericatranscript
TCONS_00021498TCONS_00021498Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021501-proteinTCONS_00021501-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000388supercontigsc0000388:43389..52963 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.86	7.14	6.97	7.02	178.37	135.4	160.49	175.15	142.43	168.95	135.94	150.81	194.65	171.82	118.48	124.01	119.92	132.02	160.89	282.23	152.16	157.09	77.58	98.52	152.82	176.9	223.7	232.49	128.05	115.61