XLOC_012056 (gene) - C. hemisphaerica

Overview
NameXLOC_012056
Unique NameXLOC_012056
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000388:36170..40479-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012056 ID=XLOC_012056|Name=XLOC_012056|organism=Clytia hemisphaerica|type=gene|length=4310bp|location=Sequence derived from alignment at sc0000388:36170..40479- (Clytia hemisphaerica)
GTCGAAATTTTTGTCGAACATTTTTAAATCAGTTGAAATTTAGCAATCCA
ACATAAATTTATCTTATGTGTGGAGCTTTGGTGACATTGACTAGTTTAAA
TATTGTACAGTTTTGTGTGGTTTAAATACTAGATCCAAGATTTCGTTAAG
CAGTACCATTCATGCGCAAAAATGATCAAAACATTGTAAATTTGCTTTAT
GATTAGATACAGTCACGTGATTTATTATTTTGCTTTCCAAAATGATTCTT
AACAATATCCAAGAGAAACGGGTTTCGATCAAAAAGGACCTTAAGAGAAG
CATCTACAAATATTGTATCTCAATACTCGTCAACATGGCTGTAGTCTTCG
GAGGAGGCTTTATTTTCTGGTATATTGAACAATGTTATGACCCACAACTT
GTCCGCAATGACCACCAAACATCAACAGTAATGGACCATAATCATGCGGA
ACTGTGCATACAAATAAAAAATGAAATTTTAAACTCGACTGTGCAAAATC
TGAGCGACACGATCAATAGCCACAACCAAACGCCAACAAACCTTTCTATA
GTCGAACCTGAAGCTGACAGGCTGAGAGAAAAACTTGGAAATCTGACATC
TCAATTTTGCCAAGCATCGTCACCGAAAGTGGTTGAAGATAGAAAAAAAT
GTAGCTTGAATGTGAAAGATATTTCATCTTGGTGGTCTTACACTATGAGT
ATCTGCTTCACTATAGGTAATAATCTAAAGTTCTTCTTTGAGAGTTTTTG
AATTTGAATTTGAATATCTTAATCTTCCGATTTGACCAAGATTCATGTTC
CATATTACACCTCTGTCTCAGCAGTCAACTTAGAAACAAGTTCTTAAGAA
TATGTCGGATGAATAAATTGTTACAAAGTGGACATTCGTTGATGATCATT
TTGATGATGGTCATTTAGAATTATGTTGTCAATGGTGATGATACACTCCC
TTCTCACAGACCCACTGGAACCCCTTTCCAAAATATCGTCCCCAGTGGAA
AATTATCCTCCTATTTTTGTCCCCACTGAAAATAATCAAATAACAGAATA
AATCAATCCTCAATGCCAAATATTATGCTATTTCTCCCATCCCCGCTGAA
TTTTCTGACTTGAAAACAAAAGAATTGAAATCCCCAGCCATAAAAAGTAA
GGGAATATCAATCCCCATCGAGTTTCAGCCGTTATTTTTATCCTCACTGG
CTGAAAAAATCCTACCGGGTCTTTGAGAAGGGGGTGTAATGATACTTACT
ACAGTTGAGTATCGATAACTAACACGCACATGGAACACAAATTTGTTCGA
GTTAAAAGGAAATGTCGAGTTATAGAGTAAGGTTTATAAAGTATTGTTAA
GTGAAGAAACTAGAGTGCGAGTTAAGAAGACATTCGTTAAGGAGACATTT
GAGTTATTAAGGTTCGAGTTAAAGAGACTCTATATACTGTTATCATAATT
TAGGAAGGTATTGGAGTTAAGTGTGTGGAATTCAATGAGAGTGAGGCTTA
CCGTGAAAAGCACAGCTCAAAATCATATATTTACGCTGTGCCGACGAATC
GAGATTCTATTCATCGCGCAATCAGCGAAGACAAAAGTAACCANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGATTAGATTGACA
CATGCGCGATAAAGTTTCTATTATTTGTCTTCAGAGGTTAATATATTCTT
TGAAAACTTAACCTCTGATACTCAGGGTAAGTGAGGCTAGGATAAAATTC
TTTCTTTTTATTGACAGGTTATGGACACATGGTTTGCCAATCAGCGCCCG
GCAAAATCGTCACAATGCTTTACGCCCTTATTGGTATTCCAATAACAACT
ATGGCTTTATATCACGCTTCGAATATCGTTCTATCCTTTATACAGCTTCT
CATCATTTTCATTGAGAATCGATTGTTAAAACGTCAAAAAATCACACGGT
ACAAACGCAAAATTTTCATTGCTCAAATTCTAATTTTCATAGCTTCATTT
TCATTTCAAAGTTTAACTATTGTGCCTTTTGTGATTGACGCTAATGGAGA
ACCAGTCACTGATTGGCTATCACTGATCTACTTTAACTTTGTGACCTTCT
CAACTATCGGGTTTGGTGATTACAACATGGATTATGAGAAATTCTATGAA
GCTGATACAGTCAAAGAAAATCCAGAATACCCGTTATTGTATGTGGTGAA
TTCAATCAATTTTTATGTTTTGATGGGCTTAATGGCAAGCCTTTTGAACT
TCCTGGCGAGCTGCGATGAATCACGGGAAAGTAAAACAAAAGAAGCTCAA
ATAATTGAAGAACAATAAGTTTAAACTAAAACTGTATCGAGCTCAGTGAG
TCATATACCAAGGTTGGAGATGATTCCTATGCCTTAAAATTTGCGCTACA
TTTGACAATTTTAAGATTTTCTTTACTTTTGCATTGAATATTTCAAAATG
GGAATATGTTACTTTCAATCTAGTGTTTGTGTTCGAATCTAAGCGGCCCT
CAAAACTTATGTAGAAAATATGTGGCTTCAAATACTATGATCTTTCATCA
ACGATAACGAGATTGAATTATCNGCCCTCACAACTTATGTAGAAAATATG
TGGCTTGGTCAAATACTATGATCTTTCATCAACGATAACGAAATTGAATT
GTTCAGTCTGAAGAAGAGGGTGACTCAAAAATAGCAACCACAGCATCCAT
GGAAAGATGTTATGATCTCTTTTAATCCAATACAAGTGAAATCCTATTTT
TCTTTACAGTTCAGGAAGCAAAGAATTCTTTATTGAAAACACAAACTAAT
ACACACGGACTCTAAGGGTACAACGATAAAATTCTCGAGAAACTCATACG
TTGATCTTAATCATGAGACTCCTTTTCGTTTCGGACCTACTTTTTACTGA
CCTTCATTTCCATTAGAGCACTGGTCGCACTATCTGTAATATCCGATCTT
TTCTTTCGTCGCTTGCGTTTCAAATCTCGCTCTTCGTGCTCCACTTTCCA
TTCGGCAAAATTGATATTGGTTACAAGAACATACTCGAAAAGTACGCCCA
AGATGAAACAAAACGAAATCATGAAATAAATATCGATGGCTTTGACATAA
CTGACTTTTGGTATCTTCTTATTAGCTGATAACCAAATCATAGTGAGGGT
TAGTAGAGTGGTCGTACCAAGGCCTAGAAAATGACCAGATATTAATTGTC
TCCACTATAATTTACAAGAACATCGTAAGAGCATTTAACTCTAAAAATCT
CAAAAAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021497TCONS_00021497Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021497-proteinTCONS_00021497-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000388supercontigsc0000388:36170..40479 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21	0.09	0.31	0.53	0	0	0.43	0.34	0.48	0.19	0.18	0.28	0.84	0.6	0.14	0.11	0.32	0.16	2.3	2.68	0.35	0.19	0.36	0.53	0.42	0.57	0.1	0	0.04	0