XLOC_011953 (gene) - C. hemisphaerica

Overview
NameXLOC_011953
Unique NameXLOC_011953
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000385:259450..269746+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011953 ID=XLOC_011953|Name=XLOC_011953|organism=Clytia hemisphaerica|type=gene|length=10297bp|location=Sequence derived from alignment at sc0000385:259450..269746+ (Clytia hemisphaerica)
GGGAAGTTCCCCATCGCAAttagaattccaagaatttcgGCGAATTTCCG TCTGAAAATTTTTCCACAGCAAATCtaccatttttgaaaagtgacGTAAC TAAACAAGATAAACATTCCAAATCGCATGCACTTTCGCTTGTAAACATTG TCTGCTGCAGAAAGTCGAGGAAGTTCAACCTGCCAACCTGATTCAACaaa agataaaaagtaaagGTTTGAAGTGCTCTAActcaatatgcttagcaaaG CTTCATCTAGCCTTGGAAAATCATTGTTGTCTCTTTCTCGTAGCAACAAC TTATTGCCCAGAGTTTGCACTGCCTCTTTTCATTATGGAAATGCACTTCA ACAAAAGCGAGCTGCTCTTTTAGATATTGACAATATCAACCCTCATGTAA AAGCTGTGGAATATGCTGTCAGGGGACCCATTGTAATCAGAGCTTCAGAA ATTGAACAAGAATTAGCAAATGTAAGTATGGGTCTTCTTTCAGCATCTCA TGTAAAGGCACTGGTTTTTTGTCCAGTGTGGAAATGATGCAAAGTCCACG CCAAATTGTTATTTGTTTAAACTGAGGTCTACGCCAAAAAAAGGTCCGCT AGCAGGGGGTTTCAGGGAAGCGCTGTAAGCCCCCTAAACAGGTCCAGGGC TGAGCCCTGGGATATTTTTAAGGTGGGTAAATACaggtaaatatgctgaa aaactgctgactcagcaaaaaatatcgataattttcaatatttaaaccaa aatatctcgagatctagacatcaaaagttgacaaaccataccatttttgg atactactaattcagggctatccagctgtgggaatgattttttctgaaNC TGACAAatcataccatttttggatactactaattcagggctatccagctg tgggaatgattttttctgaaaatccctctaggaaaatgctgacgtcatca gaaaacgccaaaaacgttgatttttcgccttaaaaatgtcatttctcggc accaggtggtcgaaacttaacaaataaccccattttctttatctactttt cacgctgaaNNCCtctgatatttgattttcagacttcgaaaaaaccgtta gtaaaggggggacccttgataagttctatcgatgaactaaaaatcgattc acttgaaaactgcaggagattcgaagggcaaattttttttgtcaattcta caccctatgaggagcataatatcaaaaatttgccctgatctaaggggtga cctacaaaaaccatttttaaggccttctGAATCTTGGACGCTGGTCTAAT ATGGTTAGGTTATTAGATTAGATTTCTTATTACAAGTTTTGTTGCGAcag aaaaaactttcatttacTCTCTCCAACAATCAAGTGTACAGACTGAGTGT CTTTTATCAGAATGAAGGCGGCCTTGTACAGGCCATTCTTCATGCCCTTT AAGCGTCCggttatcggacgctgcccctcctgaaattaCTAATATATTGG TAAAAACTGCCTTTTTAGTGGAACAACACCttaaaaagtgccctttttgg ccaccaacggacgctgctgtgcctttctaaaatatggcctgttGTATGTT GTCGCAAAACATTTGACTTCATGAAaagattcaaattttgaaagatgtgG GAGTAAAAAAGGAGGGATAGATGTTTTGACGAATGggacagtcttttgaa taactaattactccacatacattacttttcctcagccaataaaaacatga taaattatcttgtctctaggtaactgctgtggagtaattagctattcaaa agactgtcgcGTTTTCCAAAACAACTAATAATTGacactttgaaagaaaa aaatggaaagaCTAGTCTTATCTTAGACTACTCTTAAAAATTCATCTTCC TATTTTCAAAGGATTTAAAACTATCCGACAATTACTGGAGGTGGCTCAAA ACATGAACTTtaatacagtcaaaaaaaacatatagcCAGGATAGTCCATA TAGCTTATTATATTAATCTTTCTCTAATATTTTCACCAGTCATATTCTCC AAAGTGGAGATAGTCAAAAGTTTCTGACTATTACAAAGGAAATATTAAGA CCTTTTGTAGGGCacaatgtcatgttgaataattaaatacTCCATCATCA CAACAATAGGCTTCAACTTACAGCATTAATGCAGCATAATATTTGTGATG TTggcatttttaggcttacacAAATAAATGTATAGAAATAGGAATTGCTT GTCCTctagtagcctggatatccagaccgtaaactatttcaccgtctagt ttttttataatcttgtctctggtttacggtctggtcgaagtaactcgtct gcagggatatctgtccctgcatcgAGTGTCTCttattggtcagtacgcgc ccagtcactgagcagaattttcgcggggtttttgatatttttcgatgcgc gcgcataatttatggaaaaagctgacNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNggaaaaagctgaccttgcaaaaaaagataaacaaatgaaaa agaaaacacaagttcatttctaaacaaaatggccgctggaaaggagcctt tatgaatgCGGCTGATGCTTTGATGTACTTTAAagtggttttgaaagttt attgagtttgtaaaagaggttttatggtaagtaattatgtgtgtctgcct ctgggtttccaaagttttgagattctgtcaacaagggtttactcacagac tgtgtcattcaaaactgtatcagacttttttagttgcaccagactctaaa attttagaaactttgtatgttgaggtaagagtttttttttctgaaatttt gagtctggatacccaggctagtcCTCTAGGCAACAGCTGTCTTGTAAAAG GTTATGCCTTAGGTATGAAAAATACTGGTGAACCTCTTTTATCAAGGATG AGGAATATTTTTTCGTGTCTATAACACAAAAATTAGTTCAGCAAAATTAA aggaaaatgattatttcttcttaaaatgttcttaaacttttacaaaaaag taaatCACAGAATTGCAAGAGTACTATATATGgctaaactttctcattcc ctTGGAAACATTCTTTGTGCTTTTATGGGATGTTTTTACTGTGGGATCTT TCCCAAATCATACCAAATTATATTTTTCCGCTGCATACAACTGCATGGAT AATAAATAAGGACCTTGAGACTGACTGGAAAGTCTAGTCAAGAATGAGAA AGTGTGGCCATTGTACTGTAATATGtcagtatttaaaaaaactggtttaa ctatttttttaaatctactgTAGACACATTTTACTAAAATCTGAAATCAT TTTGTAAAACTGTTTTGGGCTAATATATTTGTGCTGAAAACTTTACATGA TTCAATAACCCCCTGTTTTACGTTTTAGGAGGGTCAAGGTGATAAACAAT TTTCGCAAGTCATAAAAGCAAATATTGGTGATTGCCATGCCATGGGACAG CAGCCAATCACTTTCATCAGACAGGTTTGTATCCTTTACTGTGAACACCA GCAATGGAAGGTCCCAGCTGTAATTTTGTTGCTCCATTCATTCAGATTta tcataatttcaattttgcgttgtttatgtttctttgatCATCATGGCGAT ACTCCTCGAGCATTGTCAAGTCAAAGCTGGTCTTTgattctcaataactt ttcaattaaattaaatcCTCACATTAAGCTACGAGTTGTACAGAACACAT GCTTTCCTATAACCTTACAGGTTGTTGCTGCTTGCACATACCCACCATTG ATGGAACAAAATGTTTTCCCAGATGATGTAAATGCACGTGCAAATGAAAT CTTGTCAACTATTCGTGGAAGCACAGGATGTTACAGTGATTCTGTTGGTA TGGCCATTGTCCGCAAACATATTGCAGAGTACATTGAGAAGAGAGATGGT TATCCATGTAATATCAAAGATGTTATTGTCACCAATGGAGCCAGCTCTGC TGTTAAGGTttgttctgttttgttttttatatactGAAAGATAATTGTTT TGAAGTTAATAATGACTAGTTAACTTTGAAGTCTATCTTGTACGTTTGTT TTGAtcactaaaataaaatgtaatttctagtattttttctctaattttaa atacagttggcgctctctaattcgacgttctactattcgataggctccct tattcgatgaaatttaaagtccccatcaacaagaaactctcataaacgac gctccctttttcgataagctcccttattcgatgaaaatccaaattccctt gaagatcgaattagagagcgtcaactgtatttaaaattagagaaaaaaat actagaaattacattttattactAAATATGCAAGGTTAAGCTACATTATT CACccaacaatataatttctaattTCTAATTTCTAATGACAGGAAAactt ttaagaattttgaaTCTAATTACTCTGCTATTTCCATTTTCTTTGCAGCT TATCTTGGAGTTGTTTATATCAGACAAAGAGACATCAGGAGCCATGATCC CTATTCCACAATACCCTTTGTATTCGGCCACCATTGCTGAATATGGCATG GGACTGGTAAgatctttttagaaatattcaCTCGGTGCATTTCCTTTATC TTTAAATAATACCTCTGAATTGGAAAGACAAACTTTTAAAGTGTGCTGTA CCTCTTCTACCCAAAGTTTTAAACTCGTTTGAGTCATTTTTCAATATCTT TCCAACTTCTATTTCCTAATCAAATTCGGGAGTGTTTTTTATACTGTACA AATAGGCACTTCCAGAGGAAATATCGTGTTTTCTATTTTTGGAGGAACGT TTTAAAAAATGCAGAACTTATTCAAGAAAGTGTgtaggaaatattttttt ttactcgTAGATCGGTTATTATTTGAACGAGGAGAATAAATGGGGGATGG ACATCGAGGAGTTGCAAAGATCTTTGAATGAAGCACGCAAAACTTGTACA CCTCGAGTACTCTGTGTCATCAATCCTGGAAACCCTACTGGTCAAGTATT ACCCTACGATAACATAAGAGACATTATCCGCTTTGCAATGGAGGAGAATC TTTTCTTGTTAGCAGATGAAGTTTACCAAGACAATATTTATGGTGAAGGA TGCGAATTTAACTCTTTCAAGAAGGTTTTGATGGATATGGGAGAAGAAGC TGAAGGCTTTCAATTGGCTTCGTTTCATTCATGCTCGAAAGGATTCATGG GAGAGTGAGTGATTTTCTGAATATTCAAGATATTGTTTCCTCTTGAAAAA TCGATGAATGTCTTGTCGCttcctttcaataaaataaTCTACCTCCTTTA ACCAAAAGTGATTCTACAGAAAACCTATGATTTCTTTACGCAAGTGTTAT GTTTTCTAGTAAAGGATTCATGGGAGAGTGAGTGGTTTTCTGAATATTCA AGATATTGTTTCTTCTGGAATCTTGCTAGtacttttcgataaaattttta ACCAAAAGTGCGTCTCGTAATGCTAAACAAGTGCTCGAGTTCTAGTAACC TCGCAATTGTATTCTTGTCCCTTGTCGAATCTTTCTTTTCTAACTTATCT ATTCTATGCTGAACTAACTCACTTTTCCAGATGTGGTTTACGCGGCGGAT ACTTAGAAGTGATCAACCTTGATGACGAAGTACATTACCAACTGAACAAA TTACAATCAGCCAACCTTGGATCCAACGTCACTGGTCAGATTGTTATGGA TTGTATTGTCAACCCACCCAAAGAAGGAGACACTTCATATGAACTCTTCC AAAAGGTGATCTTCTTGTCTTGGTTTTGGATTAAAAAATGCGACAGTAGC CGGGACAAGTTCTCTCAACAGTAGTTTTCGTAGAATTTTTGCTACTGGCC AAAAATAAGCTACCTTAAATGtaactttgaaaaaagttctttttataTTG TGTTAGAACAATCATTGTGATAGTGATTCACAAGAATTCCTTGAAAGTct tgaaaaaaatctgattgTGAGCTCCTTTGGTCAAAAATTTATTTGTGCTT TTTTTCACATAGTATATAAATTGCAAATAGTATCTCATAAAGAGATCGTA TACATCTAACATGCGAGAAAAGAAAAACGGTAAAAACGAAATCGATTTTC GAAATTCTAGTGTGACTTTTTATGTGCTCAACAACACTttgctttcaaaa aatttctcaacgTTCTATTTTCAATCTTCCGGTTTTTCCGTAAAATGCCG GAAAACTgaatatttaaaaaggtttttgcTCCGGTAACGTATTTGTTGAG TCAAACTTGAAACTAAAAACCCCTATTCTAAGTTAGCAGAGATTATACCA CAATGCATTTCAAAAGCCTTTATCTAAGTTAGTAGACACGCACAAACCTC AAAACCACACTAACCACAAACAGTAACTGCTAACTGAAAACTTAAATCGT AAACGTTCAAAAGTATAGAGATAAGTAAAAGGTTGTGttaatttttctaa aggctTAACGCTTTCGTTACCAAAATCTTACCATgcctttttatttgcaa aactGCAGTGACATCCACTCGCCTGCGCACTCTCAGTGATTTTAAAAGAA CTAAAGAAAAGGCGCCTTTTAGAATTGTTTGCAATAAAAATGAGCTGTGA TGTGAAGGGCCTGGGGAAAGGTCATGTTTTCATAGTATTGAATATCCGTC AATTCGGTTTCATTAAACTGTCAAAAGAACTCAATTTGATGGAGACGAGA CGAGACCTGATTTACCTTTTTTTCGAAACTAATTTCTGGAGAGAGTCAAA TTTTATGTGAAATCTGATGACATTCACTTTGTTACAAAATCACAGAATCC GATGCGTTGACCTTTTGGcgaaaatgtcaaaatgctTTTCGGCTTGTCGC ACGCAAGTTGAATTTAATTGTGGGCGCACCACTAAGCTTGAAAAATGTGG TATTTTTAAAAGTCGGTGTAAAAGTCTCTTTATCTCGAACCTTTATAACA CGAATACATCCTTACCTCGAATATCTTCTTAACTTGAACAATTTATATGG TCCCCTCAGTCAAAAATGCCTTTAAAACGGGTATATACGAGTTATGGAGA CCCCACTATACATTTGAACCGTGTAAAAATGGTTATTTGTTACTTTGAAT AACACATGCCTTAGGTACAAAGCTATAAAAGccgaaaaaaattctcaata tcACAATCACTCTTGTTTCTGGAACCAAATAACAGTTTTTACGAATCAAG TACAAGCTTTTATGAATCAAGTATAAGCTTTTACGAATCAAGTATAAGCT TTTACGAATCAAGTACAAGCTTTTACGAATCAAGTACAAGCTTTTACGAA TCAAGTACAAGTTTTTACGAATCAAGTACAAGTTTTTACGAATCAAGCAC AAGATTTTACGAATCAAGTACAAACTTTTACGAATTATCAAGCACAAGAT TTTACGAATCAAGTACAAGCTTTTACGAATCAAGTACAAGCTTTTGCGAA TCAAGCACAAGATTTTACGAATCAAGTACAAACTTTTACGAATCAAGCAC AAGATTTTACGAATCAAGTACAAACTTTTACGAATCAAGTACAAACTTTA ACGAATCAAGCACAAGATTTTACGAATCAAGTACAAACTTTTACGAATCA AGTACAAACTTTAACGAATCAAGCACAAGCTTTTACGAATCAAGTACAAA CTTTTACGAATCAAGTACAATATTTTATGAATCAAGTACAAGATTTTACC GAATCAAGCACAAGATTTTACGAATCAAGTACAAGCTTTTACGAATCAAG TACAAACTTTTACGAATCAAGTACAAGATTTTATGAATCAAGTACAATAT TTTATGAATCAAGTACAAACTTTTACGAATCAAGTACAATATTTTATGAA TTAAGTACAAGCTTTTACCGAATCAAGTACAAGATTTTACGAATCAAGTA CAAGATTTTACGAATCAAGCACAAGATTTTACGAATCAAGCACAAGATTT TACGAATCAAGTACAAGCTTTTACGAATCAAGTACAAGATTTAACGAATC AAGTACAAGATTTAACGAATCAAGTACAAGCTTTAACGAATCAAGTACAA GCTTTTACCGAATCAAGTATAAGCTTTTACGAATCAAGCACAAGCTTTTA CCGAATCAAGTACAAGTTTTTACGAATCAAGtacaaaattttactttttt tcacaaCAGGAAAAGAACGATGTGTTGGAATCGTTAAAAACACGAGCGAA ATTGGTCCACAAGCGATTGAACTCTATCGAAGGGATCACATGTAATGAAG TGATGGGTGCCATGTATGCTTTCCCAAGAATCCATCTCCCACCTAAAGCT GTTGCTAAAGCAAAGGTAAGATGGTTCATTAACGGTTGAAATTGTCTTGA CTTTCCCCTTGGATGATATTGGAAAATACTCATCTGACCATCacgatttt tataaaaacatccaaagatttttAAGCCTTTGGATGTCCTGAACTAttcg agttttaagccttaaaaggTTATTTTAAAGTACTCCTATTcttaccattt tgtgaataattgTGCTCGATTTCATAAGAGATtaggtgttttcgagtccg cgaagctttaaaatgctgtcaacttgttttaacattttggccatcgaagc ctcatgttcctatatagctttttctagtttttttcttattctttaTATCA GCAAGAACTTACTGGTCATGGAAGCTAGGTCAAACACACTCGTAAGGTGA AATCTCAACCCCAACCTTACTGTTTCCTAACCAATTTACTGACACAGAGG TGTAAATAGAACTAGTCAATAAACACCTGAGTGTCAATCATCTCACGTTT TCGTTCATTTTGTTTGTTACAGTCACTGGGTCAAGAACCGGATTTCTTTT ATTGTTTACAATTGTTGGAAGAAACCGGACTATGCGTTGTTCCGGGAAGC GGTTTCGTTCAAAAGCCGGACACTTATCATTTCAGGTATGAGTCGTTTGT TGCGTTGCGTTTTGTTTTTCACCTTGCCCTTTTAAAGTTAGTGACGAATC ATTAAGTGTGGGTTTATGTTGTggtatattttttttatctactttttaTA TCGATTTTCGAACATAAGGAATATGTATTTCCTATGAATCATACAACTCT GTAATTTATAAACACCGATGGGGATGAAGTTATTGTCATGTCTTTAAAAC GTCGTTAGTAATATCTGACTTATTCACATTTTTTATAGAATGACGATCTT ACCCCCTGAAAACGAAATCGAAACATTTTTGGAACTTCTGGAAGGTTTCC ACAATCGTTTCTTGGCAGAATATAAAGACTAGAGAAATGTTTGGAAAGTT GGGAAGAAGGGCGAATTTAATAGTATGAATAGAATGAATTGTTGGCTTGT ATTCTTGCAGCAAAACgattgaaaactttttaaaagattgaaagaagaag GCAAAAACCTCCCTTAGAGTTGATTGGCGTTTTTATATAAGAAGGCAGTT TCCTTTTCTAGAACTGATATTGTGAACCGCAAAACCTGCGGTAGAATCCT ATCTTTATCTAACATGTTTTTCGTTAAGTTAATCTGCTTAGCCTCCCTTT TAACGAGCGTGCGGTATTAATTCGAAATGATTATTTGAGATTTGGCTTTT CAGAAATTCATTCAAACGTCATTCcatgattttcaaaatctttttaaact TATTTCCAGCCAAAAAACATCAGCCCTGTCCCCGTGTCACGAGCTTCGGC TCCTGCATGAAAGGTCTAAAGGCCTTacaaaaaaatagaatttaGTATAT TGTTATCTTATTtatatttacattttctttATATTGTATGCACTCTTTag attgattttaaatttttcagtaaATCATTTTTTTGTTGTATTGCTCAGTT GTATCTACCCATGAAGATTTTTACTCTGGAGAATAGGGAAAATAGCGCTT GGAAATGATGAAATACTTTGTGGTAAATGTAGTTTGACCTTCGTCAAAGT GACAAGAGCGCCAGtgctttattttttaaattcttcattttggccaattt ttacaGATATATTACTGTGTcatattttatatcaaaatgttaaaaatata aatagatttttttaacATGGCTTGTCCattgaaaaatagaaagaatATGA TTAAAATATTGTATAGTTTTATTTTGAGGATCTTGACCTCATTGCTGTTA TAGTTGTGTTGACTTTGGAGAAAAACAAGGACAAGGTACATTTTGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021342TCONS_00021342Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021342-proteinTCONS_00021342-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:259450..269746 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GPTalanine aminotransferase 1 Homo Sapiens
GPT2alanine aminotransferase 2 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.04 29.61 33.2 30.8 29.8 24.06 43.53 48.78 56.05 61.31 75.63 56.87 73.65 70.13 56.7 76.64 100.68 115.32 49.96 53.89 102.06 106.99 58.36 62.86 65.53 67.32 71.3 65.77 17.31 18.95