XLOC_011904 (gene) - C. hemisphaerica

Overview
NameXLOC_011904
Unique NameXLOC_011904
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000380:184711..189321-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011904 ID=XLOC_011904|Name=XLOC_011904|organism=Clytia hemisphaerica|type=gene|length=4611bp|location=Sequence derived from alignment at sc0000380:184711..189321- (Clytia hemisphaerica)
GAATTAATTAAAAGTCAATGATGTCACTCTGCATGATATAAGATGATGCT GTTTATTAAATTGCTTAAGTATTATAGTGACGAGATATAGCACCAAAGAG AGACGGAGTGCAAAATCGTCAACGAATACTTTTGACAACAAATAAACATG TCTCGTGATTTAAACTGACAGTGCAATCAATAAGAAATTTTCAAAGAGGT TTCAAACAAGCTTAAACAAGAAAGGTTCGAGCAAGGAAGTAAAAAGCTTG TGTTTTTATTGCCCTCAATTTACAAGTGAGATTTAATCTTTCGACGAATA AGATGTTGTTGGAAGCTCTCTTCATTACGACAAGTAAGATGTTGGTTCTC TTACTACTTTGCAACTATATGTCCTAGTACTATCATTATTCAACTTTTGT TTTTTTTCTTCTACACTGCATTGTCCAACCTCGTCCCCGTGTATCCCAGG CTTTATTTACATTACTGATTGACGCCAGAGAATTATATCATGAACATATA AACGACTGGACATCTACCTTTTATTGTCTCTTTGAAGCGAGCTTCGTTGC CGCCTGTATTTCAAAATTGGTATGAAAAATCCGACAATATTCCGTCATAA TTTTATTTCTTTGAATTATTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGTTTCATTTTATGCTTTTAACGAGGCGGCAACG AAGCTAGCAGCCCTTTCTACAAAAAGACAAAGGAGATGGATGTCCAGTCG TTTATATGTTCATGATTATATCTAGCGCAGTAACACCATCAAAAAGCTGA TAAATACGCAGGGAACGACGAGGTTGTGCATTGTCCTCATATATAAATTA CGGACTTTCCTAATAAGATGTTACATTTTCATTGTGATCTAGAACAGCCC CAATATCTCTCAGCAATATAGACTGGTTTTCTAGCTACATTTTTTCACAT GTTTGTGTATATGTGTTGAACGAATTCTTTCAATTTCAATGTATGTACCT CAAAAAACTAAACATGGCAAATAAAAAATTCCCAAACATACTAAACTCCA ACCGTGATTTATCTGTTTCTTTCAATGTATTTTAGTTGTCAGTGCTCAGG GTGGTGTATTCGTTCGAAAGGAGGCTGACCTCTGGGTATATCGTGGATAT GGTCCAGCATGCTCTGAGGGAATCAACAAAATACGAGCAGCTTTTGGTGA CGAAAACCTCACATGGGATGATGAACTGTCATTAGAAGCTGAGAACTGGG CACTAACGCAAGCCATCAATTCTCCTAATGATGATTCTAAACATGCAGAT ACAAAGAACGGTGAAAATACATTTCAAGCTTGGTATTCCACCGTAGAACA ATTTATTGACGCCATCACTTGTGACTATCCTTTATGGGCGTGGTACCAGT AAGTCAACACTCTACCCTACACTTTTACCTGACCCTTAAGTCACTGATAA TAAATCGATCCAAAGAATTTTCTCTAAAGTCTGTCCAGATATAATTGGCA GTGGAAACAAGAACGCCTGTAACTTTTGATAGTCAAATATAATTATGGAA TTTTTTTTTGCTTGTTTCAGAGAATCAAAAGCGCTATATTTGAATGTATT TTTGGTTGAAAAATTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNGAAAAATTCGCGATTTTTAGCGGTTAAA TTTGCGATTGCAAAAATTTAGCTTTTTTTCTACTTATGCTATAACGTTCA TTTTTACACCAGTAGTAGTTCAACCTTAGGTTAAGAAGTTTTTTAAATTT CAAGGCGAACAAAAAAGTCCTTCGGAAGATACGGGACCCGAAATACCCCT TGGTAGCACTTTTCTGTGAAATATCAAATCTCCAACTTATTACTGGCAAA CTCGAACGGAACACTAAGTGGTGCCAGTGGCTCTGGGTACAAGATCTCCC TTGCTGGTTGAAGATACTAAATGAGTCTTCGGAACATCCAGCATCCAGGG ATGTCTTGTGCAAAGAATCTGTATGGTAGTTTAAATCCTTGGCTAGAAAT TGGGTTAATTTCCTGTAGCGATTTAACGAGACAGTAAATGTCCATACAAC TTTATTAAAGTTAATGACAGATTCGATGGTGGAAATAATTTTTATTCACA ATTTAGGGAGCGTGACCCAAAGAAGCCATCAAAAGGCTTGATCAATCAAC TAGTTGGTGAAAAAGTGAAGAAATATGGGATGGGCATGGTCGTCAACACT GCAAAGAAAGTTGTGTATTTTGTCGGCCATTTTGATTACAACATGCCAAT CGATCGAAAGATTTGGGATGACTATCTCAGCAAAAAGGAAAAATGGGGTA AAAATCATTTTACAAATATTACGCGTTTGATTTATAGGAACGTTTATAAT TTTTGAAACCTTCGGATGTTCAGAATGTTCGAATTTTCAAAGTATGGCAC TCCCTATATTCAGTATACCTAAACGTTAGATTTGTGGGGCTCGATAAGCT GAACATATTTATGCATCATTGAAAAGGAGTTTTTCAAGAGTATTTTTAAA CCTTGTATCCTACCTTTTGTATTCTAGTTATTCCGAGCAGAGATCGTTTG AAGAGTAAAAAAGGTTCACTGACTCCGTCTTGTCGTGATTATAAACGAAA CATTATACCGTGCAAATCTTCCTTCAGAAGAACACGATACCACCAGGATG AGGAGAGGTAGGAATAACCTATTCTCACACCCCTGTCTCACAGTTATCCA GTCAAAACCTTTTGGCCAGGAAGAAAAAGAAAATTAAGAAATATTGCATT TCGATCAACTCAGGGGGAGAGAACTTCAGTGTGTCTCATTATTCTTTTAT AGTAGAATTGCAATTGAAATTCTTAACTTTGCAAGTTCTAAGCCTTAAAA TGTTCTTGTTTTTAATAATTTAGCCATCAAAGCCTTGTTCTTATATAGAT TGTTCTTATAAGAAACTTGTGTTGATGAAATTCACCTTTCTATCTTCATT TTTAGGCATGTCATTGTTATTGAACCAAAAAGTTTCCCAATCGTTCTCTA AATCATACACCATAGCTCAGTATGTCAACGTTATTTTTGGTATCGAGTGC AATTTTTCTCATCTTTGCTGATTTTGACAGTACACTTTGGCAAGCTTGAA AAATATACCCATAAAGATAGCGTTACCTTTATCTTTCAAAATTTAATAAT GAAAATTATTAGCTCGAAAATTAGTATGTATAATTTTTCTTTCTAAAATT ATTTTGTAAATTTATTGTCTAGATTTTAGTTTTAGAGTGAAAGTAAAACT AACGAAATTATCTCCTGATTTTTATTGGAGACTACAGTATCTATGAAATT TTCTCTAAGTGATTATTTTAATCCCTCGCGGATAATTTTTGGAAATGTTT TTTACTACTGTCTTAAAATAGGTTTAGAATGGTGATAAAGATAATAAAAA GTCATCAAAAGGTCTTAGCTTCGATACGTCAATCGGTTTTGGTTGTTTAC CCAACGAACAGGTCATTGTTGATTTAACGTAAGGTTTAGGAAGCTGACAA AAATAAAAAGCAAGTCCGACTTTTTTTGTCTTTCAGAGTGTTATTATCAA GTTACGTTTACAAAAAAGTCACAACGGTAGAAAACTTAATCATTTGAGCT TATTGATTTTGTAAACAAAGTCATAGATTCATTGTCAATTCAAATGAAAA TATCATCGCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021272TCONS_00021272Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021272-proteinTCONS_00021272-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000380supercontigsc0000380:184711..189321 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32 0.21 0.11 0.21 0.29 0.34 2.84 3.12 20.81 13.46 51.93 17.27 34.88 40.3 65.38 57.75 24.74 35.11 88.64 80.57 21.37 19.68 24.51 26.57 22.22 20.04 13.62 10.67 106.59 96.49