XLOC_011901 (gene) - C. hemisphaerica

Overview
NameXLOC_011901
Unique NameXLOC_011901
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000380:294856..298684+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011901 ID=XLOC_011901|Name=XLOC_011901|organism=Clytia hemisphaerica|type=gene|length=3829bp|location=Sequence derived from alignment at sc0000380:294856..298684+ (Clytia hemisphaerica)
TTGGGTACCTCTGAAATCTGTGGAAATCTTCCCTCAAACTCTGTAAGTAT TCTTCCCTCTCAGCTGAGTTGAATGTATTGGATTAAATACTTGGACAACC TAATTATTCAAACTCATTctcaataaaataaaactttaggTGTTTACTgt aattagaaaaaataagatttgatcAGAATCTTAACGATGGAAGCAATATC AGAATTCTACAAATGGGCTGAATCGATCAGTGGTAAGTTCAGGGAAAGAT AACGGTGTTAATAATAATAGTATAGAGAcattatttctttaaatctaTCA ATAACTTATTTTTGTTCCAAAGCTTTAATCAGGGTAAATACCATAACTAC GTGTGATGCtgacataccttgtctaattctatcatagcaactatctggtc tttaaactgtttataaataaaacctTCTAAATAAGCTGGtttaaaaaatt agttttaCTACTTGTAActactttgcagaccagatagttgctatggcGAA ATTATTTATACTGTTTTCTTTATGATTTCTTTTAGATCCAAGAGTTGCAG ATTGGTTTCTTATACCCAGTCCCCTTCCAACTTATTCGATGTCTTTTTTC TACGTAATATTTTCATGGAAGATTGGTCCATATCTTATGCACAACAGAGA ACCcttcaatttgaaatatttgctgatCATTTATAATTTATCAATGGTTT ACTTgaattatcatattttcaaggaGGTTGGTACTATGTGTTCACAAATT GAAAATCAAGATAGACTAGTATATATCTATCCTCATAAGAATCATTTACA ACTAAGAGTAACACTTTATTTTGACTGTAGAATCCTCACTCTTTGATCAT CAAAAGTAGCTTTTTTCAAATGCATCCATTcggaaaattaaaattaaaat tttagctAAAGTTTTTAGGAAAAGTGCTGAAAAGTGTTAAAATCATGATA TTGAAATTTCTATTTAAAAGCTCTTATTTGGAATGCTGGAAGCTGGTTAT TCATACCCATGTCAACCCTTCCTAACTTCTACAAGACCTGTCGATTTCAG GGTAAGCTTTGTTTGTGAAATGAATCTGGAATGAACCGTTTGCTTGATCt gctcttttgaaaaaaaatatgcgTCTGCCAAGATTTTGACATGTCAGCAT TTATAAATTGTATTATATAAAGCTTTTGTTGAACTTTCAATTATATGTTT TAAAATAAGAGCCACAATTTATTGATCATTTCTAAACGGAATAGACACAG AGATGTGAATTGTGAATTATGTTATATCCACCTTTTGAGCTTTTATCATA AATTGGGATCAATTTTAGATTCATTAGAAATTACTGGCACTTGCATTCAA CTTTATCACGGTAGTGTCTATTGCTTATTGGTTAATTCTTccgtttattt atttataaattcAACAGATTGCCAGAGCTCTGTGGTGGTACTTTgcatcg aagttgatcgaattCATTGACACTGTAAGTTAAATGATTTCTTCATTCCT ATTTTCGTTAGCAGTtttatttgaatgaaaaattacaattttttaaGTTA CCAATTAAAAATCTTTACACTATTTCTTTCTAGATGAAAATATGAGAATT GTGTGTAAACTCGTTTAGTCGAAGGTCAAGGCTATCATGCATTTACCATC TGCCTTTCACTTTACAGTTGTTCTTCATCTTACGCAAGAAAGATAATCAG ATTTCATTTTTGCACGTTTACCATCATGCCACAATGCCCATGTTATGGTG GATTGGCACCAAATGGGTTCCTGCTGGACAGTGTGAGTATATTCTTCATC CGGCTCTTGTAAAACCGTTTTTCAGTTTTATCGCTTCTCGAACTTCTACA AATTTAAAACACGTTCTATATGAACTAGGTGTAGAAAGCAATAAACTTTT GAGATTTTCCGTGccactttttatttcaaaattgaaacattAGCATTAAT ctcttcttcatttaaaaaattaagaactgTTGGCTGTACAGCTAAACTTC CTTACGATTAAAACACTTTTCGATTTTAGCTGCACCCGCTGCCATCCTGA ATGCATTCATCCATATTATTATGTATTTTTATTACGGGGTGGCTGCTTTT GGTCCTTCGCTTCAAAAATACCTCTGGTGGAAGAGATACCTTACACAAAT GCAACTGGTAGGTTATTATAATATCTCTAAGTAGAAAAAGGTCTGCTTTT ATTATGATTATCAATTTAGCCTCAGAGTTAGCCTGTGCTCGTTGTGATTC TATTCATATTTGGTATACATGTGAAGAAATCAAGAATTTCTGTCTAACTA TCTTCTtccaggagatttgggtggcagagcagcattatgcatttcgtcct tgtTGGGACTCATCAGCACTGCGTACTGCTATATTTACTGCGTACTATAT ATTAAAAAATGCCAATTTCTAAGGATCTTCAATaagagaatttctttttc atttccagATTCAATTTTGTATAGCATTGGGAACGGCAACGTATTCTTTG TACAGTGGCTGTGATTTCCCACGTTGGATGAGCTGGGCGTTGATCCTCTA TATGATCTCTTTCCTCGTTTTGTTCGGTAACTTTTACATTCAAGCATAct taacaaaaaagaaaaagaaaaatgacgaACTCAGAAATGGCGAAATGAAG ACTTCTGTTAAAGGAACGAGTAGAGACAATAATGGAGAATTAAGATCTAG GAACAAAATCTCATCCTAATTTATAATTATATTTAcagttcgagttatag agtaaggtttataaggcattgatAACTGAAGGGATgggaaaactttttcg agtaaagaGAACATTCTTGAGTGTAGGAAACATTCGTGTTGTATAGGTGC AGAATTGAATGAATTTGTGCTTGCGCGACGCAGGATGCAGAGAAAGTTgt ttactttaatcggattaacttttgcgagattaaatttcgcgatttcgcgt atttttgccattttcgcgaagttaaaactcgcgaaaacgcgtgagattcc tgactcgcgaaattaaatccaccacaaatttttttaaatcgcatTTTCGG CGGAGAAACTAGTCCAAAGTCTCCATAtgtggcaaaaaaaaatttcagca tgACAATAAGTCAGTTTTCACCTcgaatttgacttttttttgataatttt ttctattttaatgattttttataagattttttgattttttaagcaTAACC GTAggtttcaaaggaagaaattttagcggcCATCCAATTCTTGAAAGCTT TTTGCTGAGAATTTAATCTGACAAATAGATTGGTGGGAGAATTTCGCCAA TCTTCTTCCTTTAAAAcagatttttggacctacctggaggtcctataaat taacctttgtccgtccgtccgtccgttcgttcgttcgtccgtccttctgt taccagcttttctcgagattggctcattacgttttttctgatttttggca caatgatgcaaaatggtaatgcccaaaatgtgacggagcccgattttcga aaaaaaatcatttccggccgaaaatgccggaaatgtgccggaaaaaccgg ttttttggcattttctcgagatttcatcattagttttttctgaatttttg cacaaagatgcgtattagcaatgcccaaaacttggccgagtccgattttt gagaaaaaatcttttccggtcgaaaatgccggaaatatgccggaaatcgc cgtttttgcagtttttcattgggcttttcccttataattggttatttttt cattcaaaaacattattaatagcaatgcccaccatcaagcatgtttcaat tttcaataaaattgatttttgaagccgga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021264TCONS_00021264Clytia hemisphaericatranscript
TCONS_00021265TCONS_00021265Clytia hemisphaericatranscript
TCONS_00021266TCONS_00021266Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021264-proteinTCONS_00021264-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000380supercontigsc0000380:294856..298684 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ELOVL4elongation of very long chain fatty acids protein 4 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.01 4.1 10.42 13.81 4.28 4.07 6.26 6.38 4.53 5.33 3.19 3.77 4.33 3.95 2.23 2.54 2.78 2.97 2.32 2.3 3.26 3.9 4.31 4.07 6.7 8.58 5.05 4.63 9.9 7.14