XLOC_011773 (gene) - C. hemisphaerica

Overview
NameXLOC_011773
Unique NameXLOC_011773
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000376:255339..266602+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011773 ID=XLOC_011773|Name=XLOC_011773|organism=Clytia hemisphaerica|type=gene|length=11264bp|location=Sequence derived from alignment at sc0000376:255339..266602+ (Clytia hemisphaerica)
ATCATATTGTTCAACATTACCccctaaaactttttttttgagtcTGTATT TTTACCTCCACAATATTAGGATGTCATTTTGGATTTCTGATTTCTCAAGT TAATTCAGTAGAATTATTAATCTCCCTAATGTTATTAAGAGATACCTTGA GATATTAGTATCCACGGCGCGAATGACACACAGACTCGAATCCAAGATGG CGACCGTTAATGTGGCTGAACTGTCTGACAGTGAACTCAGAAAGAAGATT AAAGAATTGGGTAAGGAGGCAGGACCAATCACTAAGACTACTAGACATAT TTGGGAGAAACGTCTACTGAAATACTTAGCAGAAAATGATGAAGTCGATG CTCCAGTTGTTGCAAAGAAAGAGAGGAGAAAGTCTGGTGGGAGggcggcg gcggtgtcatcCTTAACCAGCACCACATCTTCTTCACGCTCTTCTAGTCG AACAAAAACCCCAACACGAAATTCTAAAAAGCTTGCTATGTTTTCAAGTG ATGAAGAACCAGAGGAAGCATCTTTACGCTCCGTGCAAACCTCTCCAATA GGATTTCCATCTCCCAATGTTGTTGTAGCAGACAAAAAATTATCAGAAGA TTTGACCTCAATCAAAACTGTTTCTCCAAAAAAAGTTAATGAATCGAACA TTAATGTTAAGAGAAGAGCATCAAGTAGAGTAGTTTTAGACTCTAAGAAA TCAACAAGTACAGCCAGAGCAACTTCCAGTGTTGCTGCTGATGATCTAAT TTATCAAGTTCCAAAACCACCAAAGCTTTCAGAGTTTAGTGATGACGATT TCACAGACTTGGTATCAAAAAGGAGGTCTAAAGCATCCTCTCACGTAGTC ATTAACTCTCACACTTCTACAAATGGTTTACATAATGATGACATAGACTT TAAACAGCGGGAAAATGTTTTAATGAAAAGAACATCAGTTACAGTTCCTT CATCAAGCACTCCATCTGCATCTCCCCTAAATTCAACCACTCGAATCTCA AACATAACAAGAAGAAACACACCAGATAGAAATAAAGATACATCATCCAT TGATAAGGAAATAGAGGCAACTCTCAGTCAAGTTAGGAAGTCTTTTGTAT CAAAGAAGCCGAGTCCTCTAGGGACCGCAAGGATCatttcaaatacaaaa aaagttgaacCAGAGGAGGAAGAGGAAGAAACAGAAGATGAAGAAGAGCT GGAAGTCCAATTTGCATCCACCTTTTTAACCTTCCAAAACAtattaaaga ataaaaagacatTAATCAGTATTATATCACTGATCATCTTGATTTTTGCA TTTGGAATTTATTTTTACACAGCTGGAGATAGAGAAATGAAACTTGGAAT TACCCAAGGTATGGATAGCTTTATCAATTTTGCTCTGTTTTGCTTTATTC TCAAACTATAACGGGTTGTAAAGTGTCCATAGAAATCATAAAGGGAGGGA TAATAAAACAATGTAAAAAGCATTTTTATTGGCTAGAAAATCATaaatac accttatcggaaattccacctcCTCGCGCTGTTGCTACGCAACacttttt gggaggtaaacaaagctcgatattgcggttttcaggcaaaaagccttaca aaacacccaaaatattgatgccgaaagagcctccaaatcaactgatgaac caccgaagttgttgtttttctctttctaatagcttctgctagcatcttga aagctttgttctgtttgtttttttcaaattcattgtatttttaggaacat aAACAAGCCAGATATAAGCAAATGAGTTCTTGTTTTACGCGGGAACTTTT TTACAGGCATGGAATTCATGTAGTATATTTACGTGACGGAAATGTAGTGT TGGAGCTGGGCCGTACTACGCAAGCGTACTCCATGAATTGCAAGCCATAC CGCCACTACTCGCGCTaccatttatgtttacctcccaatttcaacggatc cattttagcgctattgtttttgtggaatttccgataaggtgtattgtAAT TAATGAAATGTGACTCAATTCCAAGATCAATATTACTGTAAGCTGgtcca gggatatgttatagggaagctggatgaaggacgagaattccttaggggtc ttcgacaaaaaactttcgaattttttatcggcattgggccgataagcttc agaccccctcccccccttgctcttatcggccaaaatttttcaaatccaaa tttaacatcTTCGAAAACACAATTTCCTCCAATCTTGTCCACCATCGCCT TCCCACCCGTCATCgttgaatttttgtctatttgtgcaccaacattgagt ttgttcatacccGCATTGATATTATTAATCAAAACGAAAGATAAAACTAC GGGATGAAGTCGcaacatttcgaaggaaaaggcagcgcgctggccaatga aaaagagttttttatcaaagctatTTCAAAACTGTACCTGactgtacttt taaagttgCAAATTTGCGCGCAAAGGTGAAAGCACCAAGTGAAATCAtat gctttcagtggagtttgtggacgaaatcagaaagaaattggctgaaagNA GCACCAAGTGAAATCAtatgctttcagtggagtttgtggacgaaatcaga aagaaattggctgaaaggattttcgtctcaatacttgtttttttatcggt atTTAGTTGgaccccccccacccccttatcggcccaatgccaataaaaaa ttcgaaagttttttgtcgaagatcCCTTAGcagattgcttctttgtcttt tcttttgtaaggtgttcataatagaaatccctCTCTCTCCCCTTGagttt tctgtttttataagaaaaatgaagcagacaaagtattcatgcagtacgtc tggacatattttgctatgatgtatgatgttttacatcaaaaaaatatttg cagactagataccccaaaagcttccttgtaaatgaaatctaattttatca gtgtgtgttatgaatttgagaagctttcatgatttcttttttaaactttc ggatgtaaatattttgacaaatagtgtttcaattgacttgaaatcttTTT CCTTAATCAGACATACTGGCTTGCTATCTGAAAacatcagttagaaagtg aggcaccccgtgGTGTAGAAGCAcgatatttcaaatgaaaaagtgccatt tataatcttacagaagaaatttcttacatataacttttgtttttcatttt tttaaattgtcattcaccaatgttttacagaccctcttgctaattaaaag tttttaaacgtgaaggataaatgcagcagcagagtcattggctaagagga aatccaaaatttcatatcaaattttaatgtcagggttagagatagaacaa ggcttttttaaatgtgcgttatcacCTGACTGGTGTAATGCTGACATTCC TCATCTAATTTCATGAATTAGAAAGGTTCAAATCACTGATAGCTAAGCAg ttagagagaaaaaaaatattaacaatcagtgaaattcaatcttcctttTA ATCTTATCTCTAAGAaaggtgtcagaattagatggAGGTGTCTCCATTTT AGACCAACCTTTAAGGTTTGTTGAAACTTTTCTTCACACTTACTTATACT TGGAATACTTAAAAGTAGTTCAATGCTTTGTGGCAttgttgaaaaaactt ttgaatctACCTAAGGTAGATTGATAAGCAGTTATTAATGAATCACAATA ATAATcatttaaagtttttgaaaccATCAAGCATACTTCTTGAAGTACCA gatgtcccagaaaaaagtccccctctttgaagtgaattttcttgaTTTAT ATGGACTGTTAAAGAATCAATCCTTTTGATTTTGATGCATTTGAAAGAGG AAGGGTGAACTTggattttgaggggtcatttgttgaatttggtcaaatag atcaaaagttattgtctaaatgctaaaacattacttttcaaaaaattcga aaaaggcaaaaatgAGGGTATAAAGCCATGTGATATAAAGCAATAACCCA ATGAATATATCCCATTCATTGTGAAAACGTGAGACCTTTGCTTGagcttt ttcatgattttcttctttcttttttacattttctaacCTAGTTTGCACCT TTTACTAATGTAATGCTTTTAAATTACCATGTAGTACTTACAACTTAGCC TGACGTCATACCATTAGGGTacaattcaaatttattttgccAGGATTGAG AAACAGTCTTCAGGGTTATGATTTCACTCAGTGGGTAGGATACATGATTT CCAGTTCCAGCAAAATGTACATTTTTAGCCCAAATACTAATTTCCTCATC ATTGTAGCCTATGGCTATTTTAAATAatgcattttctgaaaatcCTTTCA TGAAGGACCACTAATATTAACCACCTTTCAATAATCAAATTATCACTGGT CAAATAATATGTatatatattcatgatatgcaccattgcaatgtcttcca cggatccaacagctgattggttgaaagtgacgtattgactcactgatttt acgtcacttacaaccaatcagctattgggtccgtgatatAATGTGAGAAg gcattgcaatggtgcatatcatgaataggctTTGAAAAAACATGAAAGAG AAGTTAGTCCATGGTAATTTActaaattttctatttgtttCCTTATAGAT GTGGATACTGATAAGCCAAAAATCAAGGCTGCCAAATGTCTCTTCAATTA CTTATCAAAGAAAGCTGGTAAGTTCTTTACAGATTTTATGTTGtaatttt tacaaagtaaacaaatttttattcttgcatatattttgctctaatttcaa aaatttcatcgcAAAAATTAAGTGTAATTGTTACGCTAGAGGGATTTTCT GGTTAGTAGTATTCCTGGTGAATGAGTCTATCCAAAACAAATTGCCTATT TTATGGTTAAAAGAATAACTTGATTACATGACCAATTCTAATATtacttg tttttgaaaatattgttaGACATATTCCACTTTCTCAATATTTCAACCCA TTTAAAATGTCTATTttaaattagctggcagtgttttttcaaacctcaat aacttttgatagaatttgaattaagtagcaattttgtgctcgttgaaaag acaaacagggGTGCGATATTGTCACAAagaaaaaacgcaaaaaagatcgg aaaatgaagactgaaaatgaagaagaaatgaaatatttagctacaaattt tttagtttttttaattttaaatgtGCGTACACACCCCAGCTANGAAATAG ACTTTAAGTAGCTacaaattttttagtttttttaattttaaatgtGCGTA CACACCCCagctaagaaaaaattacaatcTTGACTTTTTATTCCGACATG CTAAAAAAATAGGGCTGCATGGTCAGAAAAAATGGAGTGATTTTGTATGA TTCCAATGGCCTTCCATtggttagttttttttttagtgGATTTTGCAAAA ATGTATATATACTGAAAACTAAATCTTGCAGACATCAAGTGTATCCTAAT AAAGTCTCTAAAGACTCTTTCTAAGTGTCCCTTTAAAACGATTTTCATTA TGACAGGAAACTGTATTTACCACAGCTTATCAGGCCATGGCAACCATATT GAGAAAACCAGACAAACAggctttttataagcaaaagaCCTGTCCCCTAT GGTTACTTACTATTTAGTGATTTCAGTTATTCCTTATAAATGAAAAGCGT CATGAattgttttcttaaatttattttctaatgaGAGAACTTGAATTGTC GGATTCTGATCATTTTGTCTATGAATTAAGTATGTATATTCTCGGcgcca ttttgtttattttaatcTCCTCGTCATTTTGTGTGGTCTTTATACCTTGC TGGGTAAAATTGTCACCCCTTCTTacctagacaggagacccgtcctgtat ttaAATAaactgatgtatacaggacgtGTTCGGGCTGTGAGGCAGATGAG AAATCTGCCTCAAAAGATTTAcagtttgaaatttgattttagcgTTGTct tcacttactaaaataaatttagaaagttgtgttttttctaagaaagtatG AACAGTGAAATAATAACAGAAtgtgattggctgtgttttcaactgTCGTT GGGAGTTGAGAGATTCAAACTCCTAGCACAAACCAAGCTATTCATTTCGC CatcaatatataaaaaaagaaatcatagcatggatctatAGGCTACATGT CACCTTCCTTAAAAAAAGCTTCCTTCATTATCATTAGCCTTGTCATTTTA GTAGTGAtctaaaatcactaaaaaataaTCTGATTCGGGCAGACATGGCA TggttatttttataattattataatgTGCTCGGTTCTCTtaaaatttgca cgaaaaaccTCCCAAAAAATCTATCTACACagcttaaaaaattcaaaatc tagcGCTTTTAATCAGAAAAGACGGCCTAAGTAATGAATTATAAATATCA ATTCATCTAAGAATTTCGTCGCTCTGATCATATCATCAGCTTTGGCACGT TAATTCTTTTTGTTACAGGTGATGTTGCTTGTGGATCTGGCAACGGAAGA AAATGGATAAAAGTTGCATTACTCGAACAGAAGCTCAAATCCTGTTTTAC AAATGGAGCGGTATGTAACATACGTTTATATTCATTAGCATTTTTACGTA CAAATTAACAAATAAAATGTTTCTTCCTTTTAATGGGGAAGGGTGGAGCT TACTTCTTTGACTATGAATGTTGATTCAAGCAAGAGACAAATTCCTGATT GATATTTCTGTCATTTTTCAGAAAGCCAAAGAAACTATTGACTTCATCAA AACTCATTTTGAAGATAGCTTTGAGTAAGTCCAATTCAtctattttcttt gctttgatCTATTGAACTTTGGTTCCATCTATGCTTTCCAAAGGTATTAT TCGTTTGAGAACCTGCCAAATGATAATAAAATGCGACGTTTTCTTGAAAA CGTTTCTTttggaaaattagaaaattagattgttgatttcaaaagaattc ttaTTTCCATTTCATCAGGTTTTCTGAAGACGGTAAAGAAATATGTTCAC GTGTAGCATCCAAATCACTAGGCTGTCGTATCTCCATCGCGTTATCAGTG ATCGTATACAGGCTATTTGTCATCATCGCAGGTACAGCCACCAACTTTTT GTTAATTCGTGATAGCCGTCTATTATTGCAACCATTCTGAACTTCAAGTC ATTTTTCATTATTGAATATCAGGCTTTGATTTATGGTGAGCACATTATTG AGTGGCGTTAATATATGAAATCATTACAGTTTCAAATAGTTTGAATTCAA GACTTTCCATGCTCtagaaaaaaagaatatattttctGTAATAGATTGTG AAACAAGGGAATGTCCCAACCGtcccatggcttggcagcaggttttaggt gccccctaagatttcaggtgacccctaagatttaggtaacccctggttgc caaatattttaggtgacccctgagccaatgacacgtcaaattttttcgaa aatccttttcaaataatcaaacaaatacaacagttagtttatcttaaaat agaataaatgccctaagaaatAAGAGATAAGCTAAATACTGAAAATTCAT GCCAGATTATCAATGTTTTGTAAGTCAGGGTGCAGATCCCTTGCCAGACA GATTATTTATCTAAGTAAATGCAAcaggattaaagaatttttacagatca gtgccgtagggggggaattttgaaaatttgagatctagattgcttgaaaa tgcactcaaaacatgcacttataagacaattttgacaaattaaaaaagaa aaactttgcattttgcaaaataaccatttttgaaaaaattattNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNtcagtttttgagcattgcttagattaaaatataagatgagaaagtg ccaacctatggtctggtaggctgcgtataattcaatcaccaaacatagaa tctagcccccaggtccatctgaaaaaatttaggtgatccccatggttagt cccccctagccacaggctaaaatcaggtaccaattgctgctCGACCTTTT AGATAATTCAAATCAATAGAATCAAGATtgaaaaagtttatatttttctc ttgtaCAGTTGTGATCATTGGGACGACGATTTATTTCTTCGTTAAACGAC GTTGGATCGCTGATGATGAGGAGACAAGACAAATGCTCTATTACGTTGAT AAAATATTAGGTCagtatttttggacctactttggaggtcctttaaatta acctgtgtcctTCTGTCCGTCTGATGCAGACTTTTCTCACGGTTTTTTGC TCGATGATTATGTCGGATAAACCGGTTGTTTGGTATTTTCTCGAGTTTtc attattagttttttctgaatttttgctcAAAGTTGTgaattagcaatgcc caaagcACAGTAAAGTCCGATTCTTTCCCGGCCGAAAATAGCGGGGatat atgccggaaatcgccgctTTGTGCCGCATTGTGCTAGTTATGTTTATATA TAGTTGACGATCTCTAAGACTACGTTCTAATATTCGATAcgttccattat tcgataatattgaaagtcgccgtcaacaggaaactctcataaatgacGCT CTActgctctactattcgatacgctatTCTATTCCCCTTGAGAATTAAAT TAAAGAACGTCAACTCTTACCCTGCCGTCTTGTTTTAAGACCAGGAATAT CCCATACTCTCGGTTGCCTAGGAAACATGCGCCCAATTGTTAATTACTCT ACTGCATTTAGGAACCTGagagttttttataagaatagtgtattTAGGCT GAAGTTGAAGTATTCTTAGAAGTTTTTCCAAACGGAGGGTAGGAGTGGTC TGTTTTGCAGTGAATTTACATAATATTGAATTGGATAAGTGCTTATTGAT GAGGAACTGCAATAAAAATactacaaaaaaatcatttaatcgTGAAAGAa aggtgaacaataatgtcattactgcggacaaggcttgtacatgagaaatt ggcaaaaatcagccagttgtttatccagagtctataataaatccataatc ttatcaatttgaaaaataacaccCTGCAGCTATTTTTAAGGTATTCTTGG TTTAAAGGCTATTCTTGTATTAAAAGGCGTGTATCTAAACTGTGTAGATG TAGATAAAACTccgggggggcagtgggtttaccaactgacggtatgtgcg gcgaaaaaattggcttttagaatcgcacccttacagtgcagaaaaaaatc ggtgaaattcatacccNNNNNNNNNNNNNNataaattttaaactctttta gagcaaaaaaaatcaacattttcgagcaaaaatttgcaatttttcccaga tttgctgaaatttccacccttacAGTGCATTTATCAAAAGTCCACCCTTA CAATGCATTTCTGATATTTTGAAAAACATCCCCTTAACCGCCGCACATAC CCGTCGGTCAATTTGCCTGACTGCCCCCCCCCCGTGATAAAACTTCATAG TACATAGTACCTAACCTCTTCTACTCATCTCCTTGTCACATAAAATTGTT GACCTGGCTTGCATACAACACTTTTTCAACGAAAAGTAAATGGCAGTGAT CAAAGCAAATAGAAAAAGGTTACTTTTGATTGAGACCACAATAAAGAGGA AAGTCATAAATAGACACACGCTTGGTTGACCGTCTCACAGAGTGAGTTTT TCTCAAATAGTAGACGAGATCTGTGAGGTTAATTCTTTTGTTCCATTCAT AGACAACATCTGGGTGTTGGTTTTTTTGTCGGCATCTAAAAATTACATTA TCCACTGGGCTAGGAGAAATCTGTTCTTTCCTTTATTTGATAAAAATTTA AGAAAGTGAAAAACCGACGTATTCTTTTCTTTATTTTTCCTGTCTCGCCT ACTACAGAAAGCGCTCCGTGTTGTTATTCTGAATAAAACATAAGTTGGAT TGTCGGTAGATCGAAGATTGCTTCATTCATTTTGATTCAAAGGTGTCTTC TATAAAAAAGCCTATCGAATCTCAACTGACGTGATCCTTTCTCACATCCT TCTCTTAGCTCTGATGAAAATAGTCTTGACAATTCTTACTTGAGTTAGTC CTAAAGGCCCGTAATATTCTGAACTAATCATAACTTGACAAAATCAAAAC TAAGTGTATCTAAATCTTGAAATCCTTGAGATTTGACCAGCAAACCTGGG GAGTTCGGTGATTACTGAAGAATGCTATGAAAACCTTGAAAAGACATCGT TTGAAGGTAGTTTTGAGCATTTTTATTTTGCCTAAAATTTACTCGCTTGC TATTATTTGTGAAACCTTCAATAAAACAATAAAATGAAACAAATTTTTAT GAAGACTCGACGATCAAAGTTCGTAAAAGTGGATTCAAAGTGTATTTACT TTTATGCTGTTTTTGTAGGTTTCTGAAGTAAGTAGAGAATTGCAAGACGG TAAAAAATTTCATCtctagaaaagaagaaaaaaaacttataatCCCAACG AAGTTCATAATCCTTGAACTTTACTCTCAGAACTGTTTTTTCGTTTGTTT GAAGTcgtctatttttatcagggccTGAATATGAAAATGAGTTTTTCTTA TCCTTTTGGCGCTTGTTTGGCACTTAACGATTCATCAGAGCAGATTATAT CTCTACccaagaaaagaaatttttgtgctAAGCTGCATTGTAAGTTCACA TAAGACGATCGACGGACTGAGAAAAacccattttttgttttgaaagcagA AAAGATATATAACTTTAAATTGTTAGCTCCCTTCCCTTCAGACAGTCGGA GTCTCCACAGATCCATACTTTTATTTCTTTATCTTAATTTGGCGCGTTAT AGGGCGCTATTTTTTGTTTCGTAACGATGTTGAGGAGTCTGAGATAAAAA CAGAATACTTATGGATGTCGAGACAGAAAATGTCCCTTTTTGTGAGTGAC GAGTCTACTCCTGTCTTCGAAAGATTTTTATCTTTCCATGGCGAGCCAGG CTAAAACAACATGTAATTTTTGTTCAGGTTCAGGAcataaatgaaagtga aaacgtATAAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020991TCONS_00020991Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020991-proteinTCONS_00020991-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:255339..266602 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.29 13.65 43.98 52.51 52.67 44.64 47.11 50.29 34.27 36.66 32.25 26.25 22.92 21.68 22.5 25.26 31.99 28.01 9.13 13.24 18.41 17.53 18.36 20.52 22.31 24.82 9.07 6.56 19.07 19.23