XLOC_011508 (gene) - C. hemisphaerica

Overview
NameXLOC_011508
Unique NameXLOC_011508
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000357:154611..162854+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011508 ID=XLOC_011508|Name=XLOC_011508|organism=Clytia hemisphaerica|type=gene|length=8244bp|location=Sequence derived from alignment at sc0000357:154611..162854+ (Clytia hemisphaerica)
GTTATTTTGGTTCAAAGCTTTGCTGTCAATCTGCCTGTTAAACGTAATAC GTATAAGGTATATATTACAAATTATTACTTTCATAAAGCAATGAGTAACT TGCTGGCTGTAGTACCTAGGATATAGCATGGAAACAAGTCATATATATAG GCGCTATGGTCAGACCTTGGTTGCTTACTACACAGGAaacaatgggccat tccaaaaaaaaaaaattaccccctaatggatgacatcaatttttgaaata aattttggcacggaatttcaggcaaactttaaagagaaggtatcggaatt ccatgaattttacttaattttgcattacagtattggaattccatgatttt tttaggttacagtaacggaattccacTGTTTTGATAGGTAtagtcaggca gctgaggtcacataaaaaagtgcagtagctacaaagtttgcgaacaaact ttaaacagttgttttcaatagataCGACCTTTCTGAANaaaatacaaaat tttgcaataaagtgctgacgtcagcaaaatttcaaaaaatgtcaaaatga tccttttaatggtgtgcagctttggtccaaatttcatatgaagtgatatg ctataacaagtggaaacggtgataaaaaattgaggtaagtttgaaaaatc tggacaggccttaatttgcctgaataagcaaaatgaaaatttttatgaaa aaaaagcatagacatattacataccaatcgacgcgttttttgacgtagat taagaaaaaggtcagtaactatgtttgaaaatttaaaaataaaaagttaa aagcttccgaagttttgatgacgtcatatttacactttctttaggATCGA TCTTCTCGAGTTAGGTTGAGAAATCATATATATCGACTTGAAAGTCTTat atatcgatttttgagagctttcgaatggcggtcttagatttaaattttga taagtttgaatttttgattttttttcgtctCGGGCAGGTAAAATTGGACA TATAGGAAAAGCGTTCtaactttttatagcaaaattttcagatatggtta ctgaccattttcttaatctacCTTAAAAAACCTTCGATCAGTacgtatat aatatgtctatgttggttctcaaaattttttcagttagCCTATGGGCATG CGTGACGTCATCAGGTCCTAAAATATTaccggacacgtccggtaaataat ttcaacaactcaggttgatggtttctagatatttaggttgtatattttca attaaaagtggtttgggattgttcgcaccccgtccaatttttttgtgacc tcagctgcctgtctagtattttgtaaatttgttacggaaattccggactt tcttgaaagcaatttgctatggaaattccatgtcgtccgttgggggtaac gaataaaaactggaatggcccaataattacaaggtctcaaaagaaggttg tctaatgctcattccgacattttaaattttccgggggttttgttgtttgg aattgcttaggtcaggattgctagtaacggcttgtcactagCTTGTTTCT AGATAATATTTGTGAGAATAGGTTTTGTAACCTCCTGTAAATTATCGAAT AGAaacactgtgccgggtgcatactcggcgccttgggccccgcagggttg ctagtaacggctcgaatttcagtcaggttaaaaaaggggtactgctaccc atattataataacattacccccgtcttttttgtcattctataagtatttc caaattttgtgttctgctgtccgagtgtggctcaacgcaacggatagcgc actgggtttctgatcagaaactctttcatttggtgggttcgaaccccggt cgggtcgatatttcaaggtAAGCTAAAACACTTTAGAATAGTCAGAAAAC ATAATAAATAAGCTAGAAAAGTATTTAATTAGAAATTACATTCCAAAGCA ACATCCTTCATATTCACTTACAATGTCTGAAATtattgtccttccgtgac acttTCACCTTGTCGTTCCGTGACGgattaaaaatatcttgttattttta aaaatcttggacttcaatgggtctaatccattgcaggagagtgtcctacg aggtttagaaccattgggaaccagctcaaccctgtatggagctcagaata agcttaactaaggctaaagtacagcgttgtaagcttacagcgtaagccaa ggcggctctggaggcctaaaaaccggttttctggaaaaactactgttccc agccggttctaaaccctcaaaatcgcttcagcaccatgggaatatgctaa ttagagcctttggaagtagctcactcgcttgcaaggtcgcgtttttatgt tttttgcttaaaaaatataatctttccTGTAAAATTTCCTACCATTATgg ttgaacaataaaaatacagttCCAAGGTTTTGAAATGAACTGAATAGTAA AAATGGCTATGATTCATGATATGATGTGTCACTCCACTAGTTTCAGTCAA CATTTCTTACGCTActgctgattttgaaaaataggaatTTTTTCCTTCCT TGACGGTGTCCTTTCGTGACACTGACCTTTCTCAGTTGCAAAGGCCTGTA GccattgaaattaatttttttgactcagttcttttttcaataacaaGCAG ATAGACATAAGTTTCTTCTGGtggtattttggttttaaaattatctttaa attcacaggaatctgaatcagcatacttttgtcttttttaatgtcTTTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNACTATGAAGGCTTTAATTCAGGACTAATACTATTTTCATTAa gtttaccatttttcaaaaatagaccaaaaaaggctctgatttccttccgt gacagaaaggggacttttcaatttggcccaCTAGAGGGTATAGTACCAAA TTTCAGACACACTGAAGGAGACGGCACTGTAAAAGGCGGTGTCTCGTCTT CAACTACAAGCCGTCATGGTCGAAAATGCCAACTAAGAACAATCGAATGA AGTAGCTTTCGCAAATTTATTTGTGAGAGCTTAGCTGTACAAGGTCCAAA ACTCTTCAACAATATTCCCTCTGACATACGAAATATCACTGGCTGTTCAA AAGATTCATCTGTGCTCTATACCCGACGCATCTCACACTACGTCGCGACA AACAAGAGATTGGCTGAATCAAATGCtcttttcgatcaaattatgtTCAA ATTTACGTGTTGGGCTCAACGAGCTGGACAGATgaatatcatcaaatcaa actgaaatataatataaatataaatataatataaGCATTACACGAAGTTA CAGTAGGTATGTTGGCAATGAAAATCTtaaaacgccggattgaaagtaaa atctatcgctatttaaaaaaatgtatatagtcctccaaaacaaaggaacc gctagatgcAATCCGTTGTAATGATAACAGCATGTTCTTTGCgggttttg gatgggaaataaatagcttcaatttctcttgcctgaggaAGGTTAAAGTt ttgcctctagcccttcgggcttgaaactcacaATGGTTATACCATAGTAt tgcatagctgtcaactctccgaAATTCCCCCTATTTCTTGGATTATCAGG GAAGATTTTTCCAACTTGGAGCTCTCCTGCATTTTTGTGAGGCGAAGCTG ACAGCTATGGTATTGTTATGGTATCAATCAGCCATAGAGTGCAGAGGGGT TGAAGCCCCCCCCTGAAGGTTCAGCCCCCCCCAGAGATTTAGCCCCCACC AAAATACGAAATAGACAGCCCCCCTaccaaaatacacaaaaaacaaaaat gttagaatggaaaaaatttcaaacaatgcaAGGTCTTCATTTTGCATGTC CACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTAGCCCCCCCCTGatcttagggaaa aagagcccCCAACCAGAACTTTAGGCTCTAGCCCCCCCCTAAGAGCCAGG GGGGTTGCATTCTATGTCAGctcaaatattaagaattttccACAAAATGA TGATGACGAACCAGAACCTTGCTCCAAGATGGAATTGAATGAAAggagct gaaaaattatttgaatCAAATTGACTGGAATGACAAACTAAGCAGTGATG ATCAACAAGATATCCTAGAAATAATATCAACCAAATCTGGCTGGATAAAT TAAAAAGCCATATTCCAGCAGAAAAAGTCTAAAGTCTTTTGCAAAAGTCT TTCAATGATTCCAAGTGTTACATTGAAGCTAAAGCGATTAActcaataaa gaaaaagaatgcAATGGCAATTGTGCAGTTTTCTTTTACATTCGCAGCAG TCTTTCTAAATATCCTGTCTTAGCGAATCTTTTATAGTCCCTCTTTTCTC AAAAGGATATCTGTAGATTATCTTTAATGAATGAGGAATGAAGCGTGAAC CATCctattttcacttaaaaaaataaacagcAAACATGAAACCATTAACA ATCTCACAGGATTTTGAATTTGGCAAATAAAAATAGACTGTATAATTATA CCCTTATTAAAATCATAAAGgctggtgagtccagtcaaaacacagatttg atctgtagcgtcacgcttcacctttaTTGTAAGTTTTTCTCCCCAAACGA CAcgttgagactcacggctcGAAAGCCTATTCGTATTCGCCTAACAAAAA GGGGAAAATTTGACAATAAAGCATGggaaattttgtaatttcaaaaaaca gatgaaatattttgcatactgTGTATATGTGTATATATTATGTGTATAta caaaatattggaaaaaaggacgaaaaagatattattattatttttttttt gaaaaatgccaaaaaggaaaaaaaactttcaaaccagGGAAACAATTCCA TAATTTCCCACAGAATgcgaaaaatagaaaaaatcttatactgggaaaca tttttataatctgaaaGATGTTCattagataaaaattttgaaggaaaatc ccATAGATTTCCaatcttttggaaatttttttccggtttcTATAGGCaca tggaaaaatggaaaattttttttagttttaacgcCAAAAATTTTCCACAC TTTTAAAAACTCACAGAAGAAAGTTTCCAGTTGATGATTAAAAGTCTTTA ATGTGGGTTATTTTCAATTGTACACACCTATATTCTATGCGATAAATATT ATAGTTATCATTCTTCATAGAGCGAGCTGTCAGCTTAAAGTTGTTTTGAT GGAAATTCAAAATAGGCACTGATAGAGGCCTTCTAAGGGGTTTCACTGAC CGGTTAAGTCATTGTTATAGGAGAGCAGATGTAAATATACAGGCAagatt aaagttttttatttgtgaaagttgacaaaaacGCCCTGTCGGTTTTTCAA GAAATTAGATCTCTCTTTCATCCAAACCAACAAAATGGGAACAAAACATC AGAATCCCGGAACATAATAATAAAAACACTTCATCATCAAAACTCATCAA AGTATAAAACCAAAGACAAAAAAGTAAAAGAGTAGTAGACAAAGACCTAG CAACAGTGCTATTTATTTTTGCAACCATATTGTTTTGACAGTAGAGATCA GTATGGCCTGATTACCAATACACTTCTGATACGGCCGATGCTTTCCTATG GCAAGGAGAATTGAACGATGTACGCGTTATTTCCTCAACATTTTTCCAAT AAACAATGTTATTTACCTGGGAAAAGAATGTTCTACTGTTTCCAAAAGGA TTACTACatataaaaaaaactcaaattggGTATGTAAGTTCGTATACATC AAATTAAATCTAACGGAGTTAATTTGTCCTATCATTTCCCGGGATATCTT TCATATATTTATTATCTCCCAAATATTAGCGTCACAGGTTACGGAGGGTT TACTCATTCATGGTTAGCAAGATGGCACATTTTGGGTCAGTGCAATCTTT CTTTAAAAGGTTGGCACTTCTAAGAGGGCTGTGCTGATATATAGGAAATA CTGTTTACTTAAACATACTGCAATGATGCAGTTTGTATATAATGTTACac tctttttctgtttttcttttttcctagattcattttcttaaatttaaaag taaattaaaagatgATAAATACATTTAGAACCATCGAGAGATTTGCTGGT TTGCAAAATATCAACAAGGTAAGAGCTCTTTCTCACGGCAGCTGGTAACT AGATCTGTCATTATTTGAAATTGCTGTAGCTACagtaaaaataatattta attttatttattaatgTTATTgtggaaaatctttttcagaATTTCCCTTC TTACTACTTGCGGATACTTTCcatctggtctgcaaaatcttaaaaaaaac ctACTCAGACTTTGATAACTTTGATTTGTTATCTTCACTTGATGTGTAAC TAGAAGTATGAAAAAGTAATTCGAACCAATAAGTTGCTATTTAGTTTTCa taaatttatcattttattctttaatcagattttttgatattttattttag gTCTGCTTGTGTCAGCATTTGCAAACAAGACAGTCCAGCTCAAGTGGTGT AAGGTAAGTTCTCTGAAAGAAAACTATATTCAGAAATAAAGAATCCTCTG TACCATTGTatttattcttttgaaaatattcttgttttcaaaattgtttc ttGTTCTAAACACCCACAGTGACTCATTGACACATTGTAATCAATTACTG CTAGCGCTGAGAAGAAATAGAAACATAATTTGGTGAATTTTATGTTATTT CTTTTACCGATTATATTTTTTAGCTTGGTGAAACCAAAGAGAGAAAAATA TCCTTTACAATACAAAGTACGCGTTATAAACCAAGATGGATCTTCATACT TTACCAGATATCACAAACCTATAGGAGTAATTCAACTACCGCTTGACCCA AAAACTCTAACAGAAGAACAATTGAAAGCACGTCATCGTAAACAACaaag tgaaaagaaaatcaagattAAAGAATATaaggaaaatgtcaaatttGACC GTAGAGCCATGGCTAACATAATGAggaagaaaaaataatacatATTAAAC TTGATAAATTTGAATTCTATAAGGATGTTATTTTATTGTCTATATCTAGA GCATTGAAtggaaatattttgttatcTGGAGAATCCATGGCAGTTTTATT TAGCAGGTTGCTGATATCCGTCTAATGAACCCTAATTCCTATCAAGAAGG AATTTTGTTGGAATTTTTTCAGgcaatttattaatttatttgaacttctt tcaatcaaaatttttccaaattgggCTAGGATATGATTTCTGAGAAAATT ACCAGGACTTTTCAATGtactttttttgaaacatttcaaaattttaaacc ctCTCCCCTTCCCCCAGGTTTATCTATTTAATGATTTTGAATAAGATGGA TGTAATTTGTCAATTCAATgatatactttaggcgtacaaactttcgtgag cagaaactttcgcgaggacgaaaaatcgcgcaattcacgacatttacttt cgcgaatttaacggaaaaatattttttgcgagcataaactttcgcgaatc aagacgtaaaattgagaattttcacatgaaaaatggctcagagggacaaa tacttcttggattggttGAAACATTTGGCTGTTgtcttattagtctttta gcaggctaaaaagtgccataaaagttaagttttacagattttctattttg tcaagaatttttcgcgagcataaacttttgcgaatggcccttcctagaat ttttaaagacatttactttcgcgaaaagggccaaaattcgcgaaaattgc gaaagtttctgctcgcgaaagtttgtacgcgtAAAGTACTGCCTCAGCTA ATAATTTGTTgatactttttttgttttcatgacGAGGTAAAGACCCAGTT TAATTTTGGTAGGTCTGTAAAAGGGCAATTTTACAATCTATGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020476TCONS_00020476Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020476-proteinTCONS_00020476-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000357supercontigsc0000357:154611..162854 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
53.12 51.61 21.99 15.06 15.01 10.95 14.64 16.44 13.06 10.86 8.64 7.95 6.29 7.29 8.07 8.3 12.76 12.79 4.58 4.98 9.27 8.2 38.34 35.37 13.43 14.54 10.12 7.98 16.24 17.89