XLOC_011384 (gene) - C. hemisphaerica

Overview
NameXLOC_011384
Unique NameXLOC_011384
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000351:64665..72213+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011384 ID=XLOC_011384|Name=XLOC_011384|organism=Clytia hemisphaerica|type=gene|length=7549bp|location=Sequence derived from alignment at sc0000351:64665..72213+ (Clytia hemisphaerica)
CGCCcacaacaagcaaaaaaatttaaatttgtttcGGCGGTTGGCACAAG AGCAGTCgatgtaaacaaagatggcggcaaaaaaaATTCGATAAGAAATA ATGCGAGGATGAGAAAAAGAAGAGGGAAAAGAACATTACCACATTATAAA ACACAACATGCAAACTGAAGGAAAAATCATTAATTAGATATAGGCAAACT AACAGGAATCCTTTCTTTCAGGTAATCCTATTCAGCCCCCTTTTATAGGA AGGGGTTTTATTCGATGGGCTTTTAAAAAATAGTGACTGTAGTGCATttt ggtagagcatccagctacggtgtaCAAGGTTGGGTTTAACCTCAAGCCGG GACATACTGTAACTAAAAGATTCCCAATGGCTCTTGATCATTGTTCATTG ATGCCTCTCACTCTCTCATCTGCTTGTTGATATGATGCTCATATcgcagc aattaagagaagggtcAAGGACAAAATTTGAGCAATCCAGAGAAAAAGAG TGGCATCCTTCAatacctttgggtagatagctattgaAAGAAGAGCCCTT TGTTGCCTCTGACTGGCAGGATCGCAGACTAACTTaaaagaagggggtgt ttttttaaAGTACCATGATTGAGTGGTCCTAAATACGACAGCCCTTCCTA AATCCgatcagtcaggcacatcctggcaaatgaacggggtgagcatttgc atggggtaaatgagataggacgtctcaggctaaaagcgttaaaatgaata aaaatgaacttgaaactgaaaaagggaaaaaaggaagaaaactgggaact tcatttttttgttaaaagtttctttaatcttcgaagacaaaattgaccca tggaaaaaaaatttcatctatgcagttctttgaaatgaagcaaaatattt ccaacccggttcaattgcgtggggtattcagtgctattacatcacttttg ttttcgaccccttgcatttgccaccagcaatcgcaagtgaaaaatacccc gttcatttgccaggatgtgcctgactgccgatggggtctttcaaagatac aaactaaaataaaaacaaacctttcgctgtgacgcaatgaagataccaaa gtgtcaactaaactgagagatttgagaAACTGAACCAATTTAACCAAATA ACAATATTGTTTcttacaaaacataattttttattacaaaattgttaacg ttttaaacacgagcaatggattcagaataatagaagtaattatttttaca aatctCACTTTTTTGAACACATCACagtaattgacatcttgacattatag tcatcttgttagatgttttgtttcaagagttcttacaatagtttattgtt caacttggagagggaatctTTGCAAAcataggattttttttcatagcagt tatttggggggttggatttaggcagggctgtcggatttaggaccactcac ggtatctAATACGGTAtacatttcaagattttttgattaCTGTTTAGAAG AAGATTGAATTTTATAAGGTGCTTTTTTATTTGTGGAATAAAGTCTCAGC AAAACAAGGCAAAAAGAGTCAAAGTTATAGAAAAAAGTTCTGTTTTCCAA GAAATCATTTGACTAGACTGTTAGAGCTATTCAGGTCTTTTTAGATTACA TttctaccgtcaactgctccaacttgggactatctgactaTTATTGTGAC AACAagtcaacaagtcccatgttgcgactactcgtcccaagttggagcag ttgacggtacgtTTGTGAAAAAAATCTGGAAGTACCtcgattttaagcat ttttaaagTTCACAATAgtaacgactttctttttattacggaaaccaaac gagtgagaacaagtcataaaTTAAAACTGAAAGTCAGCACTCCGTGGTTG TGACAAAGTTTACAAAATTGTTATAAGATAAAacagggggggtcagtgta ccagaaggtggcatgtatccttgggtgggtgggtgtttgagaaaaaaatt tgtcatgtactacctgcgtactataattggggtgttgggtccaaaatcaa ttttgatttttactacctgtgtaccaaaataggggtgttgggtccaagaT CGATGTTAACAGTATGGAAACAAAAAGTttcagaaattatctgctaaaat agaaatgtaaagttgttctattataaattgatcaagccaagtttttccaa gatcattcttccaaacttcttgaaatgaattgaaatcctaccagatccca ctgaaatgaaggtttatcgagtcaatgtaaacattcgaacattcaAATTC GAACATTCGAACATCAGAGGTGCCAACTCTNCAGATCCCACTGAAATGAA GGTTTATcgagtcaatgtaaacattcgaacattcaaattcaaacattcga atttgaaCATTCGACCATCATATGtaccaactctcacgcattgggtGTGA GACTCACTCATTTCCACATGTTCTcacgaaatttttgaaaagttcgattt ctcacgcattttgcatttttgagaaaaattttcctgtttttccgattttt ggaaaaaagttttcccgatttcccgagtttccaaaaaaaagtttccccga tttcccaatttttgtaaaaatgtttatagtccggcggcgatccaggatca ctcttacaattagtaaatatgggtttttattttattttcccatcatatgg tcccttgggaccccaaaaccagtttttgccaagctggcaaagctgNtatt ttaacaacttttttccaCATTATTTTTTTGAAGCATTTCTTCGAAGAAGG TGCCTTTCTcgaaggaattttataacattttatggcagattaaaaagaca atcagAAAACAAAggcttcttcatttttcattaattttgcaTTTATGGGG AAGAAGGCGCTGTAGTATAGTGGTCATTAACTGCACAGgtgactgaggtt cgattcccactctcagcagttcacttggcaagtgaatcgcgattccccat ggttgcaaaatggtggctatgggtaattatatttgttcttttgctatttt cttttgttctatgtgaagtaaagacgcttcacaaatcgaagtacttccac taactgaaGGAAAATTGAGCTTCAACAAAATTCATGTCCACAGGCCTTGA GACCCTCAACCcccaaaataaagatttttgataacttttgaaatatttgg ctTTAAATTTTGCAATTGTGCACAAAATATGAATTGGCATCTTTTGTTAA GCAGCATCTTTTGTCATNtacccgattttccgattttttctaGGTATAAA AGGTAGTAAATGGGgagtatggggtggttttgttttttttccaggTACTA CCCAGTAGTAAATAGGGgatatggggtggttttgggattttttatgtagt atggtgtacttcaggggtgggtgggtgtcaagttttgaaaaataccttgt agtacacatacatgccgccttctagtacactgaccccccctggATAAAAT GACgtactttttatattttaacaacttttttccaCATTATTTTTTTGAAG CATTTCTTCGAAGAAGGTGCCTTTCTcgaaggaattttataacattttat ggcagattaaaaagacaatcagAAAACAAAggcttcttcatttttcatta attttgcaTTTATGGGGAAGAAGGCGCTGTAGTATAGTGGTCATTAACTG CACAGgtgactgaggttcgattcccactctcagcagttcacttggcaagt gaatcgcgattccccatggttgcgaaatggtggctatgggtaattatatt tgttcttttgctattttcttttgttctatgtgacgtaaagacgcttcaca aatcgaagtacttccactaactgaaGGAAAATTGAGCTTTAACAAAATTC ATGTCCACAGGCCTTGAGACCCTCAACCcccaaaataaagaattttgata acttttgaaatatttggctTTAAATTTTGCAATTGTGCACAAAATATGAA TTGGCATCTTTTGTTAAGCAGCATCTTTTGTCATAACCAGGCTCATGATG TCATCATTCTTTgaagaaaatgctaaaaataggaccccttctaacttttt tcattttgatttttttttgctccaACTTTGTCTCACACACATGTTTTTTG GGTACAGGACCAATCTTTTGCAACCTGCTGGTGTTGCATTTCACAGACCA GCCCAAAATAGCCTTTTTTGCCTAAATCTTNAAAATGACgtactttttat attttaacaacttttttccaCATTATTTTTTTGAAGCATTTCTTCGAAGA AGGTGCCTTTCTcgaaggaattttataacattttatggcagattaaaaag acaatcagAAAACAAAggcttcttcatttttcattaattttgcaTTTATG GGGAAGAAGGCGCTGTAGTATAGTGGTCATTAACTGCACAGgtgactgag gttcgattcccactctcagcagttcacttggcaagtgaatcgcgattccc catggttgcgaaatggtggctatgggtaattatatttgttcttttgctat tttcttttgttctatgtgaagtaaagacgcttcacaaatcgaagtacttc cactaactgaaGGAAAATTGAGCTTTAACAAAATTCATGTCCACAGGCCT TGAGACCCTCAACCcccaaaataaagaattttgataacttttgaaatatt tggctTTAAATTTTGCAATTGTGCACAAAATATGAATTGGCATCTTTTGT TAAGCAGCATCTTTTGTCATAACCAGGCTCATGATGTCATCATTCTTTga agaaaatgctaaaaataggaccccttctaacttttttcattttgattttt ttttgctcaaactTTGTCTCACACACATGTTTTTTGGGTACAGGACCAAT CTTTTGCAACCTGCTGGTGTTGCATTTCACAGACCAGCCCAAAATAGCCT TTTTTGCCTAAATCTTATTTTAGAGTTTGGAAAGTACTCTTAAATTTAAC AAGTGTCAGGTATTGATAATACAAGCTTGCAGccaaatttttagcaaaat tagATGAGCAgttatgctgaaagtgagcatCTTAAGTAAGAAACAGACCA ATCTGTAAAATATGAATCACGCACATGACCATAATAAGGATTTAGCATGC TGCTTCAGATGTTCAATATCTACCACTGCTTAAAAGTCAAAAGTTTTTGT ATATAGTTCCTTAGTTCTGACAGGGGATTTGTCATTCAGTGTTCAATTGT AGGCGCTGTGGTTCGATTCTCACTCacagcagttcacttggcaagtgaat gaaccttcgcccgggtcaacccatgccatgtaaggggaattgggtagtca gttcaaggtgctgacggggcactaattgaaagcgtctatattTGCGAAAA TGGGCCTTAAATTCCTCCtgcgactcaaccaaatagaaatagaaatagaa atctcAGCCAAATTTAcattccggtctgtaaaataccaatcaGGCAGTTT TGCAAATTATCTCCAATTATCCAAGTCTACCATTGGTTAAGATTTAAAAT TCATAGCACAAAATCAATCTTGAGACTTCACGGTGACTTGAGTGCTCTCC CCCTtgcatagcgtcagccccccttACTGGTTGGGGGAGTTACAacctaa atttttcccaaaaaagggctggaagtacaccacttttttggggggactTA TATGTACTTGgagagctaaaatctcatcacctAACGTTGGGGCTAAAATA TTTCAGCTTAATAGTtagcttcaattactcaaattgaagctcatgaatct gaaaaattttcgcctgcgacgcaatatttttatagaaagtgtgcaaaatt ttttatcttaaacttagaactgaacgcaatttacattggaaaaccctttt ttactagatcaattttttgaaagtgtcaagggtcaaaagtccttggggct aacaaaaaattcataaatctttgagggggacttaaaactcaggggggacc taatttttgccttggacctaaacccaggccgACGCTATGCATTGGTTGGC CCAAATAAGGAAAGATGCATGTGTAATTGAATtgcttttcattaaaataa tttttattaggTTTTACAGAATTTTTCCTTACTTAGTCTTTTTTCTAGAC TGGTTCAATTCTATGCAAAGCTGGATTTTTCTTGAAAGCTTTATTTTTGC CATATTCTTGCGAAATTTACTCTtgggtgccaaataaacggggggggggt tcgaataaacggggggaattcaaataaacggggggattggaaaattttcg aaattttaataaacaggggtgacctaattgccgggggttggaaattgtac ttctgaaaacccaaaaataaggtaaatacaggctttttggagcaaaataa ggggacttttttgccaactgaaaatattcttacaaattaataaacggggg ggtcctaataaggtccgaggggctggaaaattttcgaaaattaacaagcg aggggggcgtttatttggtaCCTAAGAGTACCAGAATTTTTGGCATTGtc ctacaatttttttttgtcctaTTGAAATTGAACAAATGTAGGCTAATTTG ATAGTTAATGATCACTTTTCATcaccaaaacaaagaaactAAAAGTTATC TTGCAATATgttttctgtttaatttgattggCCGATTTTAACGATTTCAA CCACTTTCTAAAAgtatatttttcattcattttttaaaaacaaaactttt gagTGATgaatttactttttattttagaaaaatgaataATTATATTGGTC TGCAGAGTGAATACCAACAACAGTTCATTGGTGATAGCGATGGgactttt cgagaaaattatCGAAACATGTTACGAGAACGAAGCCGAAGAATATCTGT TGAAAGAAGTCATACACCGTTCACATGGTTTGATATTAATCAAAATGTCA GAGAAGACAAAAACGCTAGTATTATAATAGACGATTCAATTATTGCAAGG TCGAAATCTGCTGTACCGGTTGTAGAGAAATATAAATCACAGTCCACTTC ACCTATGTCAACATCGTCTCACTCTTCAGACGATGAAGAAAGTTATAAAG AGAACATGTTTCAAAGAAGCCAAAGTGTTCAAACAAATTTTGATATGGAA AAACATGATATTGAAGTACAAACTCCTGTTCGACATCGTCCTTGGTTAAA ACCAAAGGCATCAGTTCGAAAAAAGTCTGCTACTAAACGCCCTATTGATA AAAAGTCTGCATTTGTTCATGAAAGACCTTTAATAGCTTATGGGCGAGGT GATAAATCCTCTTTAGTCAACAAGAAAACATACAATGTTAAAGCACCTTT GACTAGTGTCAAACCAACTGCTTTTTTAGCTGCAAAGCGTAGAGATGAGC ACCTCCGAAAGACAACAACAAAGAAAGAAAGGGCAtcacaagaaaaattg aaaactcaAGCTCTTATCGAGTCCTTAACAGGCTTTGAACAATGGCAAAC TGTTTACCAGAAAGAATTTTGTAGATGAATTGATTGATTATTATTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020280TCONS_00020280Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020280-proteinTCONS_00020280-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000351supercontigsc0000351:64665..72213 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.46 25.73 28.59 29.12 26.67 21.27 20.6 21.9 8.62 9.59 11 6.6 3.97 3.66 4.19 5.96 8.32 4.53 1.59 2.11 4.94 3.84 21.64 20.94 45.23 33.87 6.2 5.96 14.16 15.76