XLOC_011324 (gene) - C. hemisphaerica

Overview
NameXLOC_011324
Unique NameXLOC_011324
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000350:67061..78478+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011324 ID=XLOC_011324|Name=XLOC_011324|organism=Clytia hemisphaerica|type=gene|length=11418bp|location=Sequence derived from alignment at sc0000350:67061..78478+ (Clytia hemisphaerica)
tgtttggtaattaattcattgaaaagataaataCATCTGATTGTGATTAC TACTGTCTTTTTACAATGAACAAAAGAAGAACAGTCAGGTTTTCATTGAT AAAAAGATAAACAATTTCGATttgtttctgtttgtttttgtttcttttcg aACTTTCCAAACGCGTCACCTTTGATTTTCAATCGACGGGAATGCGCACT TCTCCGttgacttttttggaaaaactccAGTACTCCATCGTAGTTATTTT TACTACTTCGGGATTCGGACTCGTTTTTAAGGGACGATAAACAATGTTTT GTTCGCTAGACGTGTAACTCAAGAAGTATCAACTTCGATAGGTAAGCTAC ATGAAAATTagctttcactttcgatttcagagaaatttgaaaaactgaaG AATCTCTCAAAATCTTTGGCTGTTTGGCACCATTCAATCATTGTGTGAAC AATGGCTTCTGCAGATATTCCAACAACGACTGTTATcagaataaaaagaa aacgcCAAGAAGATCCAATAAATGCTTTAGGTGTGTAACTAatcaaattc tttatttttcagtcAGCCAGTTTTAAAAACTGActaaaaaaaagggaaaa tttctatttctttcttttataaacaaAAGGTGCTGAtagggcgctcattg aaagcttGTTTAGTTGCAAAAATGTGCTTCAAAGACAGCTGCAACTCAAC CACAATTAGAAAATAGAATTATAGTTGTTTAGGTTCAGATGAAAGCTATC ACTATCAGTCAATCacggaaatccttgcatttaTTTGCATGTATTTGCAT CACAGGGTATGCATTTGCAACGgtttcaacaattttttccaaccctGTGC GAATGAGCTAGAACGTGTAAGGCaaaatgcgcgaaaattaacaaatctca actttaaaatgaaaatggcaTATAAAACGAAGATGAATGgcattttcctt ttctctttttagaaGGATTTTCTTTATagcctttttagaaaattgttgTT TAcgggttaaaattttgatctgtgcatttttttataataaagagtAACAT TTTTTCACTCTGTGTAAATAAAACGGGTCACACAGTGATGAGTGTAATTG CACGGGGTTTttcgtcactttcgttttcgacccgtTGCATTTGCCACATG TTGAATcctgtgcaaatgcaaggatttctgTGACTGgctaccgtgagagg tcctaaatccgacaccactgcctaattccgaccaccccaaataactgtta tgaaaaaaaattctatgtttataaacattccctctccaagttgaacgata aactattgctagaactctcgaaacaaaacatctaacaagatagctgtaat gtcaagatgtcaattaatgtagttaaaaagtgtgagttgtaaaaataatt actttttattctggatcagttgctcatgtttaaaactaTAATAGtattgt aataaaagtgacttgtgcgggaaaatacgaaacaacttgggctggtttcc atcaagaaacaaacagactaaattgcaaGAATGGcacgaagttgaaaaaa gggcggatgcggtagcacttaatttgaataacaaacatcgaatcaatgag gcggcaactatcaacgccctctttaccacccataagtccggatgtttatt tacggaaggcccgcaatcaagccaagtgccagtgtaaagtaataaaaacc aggcttgattacgtaacgtttcaaagtGAGTatgctcgtacacagacctc ttttatatttttgtgtgctttggaaaatcaaaatatctcattacttttta tgatgctgtttctactgttgtcatttatgacgttgtgcatattgcaataa aaaaatatgtttttcatataagaagcaattattgttatttggttcaattg gttcagtgtatcaaatctctcagtttagttgacactttggtatcttcgtt gcgtcacagcgacaggtttgtttttattttagtttgtatctttgaaagac cccatcggctttaggcagtggtgtcggatttaggacctctcacggtatga caggctagctctaaagctctaaaacagtatctaataacatgaaaaccaga aaatgattctttgatgggaatcaaaactataaagtgcacttacaaacatc aatatgtcagatctaacaaaattaataacgacactcgatttttgaggatt acgattttaccagctttttagcaatttttggctcgctaacccaaatctcg caacctctttaccttaaaggaagatcgaaattagagtttttcagcgttcc aaaaaaacataaagcaaaaattttttcatcttcacaggatcgattctcaa caacaaaatacatcttttggtctttgggtttgtttctgacgtttttcctt caaagaatatcgatcactttccttttctcCTCGAGCGCGCGAGCTCGCAT TCTCACGTGGACGAATAAAGACGAGGCGGcgatcttgcactgagggtgct acttagtttctgCCCTATTTTGCAcccacaatagaatggtccaaatacag ggtattccaaatgataaacaatgtcgttctgtaagtgtttattttctaag agatacaaatagtatattgaattttattaacttatttatttaagtgttta tgagcccaaatttaaatatctggttaaataaaaaacaaatgatatcaGCT CTGTTTTCCCTCAAACCCCCGAGAAAAGTTTTTTGGCCGACTTAcctttt tacaaatttcggaaaagaactcccataggaattccgatacataacccgat tggttcatttcggaacggcttcaagaaagtcataatggcagatgatttta aaagtttctgaggaaatgtgtggaatttattgatgttgatggcttgttga ttctttaaagaaaaaagataacaggtatagctttttctaatcctggatta tcgaggttccagctacactggtATAGACTTTAAACTTGTATAttaagatt acgggatttcaagtacgggccgattttactttcgttttgagtggtttcat tttcaatttcaagccaacatcttagcaacggggtacttgcccatagttac aggggtttgtgcaaaaaactaaacatagaaaattttccaaattccccatt tcgattaaagcaatgaaaaatgaaacatttctatgtttcacttttttgca cctattcttcaaaatgaaaatatttaagattctaagttcttcttttattc attgattttttacggcactttgttgacaatctaactctcgcatcaaattc ccgctttcttcagtaaattgaagatgagaaaaaacctaagccttaggatc acggattgaaacaaatatatgaagggtgggattttacagccctGTGCAAG GAACTGAGAgagaagttgttggaatgtttacaagactcttgacagaaaat ccttcgttttattgtcaatgatgacagtcaGTCTAATCTGAAACtgctat atcaggattagaaactaggctagtcttacctcttttatctttccctttac aacaatacaatgctgacaagtaaTCCCTATAATGtaagagaagtttatat cgaaatctgcaacagAAAAAAGACAGTTGTGgtttcttctactgattgct tcctggCACTCCTTCACAGTTGTTTagcaaatttccaccaatgagattgc cgcATTTCACACGGCCCTCATTTTTGGCACtcgtggcctctcagtgcctt gtaAGACAGGCGAATTTaatgaatttaatgtgaccgccatactggctATC ACGGCCAAAAATAGAGACTTGTATGTGTGTGCAGCCTGTTAGTGCCTAGA GTGTGTAACGGGGAACCAGGCTGACAAAGCgcgcaaatttatttttatca tgtgacttgaagcgtaataaagttgtaaaactTTAATGATGGACCAGGAT GGAcacaagtttgcatgcgtttcatgtgttgtaaaattgcttataatttg gctgcttttttaattgaaagaattttgtaatGTTTACTAAAGTTAtggtt tgatggatgaacttgtttgataagaatgataccaagaatttcattcaaga tTCAGTGTTGACTTTAAAGGAGGGGTGTCGATAATAGACAATTTCACGGT AACAAGCACTGCAGCTTCAAATGTGGCATTTTTTGCAAGGGGCTGGATGC AATCAGGGCTTGATTTGTCCTTTTTAATATCAGTTtgcatagtgtgcacc cccccccctaaattaAGGGGGGGTTTGTTGATTTGGGTTCAAAATCTTTA GGTGGGATTTccgattttttggatttcagagggggggggggacagGATTA GGTGGGACCTGATTTTTTAAGGTGGGACTAAGGTGATTTGGTTGTAAAAT TGAATCATCTCGTTAACATCAATCAATGATATATAACTTTAGTAGTTACC TTTTACTATTGAAACCTAGTGGATAATCTTGTACATATGACCTGTATTAT ACTTGAAAGAAGACTTAAGttttgcttaagttttcaaaatctTGGTGGGG ATATACTTAGTGGTGGGACCATGCATTATTGATTCTAGGTGGGGGTTTTA ATGTGTGCTGGGACCTTATCTTTTTGGTGGGACCTGGACCCCCCTTGCAC CTTATTACCTTATTACCCCCTATTATAAAGTCTTAGAATGGAATAATGGT ctttttacttttcaataaaagaagGGGGAATTTTTCGGTAaagataaaaa gattttaaattttgaaatatctcagaatcacaatttcttcaaaaatccag TGTACATACCAACTTTGAAAGGTTGCTCTACAAGATCTGGTTGGTCGATA TTTCTGAAACCTACGTCATTCTATTCAGAAAAGGTTGAATAGCAAAACTG TGCCTCCGATTGTTGATTCGAGGTTTTGTTGTGGAGAAAACTCGCTTTAA ACgtgaaaaacctgttttttaacattgcataacatgaaaagttaaatatc ttttgaatgAGGCGTGTAAATGATAAAGCGGAGCACNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaattagaaaaatatg tCGAAAAAGTAATTACATATTTAGAAAGCCATTGAATTGCACTTTAACCA CTCCAGTCCAATTTCATCAAAGAAAGGATGCTAAACAATTGAtgatactt ttcaaaaataatcaaattgacCTATCTGTAACCTTAACCACAGAAATcta attgaaaatttcattttgtgcCTTTTCAAAGCTTTTCAAAGCAATTTTCT CCTCccaaataattaaaaatatacAAACATTCCAATGGGTGCAATTTGGT GGACCTTGAATGtgtaaaacatttttcatgaaCATTAACCTATTTAAGTG AAATAGAATCTAATTATGAAATAAATCCAAGCTTTGATTCTCTTTTGCTT TGGCTGTATTTCTAGATTTCTTGGTAAAATATATTATTAACTAACTATTT TCTTCAATGGGTTTAGCGCAATTATTGAAATACTTATTGGATGTCATGAT CAATTTCTAGTAAATTTTGTTATTGTCAtaaatattttgtcattttccTT TTTATCATTAAAAGAATAGTGACTATTCATCAAGGTTGGTCTTGAACTAG TCTGTTTCGATAGACCCTTCGAAATAGCTGTTTAATAGActgtttatttt gactttgacaAAAAACCGTCCAAAAAAAGACTGTTTCCAGGTCCCTTAAA TCTCATGAGTTAAATTAGAAGAAAAGTCACTAACCTTgctttttcatatt ttagtGATTTCCAGTGAtgcaaaaaagaagaaaacagatgAAGATTTAGG GACAGGTATGTATGGGAGTATCATAACAAAAATGAAACACGTTTTAACCA TTTTTATCACCATATCAGCTGTCTTCATTAATTTCTTTACCCATTGACCA TTGACCCATTTCTTGACCCATCCTATACAATTGGAGAAAATCTAATAatt cttatttcaaaataaattcatcattttaataatatttaataaaataaaac taaattttttctaaataccTTTGGTGGGATCAACCTGTATGATTTAATAA TATTGCAAATTTCAATACATTTGGAATTAAGATTGTATATCCTTACAGAT CACAAATCAATGGATTTGGCTCATTCatagtgcttgaaataaaattcTGT ttcctacatgttttttattttataagcataacgtttataagcatatgtag gtttttggtacctaaataatgggtcttttgttttaagaacaatagaatgc taagcataatgtgaGCCTGAGAcagacagacacttgcttataaaagaaac atgttttACTTTTAAATCAAGCAGATCAAACAAAtatctttctttcttta cttTTAGAAACCCCCAATTTGTTTACTTTTGCTGGCACGATTGAGGAGAA AGAAAACACAGGTGTTTTAATTGTAAGTAAAGGACAATTTTGGGaatttc taaacatcgaccagaaatggcgaccacaaccggcgaccacgaccagcgac caaataaatttggattatcgagtttatctgctctctccaccgtagagaac gtcctaatcaagtcctcagaatactaaaaaatgacctttgaagtaaccac tcattttcttgacaaaaatattgacaggtcCATTTAAAGTATGATGTCTG TAAACTTTATTCCActgaatattttaattatgctgaatgagatgccttaA GTATAAATAGATAGAATTATTTAGTAAGAAAAACCAGTTTTGGAGAATCt gatcaattattctattgtctttatgctgaaaaaataactaattttgacag aaataatgatctgatggttaaatacaaaacttttcaaacaaatttcaata tattttgtgccattaattattttgatgctgataatacaGGATAGAAATTG ATACCCttatcaagctccaagagcgtcgaaatATTTGTTTTACGCATTAG GTATGTGACTATAATTAGATGAGACAGCGGTGAGCTTACTCTCCAataca atattttcaaatgataagGAGAGACACTATACGTTTGAGAAAGGGGGAAA ACTTGacaacccaaatttatctgatcgctggtcgtggtcgccatttctag tcaatgtttagaaactcccggacaatttttatttgattcttatttCCTAT CTTTTTGCCTTTCAAACATCTCAATTACCTTCTCGTCTACAGGACGTTAT TAGGAGCCCCTACTTATtaaaaagatttgaattttgaaactgtGAAAAGC AAATTCCCTTGTTTTACTCCAAGTATTTCTCCAAGTATTTAAAGTATATA TTTCATCCAATCTCTCCATTCGAACCCCAGAATAGTTTGGAATTTGAAAC AGTTGATAAGCATAGAACAATCTTTTTTTATCTGCAGGATAAATTCAAAC AAGGGAATTTGAAGATCAGTAAAACAAATAAGAAcgcaaaaaatcaaaga agGCAAACTGCAAAGGTTGGTATAGTTAAAAACTATTTATCtctttcaaa atagaaaaaagatcAGAAGCAATACTTCATTACGGCATACAATTTCCTTC AATATGTTCACTGTTTTTCATCACAGGACAAAATAAAAGCAGCAAGATTT ACagttgtttcaaataaacgagAGATCAggtgaatatttttgtcaagcAT TACATAATGCCACAAGATTCGAATGTATTTACGAGTTAAACTGGctgttt ttaaatctttaagaGTTTAGAATATTTAAGAAACGGATGAACTTTCAAGG AGCTGAGAAAATTTACAGATAAagctttttaaacatttttaaattgaaGA ATATTCCAGACTAACAATGAAACATGAGAAACACTTAGGTTGCTCATACT CATTcttcttattattattattattattattatttttgcagCGATTCATT AGCAGATGATATTCATCTAGTCGACGCGATTGCTACTGAAGAAGATTTCC CTCAAAATGATGATGAAGAAGCCTTGTTCTGCAATTCCGTTAAAATGATC cgtgaaaagttgaaaattgatgGTATTGCTTTCAATTTGTCTTCTTTATT TAGTTCTTCTCGCCTGAAGTAAATTTTTCTGCGTGGTTTTAATTCCAAGT CACATTCCTTTTTTGTTTACGATAAAAGATTCTTCAAAATGTACgagtaa aaactttttaattttttctatgaTACCTATGTTGAAAGTGATATTTATGA CTTTTTTCCAGACGGTAAAAGATGCGAAGAGGAAGATTTTGTTTACGATT TGTATTTTGCTCCTTCAAATACCATCATACTTAACGCTGATAGTGAAATG TAAGTATATTAAACGCCGAAAATAATACTCTCACCATGTAAGTATGTGAC AAGTGACTTTGTCCAGGTGAACCCGTCAAGTCCAATTAATTTGATATAAT AGTAAAATTGTATTTATCTTTGCAACTACTTGCAGTGTCTGCCAGTACTT CACCACAATCTCTTAAGGGATACACCCAATTCGATAGCAATTGGGAAACC TATAATTTTTAGCTTCTCCCAGAAGAGAATGTCTTTCACGACTAAAACTA AActaagtaattttttttattgataatttgttcttcttttctAATGACAA TATACATTCAATGTTTTTAAAGCCTACTTGCTGTTATGTTTGATGGGGTT TTCCTGACCCCCATCAACATATTATAGAGCTGCatagcttgtttttttat ttgtttatgtcTTAACATATGAGGGTTAATTTGATAATGTGGAGGGTTGT TCCTTTAGCACTCCCAATGCATTAATcacatcaatttttttatttagact TCAATTAGAAGAGTATTTCGAGCAAATTTATGTGGAAGACGAACACCTTG GAGATAGTGAAGGATTTTatgatgatgaagatgatgagaatggtttgttt gattttgcagtgttttgtttaaaagaatTTCTGCAAATTATTGTATGGat tttctatttcaaaacaCCCTTCAAACTTTACTGGGACGGGcagcttttta attttaggaGAATGGTAATGCATTTACAGGAAATGTTATCGGTAAAAAAT CGGTAAAAAATGTAAGATATTGAAGTGAGCAGTTCACACTCCACGTAAAA AACTCAATGAAATGCCTCTCGTACGGAAGTGCAGACTAAAATACTTTCCA TGTAAATTTATTACTAAAAAAAGCCGACCACGCCGCTAATATCTTATCTT GTAGCATGGTACTTATTCATGAGTTACGGCTGAATATTATTATGAGTTGC CCACGCTGTATTTGTTTTAGAATATATTATTTCATTTTATCGAtttctca agatttttgaaactaaTCCTTTGTGAAGTTTATTTTTAGAACGTACTTAT TGAAtgtgttttatttgttttcagcgGAAGAGAATTGGAGAAATgattat ccagatgaagatgaATATGGTTCCAGTGAACATGAAAGAGGTCTGTGCAA ATAATCATAGGCCACAGCCATAAACCTCCAGTTCATAGTTAGTCGTGCTA GTCGACCGTTGATCTCTTGAGCGAAACGACTATGCCTTGTCTTgtatttg ttaaatttttagttCATTGAATCTTTTCTGTCTGTGATGCCTGCGATGCC TCCACCATGGTTGGAGATCGTACCAACACGTCGGAGGGTAGCACCTACAA TGCTGTGCGAGAGAAACGTTAGAAGAATGtgattcaatatttattttatg tCACGTGTCAGATGATTTATatgaatattttaattttcagattcgTTCGA GAGTGACGAAGAAGAGGATGACTTCTATAGCAACAACATGTACCGCAAAG GGTAAGTTAACGCAATTTTTTTGTGGAAggttgggccattccattttata tccatacaggcgtgtggacgaacatttccaaggTTTCAAGAGGTAATCGC AGAAGAATTTCCAAAGGagtatttttccatttttccaggAGGTAAAAGGT TGTTCAAGGGGGGGgcaaagactgattttagtctgattttaaggtatgaa aagaatttttgcaagagttcttttgcaaatcttgccattttccagggagt ATTCACAAATTTCTAAGAATCTTTTTCGTCTAAGGTTcgttttttccccc cccccccccctatccCCCACCTGtatggaaaagcccattttgaaTTCGAG AAATTTAAAGATTTGCTTTCTTTTCCTTTATTTCACGAATGCTGAAAGGT TTGCACGGACAAATTTAGTAAcaacatgaaaatatttgacgCGCGATTTA GGTTTTTGGTGAAACGTGTATGAAacatgggccccggcgagccatttgGA GTGCGGGGTCCAATATTTAGGAAAATGTCTCTCACCATGGTTGGACgatg agaaaatttttcacaccTTCAAAACATCCTAAACCGTATTAGGGAGATAA ACAGTTTTTAAGATTTGATTTGGTCTGTATAAACTTGTTTTAATGTACAT AAGTATGGTCTGCAAAAAGGTTAGGGGCCATGAAAAGAAATGTATGGTTT GAATTTCCAGATCATAAAGATGAGATAttcttgttattttcatttaGGAA GGGACGACTAGCATTCGATCCGTACGCTCGCGAAGATATGAATGATTATT ACAACGCGTTGTCAGCCAGTGATCGAGACAGTGACTGATCTTCGTGTCTC ATTTATCGAAATATGATGGAGATAACGACGATATTGAAAGAGGGGTTGCT TTCATTGGTCTGTTATTGTAGTAGAACCACATGGTTGATATTCTGGAGAT AATCGAATTCGATTGTGGGAAAACACGTTTGTTGTGTACAATTCTTTGTA TTTGTATTTCAAACGAGGAACAAGGAATTGCCCAAACTTCGCAGACGAAC CTCGTCAATAAAATACAAACGGAAAGACTCTTTTTTCAGACAATACTTTT GGTACAACaattaattttttgtacaaCAATTTGTGCTGCTCCGACTGGCT AATCTAAGACTTTTACACCGGTTTTAAAATACCATTGTATTTATGTATGT ACAGTatcataaattttaaatttttttactcGTTATTAAAGATAGGAATG AAGATTTCCTTCAAAAATGATATTTGTTTTAATCTTTTTNTTTTTTCTCG TTATTAAAGATAGGAATGAAGATTTCCTTCAAAAATGATATTTGTTTTCA TCTTCTCGGAGTGTAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020152TCONS_00020152Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020152-proteinTCONS_00020152-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:67061..78478 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC7A6OSprobable RNA polymerase II nuclear localization protein SLC7A6OS Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.71 12.03 22.7 24.66 18.93 14.22 17.52 17.26 12.75 10.36 9.02 8.94 8.41 8.4 9.43 10.6 11.86 11.66 6.02 7.53 10.98 10.81 16.57 14.63 13.34 15.85 7.28 4.55 10.48 12.6