XLOC_011270 (gene) - C. hemisphaerica

Overview
NameXLOC_011270
Unique NameXLOC_011270
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:244301..249341+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011270 ID=XLOC_011270|Name=XLOC_011270|organism=Clytia hemisphaerica|type=gene|length=5041bp|location=Sequence derived from alignment at sc0000348:244301..249341+ (Clytia hemisphaerica)
taggaattctacaagtctgagccttcatatgcttataagcttataagcgt tatgctttataaaaaaaaacatgtaactttTCATTTGAAGGTCAAGGCCC ACAGTTATTGTTGGACAAGCTATGTTTGTGCTCAAAAACTAaaggtaaat aaattttgtaggaCCCAACATGTTGAacttccagaaaaaattaattctaa GAATATGTAAGAATGTGAATTGGTCTGGAAGAAGTACTTGTAATTCATAA gaagaattttaaaagaaattttgatcATTATTTTCATTCTCGAATTCTTT TAGCAGTCAAATCATCGTCTGATTGGATCACTCTCAATGTTGGTGGCAAG CTTTTCACTACCACAAGGTAGAAAGTTTATCGCTTTCTTTTGGATTCTAA AGTattgctcaagttttttcccTACAAGATAAGCACtgcatttttggaaa agctttttttttgatacaattttaaTACTTTCCTTTATACTTTACTTTTA TATTTATTCATATATTTACGACGTATGGCattcttcttttttagaaaCAC TTTGACACGCTATCCGGACACGATGTTAGCAAGAATGTTCAGCATATCAG GTAATTTATTGTTAtatttattcgggtctgtaaattttcaaacgaagcca agaaggaagacaaaatggcgccaggtctcttgagaagtaacaaagttacc ttcttcagtacctttggaaaaaaggctatgtggctgaagttcgaaaggaa tcttaacttttattacatggaatcattaacaagatgttgtaatagttatt tcAACATGAAAACagttttcagatttcaaaagtttaggcaaaaagaggta ccccataatctagcccaattggctaccccattggctaccctgctttttag accaacccgatCGTGAGTGAGGTGAATGGTGTGGCGGCCTTGTCATACAG TGTCACGCTTGAATACATATCTAATCCAATAAACTTCAGCTCTGTTCAGC TGCACGTTCAGTGCAgcaaaatcagcggaaaataacccatcatcattttt ttattaccgaaattcaaaatgaattatTGCAAAGAAATGCATACTTTTTC TCCTATAGAAACGTGGAAGAGTGCTGTAGACGCGAATGGAGCTTATCTAA TCGATCGAAGTCCAGAATATTTTGAACCCATCCTCAATTTTCTTCGGCAA GGAATTCTCATAATAAACGAAGGAGTAAATCAAAGGGGTGTTTTAGAAGA AGCTCGGTTCTTTGGATTGATTGAAATCGTCAATGAGTTGGAATCTGAGT TGCAAACCATTGAACGACAGAAGCAATCTGTTACACGAAGTGAATTTATG AGACTTTTAATGACAACTTCGAATGTTGATAAACTTCGATGTCAAGGTGT TGACTTGGCCGGAGCTGATTTATCTTACTTAGATTTGAGCTCAATCAATT TCAAACATGCCAACTTGTCAGGAGCCAATTTAAAAGGTGCTTCTTTGGGT GGATGTCAATTCAATTTGGCTGATCTTTCGAATGCCTGTCTTGATGTAAG TTTAGTCAGTCAGTCATTCACATGAAATTACCTATTCAGTTGGTAAGAAT TATATAACAAACAGCCTCTGTACACCACAAACGTTACATCAACCAATATT ATTAAAATTATCGTGCTTGTACACCACACGCTACTCGTTGTTTTGTTGTC GCAAAAAAAGAGCGAAGCAAGtgactattattattattagtggtcatcca tatagtacgtacgcaaaatttttcaaatattcgaTACCCCCTCCcacctt gtacgcagagaacaatataaatgacgtcatttaaacaatagatgtacgct tttgctaagcccccctctccccccttcactgcgtacgtactatgtggatg gcCCCTTATCGTGTTTGTTAGTAATTGGAATATTGAGTTTCGAGTTCGAT TTCTAAGCTTTTTAAAGGCTCTCCTGTTTTGGTTCTAGGATGCCACTTTG GAAGGGGTTCAGATGAAACGAGTGAACTTAGAAAGCGCGTCGCTCAAGAA TTGCAAATTTGAAGCTACGGGTACCAAGAACCAAAAGGCGAATTTAGAAG GTAACAATTTGTTTAATGAATATATCATCCTTTTTATTGCTCTCGATACG AAATCCTATTTTTCTTAGTCCACGTCAAGTTGATTAGCGGAACAGCcaaa tttttattctaattaGTAAAAGGAATTGCCCGTAggcaaatattttcaaa aattaacgaTATTCAAAAGTCAAATTGGTACGATTTAGGGGACCCTGTGC AAAGTTCCTTAGTCGAATCCACAAGAAAATTCTATCGGTTTCCATCAACT TCGATCATACTTAGAGTGACGTCATTTCCTTCCATTGTTCTTTCATCTCA ATGATCAGGTGCAAATTTGAAAGAAGCCTCACTGGAAGGAAGTCAAATGA GCAATGCGTGTTTACGGTTAGCTGTCTTAAAAGAAGCCAATATGCGAAAC TGTGTATTGAGAGGTGCTACTTTGGCTGGAGCGGATCTAGAAGTAGGACA TTGCTGTACATATAATACAATCTATAtctacaatcaaagtcataattttt gagaaaaaaaggaaatcctcacgaaatcttacaaccacaaacgatttggt agtgctctaaattaggttggaagggtagagttttaacaccttagaatctg aggatccaGAAGTCCAAGAAtagtccaatagggctcagaatatagcctga ttaaccaaaattctcaatttattttgaccgagattgtagAACAGGAACAT GGTATCTTATATCCTTAGTGTCgttagaaaaatctttttggacctaccat tagattttttctgacttttggcACAAAGTTGCAAATAGCAATAGCCGACA TATAACAGAGCacgattttcaataaaatcttttgtcaaatttttccgaaa aaaatatttttggttaaaATGCTGGAAATGACCGAGTTTTCCTATTTTGT GTACAAGAACAGTCATAGTAATAGCCGGCGTAATCTAATAGTTAACAAAA TGCACACCTTTAAATGAGACCATGACTTGTAGTATTAgattttatgataa aaataataGTTTTGTATAAATCGTTTTTCTTTAGAATTGTGATTTAACGG GAGCGGACTTGGAAGGAGCCAACCTGAGAGGAACGAACGTAGTGGGGACT ATATTTTTAGATATTGTGGCGCCTCTTCATATGGTCCAGTTCGAAGGTCC TCAGTCCTGAACATGACGCGATACGGAGGAAATTTCTTACCGAACGGACA CATTTTCCAGCAAATGAACTAAATgtgttttaaatttctattgaaaNTGT GGATGGCCCCTTATCGTGTTTGTTAGTAATTGGAATATTGAGTTCCGAGT TCGAtttctaatctttttaaagGCTCTCCTGTTTTGGTTCTAGGATGCCA CTTTGGAAGGGGTTCAGATGAAACGAGTAAACTTAGAAAGCGCATCGCTC AAGAATTGCAAATTTGAAGCTACGGGTACTAAGAACCAAAAGGCGAATTT AGAAGGTAACAATTTGTTTAATGAATATATCATCCTTTTTATTGCTCTCG ATACGAAATCCTATTTTTCTTAGTCCACATCAAGTTGATTAGCTGAACAG CCaaattttttattctaattAGTAAAATGAATTACTCGTTGgcaaatatt tccaaaaattaacGATATCAAAAAGTCAAATTGCTACAATTTGGTGGACC CTGTGCAACGAATTTTACAACAACAAACTCCTTAGGGgccattcaaaaaa attgaatggcCCCTTAGTCGAATCCACAAGAAAATTCTATCGGTTTCCAT CAACTTCGATCATACTTAGAATGACGTCATTTCCTTCCATTGTTCTTTCA TCTCAATGATCAGGTGCAAATTTGAAAGAAGCCTCATTGGAAGGAAGTCA AATGAGCAATGCGTGTTTACGGTTAGCTGTCTTAAAAGAAGCCAATATGC GAAACTGTGTATTGAGAGGTGCTACTTTGGCTGGAGCGGATCTAGAAGTA GGACATTGCTGTACATATAATACAATCTATAtctacaatcaaagtcataa tttttgagaaaaaaaggaaatcctcacgaaatcttacaaccacaaacgat ttggtagtgctctaaattaggttggaagggtagagttttaacaccttaga atctgaggatccaGAAGTCCAAGAAtagtccaatagggctcagaatatag cctgattaaccaaaattctcaatttattttgaccgagattgtagAACAGG AACATGGTATCTTTTATCCTTAGTgtcgtttgaaaaatctttttggacct accattagattttttctgacttttggcACAAAGTTGCAAATAGCAATAGC CGACATATAACAGAGCacgattttcaataaaatcttttgtcaaatttttc cgaaaaaaatatttttggttaaaATGCTGGAAATGACCGAGTTTTCCTAT TTTGTGTACAAGAACAGTCATAGTAATAGCCGGCGTAATCTAATAGTTAA CAAAATGCACACCTTTAAATGAGACCATGACTTGTAGTATTAgattttat gataaaaataataGTTTTGTATAAATCGTTTTTCTTTAGAATTGTGATTT AACGGGAGCGGACTTGGAAGGAGCCAACCTGAGAGGAACGAACGTAGTGG GGACTATATTTTTAGATATTGTGGCGCCTCTTCATATGGTCCAGTTCGAA GGTCCTCAGTCCTGAACATGACGCGATACGGAGGAAATTTCTTACCGAAC GGACACATTTTCCAGCAAATGAACTAAATGTAttttaaatttctattgaa aataCTCCTTATCTCGAAGGCAGTTTCGTAAGTAAAGACAAGATTTTCCG TATCTTTAGAAACAAACCAAATCTCATGTCGGTTATCCCGTGAGAAATCC CGGAAAAGTCGAGAGAATATTTCGGGAAATGAAACCTTATGCAAAACGAC AGTAAGCTTTCAATAGAAAACAACTTTATCTCGTATATTTN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020052TCONS_00020052Clytia hemisphaericatranscript
TCONS_00020053TCONS_00020053Clytia hemisphaericatranscript
TCONS_00020054TCONS_00020054Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020054-proteinTCONS_00020054-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:244301..249341 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KCTD9BTB/POZ domain-containing protein KCTD9 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.67 13.4 8.33 8.2 20.69 18.04 26.17 28.04 26.44 31.16 45.33 18.22 20.07 19.8 17.18 19.02 23.81 19.78 16.14 19.47 21.3 20.16 25.26 31.25 23.61 25.08 31.48 27.72 23.04 20.27