XLOC_011075 (gene) - C. hemisphaerica

Overview
NameXLOC_011075
Unique NameXLOC_011075
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000333:122501..127043-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011075 ID=XLOC_011075|Name=XLOC_011075|organism=Clytia hemisphaerica|type=gene|length=4543bp|location=Sequence derived from alignment at sc0000333:122501..127043- (Clytia hemisphaerica)
NNTAACATATTTTGACAACTGTGACATTACAAAAGGTAAATTTAAAACTT
AATTTTTACTTACTGGTAACTTTGTAAAAGTATAACTGCTTTGGTGTGGC
AACAATTTTTACCTAGATACACTGCCACCAAGTTTTCAGAGCATGTCATG
GCTGCCCCCAAGGAAAAATTATAACATTAAAATCCTACCCCTAAAATCTG
TGAACCCACTCAAAAAAGCTTAAAAAGCCCGAAAAAGTGACAAAATAGGC
CAATTTTCAGTGATGTTGCCCTTGAGACTTTAAAATTATCAAACCCAGGG
GATGTCAATCGAAGTGACCGAAGTCGATCATAAGATGCTTTTTGTTCCAG
ACGGTACTAATCGAAGGACCCTCCCGGCGCTCCGGAAACATCCGGTGCAA
AAAGTGCCGTTTTTTTCGTGCACCGGAACTTTCCGGTGCTTCCGGTGGAA
GAATTCTCCGGATCGAGCTGCACCGGAACGTTCACGGTACGGTGCTTGGT
GCATGATTTCCGCGATATAAATCCGATAGCGCTCGCTGTGCTAATCATGT
AAAAAGTAACTATACGCACACACGAATAATCCAAACGATGTTCCCATGTG
TGATGCGGTCGTGGCTTCTTCATAACCTCGAAAGTCACATCCTGACTTGT
TTCGTATTTTCCAGTCTCTGATTTGATATTTTTCTGATGTTCTGGGACTT
TGTGAGTTAGGGGTCTTCGACAAAAAGCTTTCGAATTTTTTATCGGCATT
GGGCCGATAAGCTTCAGACCCCCTCCCCCCTTGCTCTTATCGGCCAAAAT
TTTTCAAAACCAACTTTTTACACCTTCGAAAACACAATTTTCTCCAATCA
TGTCCGCCATCGCGTTGATCTCGCCTTCCCACCTTCCCACCCGTCATCGT
TGAATTTTTGTCTATTTGCACCAACATTGAGTCTGTTCATACCCGCATTG
ATATTGGTAATCAAAACGAAAGTTAAAAAGACGCGATGAAATCGCAACAT
TTTGAAAGGAAACGGCAGCAGGCTGGCCAATGAAAAAAGAGTTTTTTTAT
CAAAGCTTATTCAAAACTGTACTGTACTTTTAAAGTTGCGAATTTGTGCG
CGATGGAGAAAGAAAGTGAAATTGTATGCTTTCAGTGGAGATTGTGGACG
AAATCAGAGAGAAATTGGCTGAAAAGATTTTCGTCCCAATACTTGTTTTT
TTATCGGTATGTAGTTGGACCCCCCCCACCCCCTTATCGGCCCAATGCCG
ATAAAAAATTCGAAAGTTTTTTGTCGACGATCCCTTATTTTCTATGTTTT
TCAACTTGTTGAATGCTTGTTGAATGACTTACCGAAAGATCACCACCGGT
GGGATTCGAACCCACTAAATGCAAAGTTCTGTTGATCAGAAACCCAATGC
CTTATCCACTGCGCCACGGATTCATGCCGGACTATANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCACCTGAGA
GTACACAGGTTCATGGTTGATCGAGACAAAAGCTGGTGTTTATTGTTTCT
CACTTATTTTTTCAGATTTGCAACCTATCAAACGTGGTACTACAAAGAAA
TTGATCCCTTCAACTATCTTGATTCCAAGTGAGTAGCAATGAGAAATACC
TTACATCAGATGATCGGCCGCAGCAACACAAGCTGAGTTTTTTCTTTACA
ACTGTTTACCTTATACAAGTGTCCGTGCGGCAAACTTAAAAGTACATATG
CGTTCGTTAGGTTTTGAATTCGAGACCTGATGATGTATCTCCATTTTCTA
GTTTGCCGTGCAGACACTTATATAGCTAACAGCCATACAGAAAAAAACTC
AGCATGCGTCACTGCGGCCGATCAGCTGATGTAAGGTATTTTTCATTATG
TAATTTCTGCTGGACTACATTATTATTTAACAGAACGTCCTTTTTGAAAA
AATATCTATTTTGTGACTATGTTTTGATAATAGCAGAGTCTGTTTCCAAT
GCCCATAATAGTGACTTAAGATTTAATCAATCTTTTGCTCAAATACACAA
TACTATCAATTTTTTCGTGAAATACTGCCATACTGTTAGAAAAAAAAAAG
CTTGGCCCTGGTACTAGCTCTTGGAGATCCCTTTTGAAATTTTGTATACC
TTTGCATTATGTGATTATGTTAACCCTTTGAGTGCCAGGGTCCTTTTTTC
TAAGTTTTTTTAAAAAAATCGCTAGTTCAAACTTTAAGGGCTTATATCTC
CTGATCTAGAAGGAATTAGAAGCTCGTATATAGCTCGTTGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TAACGATTTCTAACTCAAACTGGGCATTACAGGAGGGCTTCGCCCTCCTA
TATAGCCCATGTCGTATATATACGACATCGGCACTTAAAGGGTTAAAAGT
CGCAAAGTTTCATGAGATTTAAAAAAAAATTAAGGGAATTATAAGCAAAA
AACTGACAGGGTGGTGTAAACCCCCCCCCCTCCGATATAAATACCAAATT
TTATTCAATTTATTACTCTTCCTTTATTTTTAGGATTCGACAACTAACGT
GTTGGTATCACCTAACGTTTCGGTATCATCTACGATTAAGCCCCCGTCGT
GGATTGTTTACCCCCTATTCATTCAGCCAAAGCCATAGCCAAAGCCAAAG
CCTTTTACTGCCTAATTTATTTAATTCATAATTTATTATAATTGTTTGAT
TATAAATTGAAATCTCTACGAAATTTCTGTTGCATTTTACATCCCTAATA
CACCGTTTAATAAGATGATATCTATCGAAGCTTATCGGATTTCGATCGGC
AACTTTGATTCTACCAGGCAATTTAACCTTCGTTCTATATATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019675TCONS_00019675Clytia hemisphaericatranscript
TCONS_00019674TCONS_00019674Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000333supercontigsc0000333:122501..127043 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.65	2.17	0.63	2.5	7.18	5.5	8.01	9.15	10.59	6.84	10.46	8.84	8.82	9.89	2.67	2.12	3.26	5.54	3.03	5.95	9.29	8.55	5.53	4.3	5.73	6.92	20.31	15.58	11.52	11.01