XLOC_010978 (gene) - C. hemisphaerica

Overview
NameXLOC_010978
Unique NameXLOC_010978
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000329:270633..280909-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010978 ID=XLOC_010978|Name=XLOC_010978|organism=Clytia hemisphaerica|type=gene|length=10277bp|location=Sequence derived from alignment at sc0000329:270633..280909- (Clytia hemisphaerica)
CAAAAATGGCTGAGATTTTATTGATACTTTTGTGAAATTTATTGGTACTA
TAAATCAAATATTTGATTTTGGGGCATGGCTCTAATTTGACGAATCTGTC
ATGTGACTTGTGATTGGGGATTGAAACTAGTAGAAGAAAACTCCCGGAGA
TAAACCTTTTTAACACAATGAACGCTATATCCATTGTTGTACTGCTTGTT
TGGTACTCTGGCTTGTTGAATTGTTCAACCCATCATTCCACTAAAAGACA
TTTCTCAAAGCGAAGGCTGAAACCCATTTCAAATCACATAACTGTCGAAA
ACGTAAACCCTTATTTTAACAAATTCAAATACAAACGATCTCGAAATGGG
GCGGATGTTGGAAATTTTGCTAACGACTTGGCAGGTGATATGTTCGGTAT
CCACCCTCAAGATTCGGTTCGTTTAATGCCGGATGAACGTAATGGACCTA
TTGGGAAAGCAACCGAGAATTTCGTTGACCCTTTTAATGATATGGTTGAT
GAACCACATTTGAATCAATATGCGTATAAACCCCAGCCTAAAGATTACAG
GTTAGACAACAATGTGGTAAAGGAAGCTTTCCAAACGGAACCGAAAAGCT
ATAAAGTACCGTTAGGGCCTACTGAAGATGAGATGAAGGAGGCTTATCAG
CCTGAACCTAAAGAGATTAGAGTACCATTAGGGCCTACTGGTGATGAGGT
ATACTATACAACAAAGGATTCTGTTGGGACACAAAATCAGCCTTCTGCCG
ACAGATCAATGTCTGCGAGTGATATTTTTCACGAACAGGCTAGTCTACAG
GAGCCTCTTAATTCTGAAAACAAAGGAAATGTTCAGGAGCGTAAAACAAG
CGTGAATAAGGCTAAAAAATCTGCATCGAAGAAGAATTCTAAACCTTCTG
TGAAGGAAATAAAGAAATTACTACAAGCTACAGACAAAGATACAGAAAAG
GGACACGAGAAAGGTAAAATGTTGAAATATATTAAACAGAAACATAAGAA
AGAGACCAATAAGAAAAAGAAGAAAGTGGACAACAAGCAATTCGCTTATT
TAACGCTGCCAGATACCCAGTCTGTTGATATCACACCAATGAAGCCGAAC
CCAGAAGAGGATGATAGAGAAGAATTCACCAAAGTTGAGGGTGATTCTAC
AAAAACTAAAATATACGCAATGACTAATAATGAAGGTAACAAAGCTCACA
ATGAGCCTGAATCTGATCAAAAATCACCTCAAATAGAACATAAGGCACCA
TCGGAATATGCTCCTACCACAGAGGTTGACACAACACCACCTTCTGAAAA
TGCTGAAGTTGTGCCTTCAGAAGTTGTAGAGGTGAAAGAATCACCTGAGG
ACCAGCAAGTGAGACAAGCTGGCGATGAAATGACGACGATTGTCAATACT
GCAACAGAGTCACCAACAACCTCCAAAATCACCAATAATTGGATCGCTAT
TGATAGCAATAATTCAACACTAAATAGCCAAGCAATGCTAAAAAATGAAC
CAAAAAAGGAGACATCTGCCGTAAAGAGCGAGACTGTGTCTTCAGCTTTA
AATGAAGGTTCGCCAGCTTCTTCACCAAACTCCATTCATATGTTGGATCA
AACAAAACCGGCCCAAGCTCCTTTGCCGCCAGCTCCAAGACCAAACAAAG
TTATCGATATCAAAGAACCAGATTTGAATGTTTCCATTTCTTTTAACACG
TAAGTCAATAAACAACCTTTATCATTCAATCATCTTGTACACACCTGTAT
CACTTGACACCTCTGTATCTTTTGACTCCCCAATTTAACACAACTCAACA
ACTCATGTATTTTTCATCAACCCCTGTATCTTTCAACAATCATTTGAATC
ATTCAACAACCCCTTGTACCATTCAACACCCTCTGTATCATTCAAAACCA
TCAATATTATATTCAACGGCCCTGTATCATATTAAATGCCCCTGTTTTAT
CTTAACAGCGTCATAACATTCAGGATCTTAGTTAGCACTGTACAACATGC
TTGTATTTTACAGAATTTTGGCGATAATTTTTCGATAAACAAAAGAAACG
TGAAACTGCCTTTAACTTTCTGAAGCTTATTTCTCAACTACCTTGAGTCC
TGGTTTTTTCCCACTAGTAAAGTGACAGTGAAATCTTAGGCTGGGAAGTG
GAAAAACGACGGAACCGATTGACCAACTGATTACCATTTCTCTTGATATT
TTTCAATAGGACTGACAACCAAGATAGATCAGTGGAGAGGCTTGAGAATG
TCATTAAAATGGTGAAAGGAATGAAAGATGGTGGAGAACCGAAACCACAA
CAACAACCACAACCATCAGCTTTGGTTAATCCAAACAAATTATTTTTGAA
GGAGGAGATGGGAGAAACAGTTGGTGAAGCCAAACACGTCGTTGAAGTTG
ATCCGTTGAAAAGGTACTACTTTCTTGAAAGGTAGTGGGGGATGCAGAAC
GTCGGGTATGTGCGCACCGGATCTCTGGAAAGTGACCCTTAGAAATATTT
CCTTACATTAAAGAGATGGCTTTTTGACTTTCTTCAAGCGTTAGTGGGGA
ACACTAGGAATTCTGCGGTAACTCAGCAAAAAATTGGATGATTACGCATC
CCTTTCGAAAAGTCCAAATCACACATCAAAAAATTCTCAAATCACGATCA
CGTTTTGATCTCTGATCACGCAATCTCGAAGAAAAATAATTCCAAATTAC
GTAATCACGCTAGAAAAAAGTCCCTCACGACATCACGCAAACCGCTCGAG
GGGCATCTACTAGGGATCTCAGGAAGTTGACCCTGAATAAAATTCTCTAG
ATAAAAAGATACTTTCGAATCCTCGTGGCCTTTGTACCCTCAAAAAGACC
CAACTCCTTTCAAGTAGGCCTAAAACGGCTAAAATCGACCAAAAGCAGCA
TGAATTACCTGCTTTTTATCTAAGAAAAATTTGAAAATCTAAAATCAGAT
TTTTCAAATATCATGATTTTTTAGCCATTATAGAAAGATTCTTTTCTTTT
TTTCATCTTCATTTTTCTCCTTTAATTTTCGATATTTCGAAATTCTTTTT
TATTGACACCTTTTAAATTAGTCTCCCCGGAAATATCTTTCCAATGGTCT
ATAACTTTTAAATATAGCATTAACTAGACGGTTCCCGTCGTCGCAAACGC
CGGTTTAGCTTGCGCATCAAAAGCCCTTAGGATGATAAAGATGGTATTGT
TGATGCTCTGTAACTTTATTTTTAAGGGGAAATAGTAAGTATAGTAAGAT
ACATGCCGAGAGGAATTGTCAAAAAGGTCAAGTGTCCACATACTTTTGAG
ACAGACTTTAAGTAAACTTTTTCTTTCAGTCTACTGGAAGCAGCAAACAT
GAAAAACGAATCACGAGCAGCACCAGACAAAGATTCCTCGTACGTTATGC
ACAAAGGAAGCCTTTATAAAGTAACCAAAGTTTCACCAGAAGAAAAAACC
ATCAACAATGAACCTTTCAATAGTCTTGCTACTTTGAAAAATGAACCTTT
CAACAGTCTTGCAGCTTCAAATACTGAACCTTTCAACAGTCTTGCAGCTT
CAAATATTGAACCTTCTAACAGCCTTTCAACTTTGAAAAATGAACCTGCT
TCCAATAGTCTGGAAGCGTTGGATAACCAACTTTCGAAACTGGTTACGGA
TACGGCGAATCGAATGTCCATGAATCAACCTATTGATAGGTAAGTAGCAA
ATTTTGTGATTTTGAGTATCTTTATGTTTTACAAGTACTAAATGAATGTA
CGCACCATTCATTCTACGTCGGGCCTTTGATGACCTTGTTTCTGGGCATG
GGGTAGATTAGACTATTGTCTAGTTCTGGCTGAAGTTAGACTGTGCACAT
CCCCAGAATTTTGAAATAGCGAATACGTGTCGTGTATGAAATTCTCGTCC
GTGAGTTACCCCAAATTTGGGGTAACCGCAAAAGTTGCAAGAATTTACAT
AATTCCAACAAATTCAATCAAAAAAACAAAAAAATGAAGTCATTGTTTCG
ATTTTCTTTACGTTTAATTTCAGGTTAGACGAATCAGTACCAAAATTCAG
TTCAACGGAGGTAAAGAATAAGGGAAAAGATAAGAAGACAGAACACTTGA
ACATCGAATCCTTCCCACTTAAAGACCGGAAGAAGACAAAGAAGAAGAGG
CCGACGGGTGGAAAGGAGAAGGAAGCTGAAGATGAGAGGGATACTTCCTC
CAATGAAGAGGATATTGAGGGTAAAGTTGATGAGGAAGACGTGACAAAGT
CTGTCAGGAACAAGCATTTAAGAAGGAAGCAACCTGACGCAAACGAGAAG
GATGGAGATGAAGAACAAAGGGAGGAGGGCAACAGACGACATCATCGAAG
GCTGCGGCATCATAAAGTGAGACTAAGAGCAGGCAAAAAGAAACATCAGT
TGTCGAATGAAGAAGCCGATTTAGAAGAGGGTGAGGATGAGGAAGACTTT
GGTTTGGAATATCATGACGAGGATGAACAGGAAAATGAGAAAGTTCCCTT
CCCAACAACAAAGAAGAAAGGAGGGCGAAAAAAGAAGAAAAAGAAGTTTT
CTGATGACGAAGAAACAAATGAGGTACGATAATAAGGCCTTTTCATAAAT
TATTTTGAGAGAAACGACTGCCTCGTTATGGAACCATTACCAAGGTGATC
AAATCTCTTGAGGCGTCAAGGGAGAGTGAACTTCTTTTGACCTCATCTTG
GAATCAATAACCATTGCAATATTTTGAAAACGAGGTAAGCGTTGCTTGTG
ACGGTAAATTATGAAAAGGTCTATTCAGACTGGAAACATCGGGAAAATCT
TGATGCTGCTCCCTGAAAGAACACTTTAAGGAGAGTTTGTGATGAAAATT
TTATTTTGGGTGTTCTCTGACGTTTGGACTTGGTTTTAGCACGTGCACCC
GTGAGGTTAAGTCTTATTTAAAGCGGTTCTAGGAAAATTGCCCCCGAGAA
AATTGCCCCCCGGAAAACTGCCCCCGGAAAATTGCCCCCCGGAAAATTGC
CCCCTAGGAAAACTGCCCCCTAGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAGTTTTCTCGGGGGCAATTTTCCTGACACCATTTAAAGC
TTAAAGAAGCTTAATAAAAAATTATCATTATATAGGGGTAGACACTTTCT
TATAAAAAAAAAACATGTAAATGTGCTTAATACTTTTGTAAGTGTTTTTG
TTCGTTTTCCTAAGAAATTCGGTCTTTTAGGGTCCGCAAAGCCTTAAAAT
GTCCTTAACTTTTTCTTAATATTTTAGCCATCGAAGCCTTATGTTTTTAT
ATAATTCGTTCTTATAAAAAAACCGGCTACAGTGTGCAAGGTTGTGGGTT
CAATCCCCACCCGGGTCATACCAAAGATTCTTAAAATGGTACTTGAAACC
TCTCTGCTTGATGTTCAGTAATTAAGTGGGTAAGTGGATCAATCCAGGGA
GAAAGAGTGGCGCCCTCCCCTACATTCGGGTAGATAGCTATCGAAAAAGG
AGCCTCTGAGTTGCCTCTAACAGTAGTCGCAGACTTACTTACTTACTTCT
TACTGATGGCTGACAACTTTGTACTTGTAGCTCTTTATTACTTTATAACT
CCTTATGTAGTCAACCAGCGAAGAGGATGATGAAGAATCATCAATGCATT
CCAAAAAAAAGAAACGAAAACATCGTTTTGACAAAGAAGCCAACGACGAA
GAAGACATGTCAATTCACATGCTTGATAAAGTGAAAGGACATGTGACGTC
AGATGAGGAGAATGAGGGACTTGGGGAGGAGAGAGATAAAGAGAATGGGA
ACAAGTTACAAGGGATGGAAGATACAATCGAAGACTCACATCTAGAGGTA
TGAGTGGTATATAAATGTTTTTTATTTGAAGTGTTACCATTAGGTAAATG
TGAGATTTTCAGCATTTGCCTTGACTGACATATTAATATCTTCGGGCTGA
TCCGGATAATCTGCCGGGATTTGCACCAGTAAGACTTTTAAGTTTTCAGA
TTTAGGCTCATTATTTTCGAGATATGTTAGATGTTCGTGTATACTCAAAA
GTGAGGGGATGTGGCGAACTAAGGACCATTTGTCTAATGTCGACATCCCT
CTTCTAATCCCGACACACCTCTTTAGACAAAAATAAGAAAGTCGGAATCA
CTGGTAGACAAAATATTTTTCCTCTCTAATCACTAAGTAAAGAAATATAA
TTTCCATCAGCGACTCCGACCATCCTATTATTCCCATCTCTAAAGAAGGG
TGTCGAAATTAGATGAGGGATGCTGACCAATGAAGTAAGGGCTAGAAGCA
AATCTTCTTGTTAGTATTTGAAGCCGCCAAATCCAACCAAATTGCGTGGA
CTTGAGTGGGCCACGTTTTTTATACAAATTACAGATTGAAAGTAAAATTC
CCCACTAAATATAAAAAAGCATACGACTCGCAAACAAAAAAACCACGAAG
TTTAGTCTGTCGTCAGAAATAGGGCGTATATTCTAAGGCTTCACTTTTTC
TTGTCTGAGAAAGGTTAAAGATTCGCTTCTAGCCCCTTCGGACTTATACT
TCATTAATTGATGCTGACATAAGACCAATTGTACTACAAATATTTTGGAA
AAGAGTTCTCATGCTCTTTCAATCAATTTCCAGGAGGGCAAATCTACCAA
AGATTATGATGAGAATTTTGAAGACGAATCAGTTGCCAGTGTGATCCAAA
GTAAACAAAAATCCAAAAAATTGTTTGGTGCGTCGCTAAGGAGATTCAAA
ATGGCTCATCAAGCTGCAGCAGCGGTGACGGGAAGACAGAGAAATATGAC
GTTTTTTGTTGATGATGGAGATGGTACTGATGCGATCATGAAGACAAAAT
TTCCTGTCAAAGCTGGTGAAACGATTGTGATGGGAGAGAATTTGAGCAAA
AGCAAGTAAGCAGGATTCATCCATAATAAAGTTTTTTTTCACAGGTTGAT
TTATAATTTGAAGGCTTAAATTTATCAAAAAGCTGAAAAAAGTTCAACTT
TTTTAATCCGTTACGTCACCGTCACCGTTTTTTAACCTTGAAACAATAGA
ATTTCTATCCCCATTGAGATTTCAATAGGAGTTTTTATCGCCTCCGAGGA
AAAAAGTTCCACCGGGGCTGTGATACAAGAGTGTTCGAAATAACTCGAAT
AACTCATTGTTACCAATCTTTGTTTTACACGTAGGTTGCTTGAAAAATCT
TCACTATCTGTAGCAACTTCATCAATCAACTCATTAGACCCTGGTTACAC
TATCAAACTGTTTACAAATCCTGAACAACACTCACGAACTTATGAGATCA
AACATGGTAACAGGTTTTATGCTGTGGTCGAAAGTGATGGTGGTCAAGGT
GAATCTAAAAGTAGCTTGGTAAATCATGAAGTCTTTGAAAATACTGCTGG
ACCAGACCCAGAACCAACAGCTCTGGTGAATACAAAGCCTGTTGATAAAC
TACCTTTAATAGCAGAACCTAAACAAGGTTCGATTACCAATAATACTGCT
GAAACGACTTCTTTGAATAAAACAAATCTCACGATACCGGCCCACAAACC
ATTGACAGAAACAAAACAACAATCAGCTATCGTTGAACCTTCACTTGCAA
AACCAGATCTGTCAGTCGCTTTGAATTCACTCATCAATCAAAAAGGGAAA
GATGTTCCAATAGATGACAAAAAGCAACATATTGTAGCATCAGTAATTCA
AGAGGAATTTAAACCTCAAACATCTGAAAACACTGGTAATATCGACAAAG
AGAAATCGGGAGCACCGTTACAGTCTGGTGCTAAAATATCCTCAAAAACT
TTCGATGTGATGGCTACTGAGGGTGTCTCTTTAATGAATTCAGGTCTGAA
TAGACTATCAGCGTTGAAGACTATAATTCCAGCATTGATTGGAACGCGAA
AAGCTAGTCTGCCTGTAGACCCTAAAATAATGGAGCGTAAAGATTCACCA
ACGAACACTTTGAGTCGTGAAATAAAGGGAGTTACAAGTTTATCACCGTA
TAAGGAAAATAAACCTATGACGCCGTCTGATGACTTTGATAAGACACTGA
ACGAACATATCGTGCTAAAATGAAAAATTTTATTGAATTGAAATCTATTG
GATTGGTAAATTGATATAAAGCTTCTTGTTAAAGGAGTGATGGGTTATAA
AAGGCGACGGAGCTAAAGTGTGTGACCGTTTTTGGGATCTGAGCAACTAT
GGTATTGGTGATCATCATATTGTTGATTGTTAACCCCTGTCATTGTTTTT
CATCGAATAAATTACCAACTCAGTCGAGATAGATAAGGCAGAAAAACTTG
GCTCGATTTAACATTAAACCTTGATTTCGACTTTAAAACGTTAGAGGAAC
ATTGGAGATAATATGGTATCACAACAACAAAAAAAACACTTTGCTACTAT
CTATCGATTTCACTAAAGATTGCCATCCTGGATGACATGAAACTTTGAGT
ATGAAATTAAACTAAATCGTTTTCTTTACTCAAACTAGTATCTATCAATT
CCTAGATTTAGTGGACGCAGTGATTCATTTCATAAAAAGCAAGCTTGAAT
GTCCATCTTCTTTCTAGCTGCTGGATTTCTTCATTCTTAACATTTAGAGT
GGGATAAAACAGCAGAGAGGGTCCGGAGGGTTATAGTAAATGTTAAAGTT
CTTTTTGTAAATATTAATAATAATAATAGGTTTATTTTCATAATTATGAA
AAAATGAAATATTTTACTGGAAAGTAATAATACTTCAATTCCGTGCCCAT
GGTCTTTAGGCAGTCAATGTCAGGCCTTTTGACCTTCATATTTCGACACT
AGTGATTTACCCTAAGGTGATTTTTTTTAAAGATTTCTAAAGTATTATCG
ATTTTTTTCATAAGAATAGTGTACTTTGGATGAGGGTCAAGTATTCTTAA
GAAAGTGCCAAAATTGAGGGTGAAATATTCTTAACGTATTCTTACTTTTT
TAGACTTGACTTTTTTACAAACATGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019536TCONS_00019536Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019536-proteinTCONS_00019536-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000329supercontigsc0000329:270633..280909 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01	0.04	0	0.02	0.39	0.47	4.86	4.99	0.52	0.49	3.56	2.39	4.81	3.82	2.89	8.44	3.62	3.35	0.02	0.05	1.57	1.63	1.31	1.58	3.51	4.29	0.45	0.15	0	0.01