XLOC_010714 (gene) - C. hemisphaerica

Overview
NameXLOC_010714
Unique NameXLOC_010714
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000319:334007..341108+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010714 ID=XLOC_010714|Name=XLOC_010714|organism=Clytia hemisphaerica|type=gene|length=7102bp|location=Sequence derived from alignment at sc0000319:334007..341108+ (Clytia hemisphaerica)
gtatttgTATCAAAATGCATGCAATGATTGTTGATTTATAAAGTTCCGTA ATTGTCTTCAAACGAGAGGGTTAAAGTATATAtatgaaaagataatttca cttttattttccCGATTATTTTTACCTTGAATGGGAAGATTTAGTAGGtg attttcttacttttacacTGGTCCAGCACTATTTCTCTACAATTATTAAG TGTTCGAAAGACTCAAGACACCTTTTTAATTATATGTAGAACAGGTTAAA TATCACTTCGATAAAACTCATTCCGTTCGGCGGTCAAAATGACTACCCCG TGTAGGTTATAATGACACTGGTACCTCCATATATCAGCTCCTTATGAAGC TGCAAGTTCTCCGTCGTATAATCCAAATAATTACGATTTGCCATTTTTTA ACATTATACAATTGTCTAAACATACCCACAAGTAAGAGTTCCAGATTTTG ATTTGCCATTTTGAGTAACTGACTAAATCCCAGTCTTTTTGAATAAGAGG AAATTGTGTCCAGACTACTGTTACAGAACTGTTTCAGTAAATGACTCTGC CCGAAAATTAAAGTCATTTTTTACAGTATACaatttgaaaatggaaaaaa agagcTGTATCTTTGGATGGaataaattagttttttttcacagtgataac cCTGTGTAGGTTATAATGACACTGGTCTTGCCAATTTGCCAGCTCTTCTT GAAGCTGCAAGTTTTCCTGATAAATAGACATAAATGATAAGAAGTGGTTA GTGGTGGAGCATTTCTCAATCATAATATATAGCGGGTCAGGAAGCTGATt tgccattttcttttttttacgaattttcaatttattgtaCAAAAAGAGCC ATCTTTGGATgaaatagattttttatttttttttcacagtgataaccctc taagattgaaaatttcttaGACTAGTAGCAAGTGTCTGCTTTTCCTTAGA CACGGATAACGATGTGATTAAAAGCCTAAAGATTTCATGAGAATTTCGCG ATCATAGAAaaattcatcttcattttctaaatgttttttattatcaaaag tgacaaatttttgtcttcgcggtagtctgaatcgcaggtCTCTTCACAAC CTCAGGTAGTCTTGATGCTAATGAGctgttataaaaaatattgtttgata atttccataaaaaatattgtttgaTAATTTCCATGCCCTGTTAACAGATC GATTCAACAGTTGAATCGAAATTTTGCATAAAGATAGAGAAAATGCTTAT TTTTCACTTCCAacaatattttattatttaattttaagaaatattgaTAA CGTCAACAAAGAAGGTCAACGATGAAACATAATTCTAGCTCAGCACTTTA AAGAGTTTATAAACAAGTGAaattttacttaatttctaCAAAATGGGGTG GAATAATTGGACAACgaaattttccatattttattgCCACTACATTGAGT CTTAACATCCCAtaaggatggcattcatagttTCATACATGAGGAAGACG GGAAAGCACCTTATTAAGTGTCGCGGgcttttcagtattttagttccgcg aGGCTCTGTGGGAGAAAAGGTAAATTCCCTTACCCTGATACAGGTACCAA TGTGGTGCTCCCCCATTCCGGCAGGGTACTAGGAGGTGTGTGTAGAGATC CTAAAAAAACAATGAGAAATTTTTTGTTAGAATCAAAATCGTCAACCTTT CGATTCAATGTTATGTTATGTTCCAAAAATTCCTTCATCTTTTAAAATAT TCCCATGATAGAGGACAATTACCTCTTTCCAAACGATATTTCAGCGAGTA TCACAGTTTGGgcttaaaaacaaattttataaaaattataagaaaacact TTGAAAGGATCTGAGATAGAGAGCTTGGATTTCTAGTTCAAATAGAGGGA ACCTCAAAGTTAGGTGCTGGGTATGCGCGATGACCTGGAAGGtcgacttt tttgactttttaaatcttGTTTTTCCGAGGGTTATATTATGACAATCAAG CGTCAAAAGATTTGTCAAAAGTCTTGGAATTTTCACTTCTTGTGTAAAAA GCCATGACaagtcaaaacatatttttgaaaatacttcTAGCCCTAATTTT CAAGTCTAGAGAAGAAATTCCTTGATTGTGTCTcacattttaatattttg atggATATGAACAATATTACACACTTTGTCTACTTCCTGAGCCGGTGGTT GGGGCTGTTGGGCCTGCTGAGCCGGAGGTTGGGGCTGTTGGGCCTGCTGA GCCGGAGGTTGGGGCTGTTGGGCCTGCTGGTTTTGCAGTCGTAGCTGTAT AGATAAGATGCTTTGATTGCTGGTCTTAACATCCCATAAAGATGACATTC ATAGTTTCATACATGAGGAAGACGGGAAAGCACCTCATTAAGTGTCGCGG gcttttcagtattttagttccgcgaGGCTCTGTGGGAGAAAAGGTAAATT CCCTTACCCTGATACAGGTACCAATGTGGTGCTCCCCCATTCCGGCAGGG TACTAGGAGGTGTGTGTAGAGATCCTAAAAAAACAATGAGAAATTTTTTG TTAGAATCAAAATCGTCAACCTTTCGATTCAATGTTATGTTATGTTCCAA AAATTCCTTCATCTTTTAAAATATTCCCATGATAGAGGACAATTACCTCT TTCCAAACGATATTTCAGCGAGTATCACAATTTGGGcttgaaaacaaatt ttataaaaattataagaaaacactTTGAAAGGATCTGAGATAGAGAGCTT GGATTTCTAGTTCAAATAGAGGGAACTTCAAAGTTAGGTGCTGGGTATGC GCGATGACCTGGAAGGtcgacttttttgactttttaaatcttGTTTTTCC GAGGGCTATATTATGACAATCAAGCGTCAAAAGATTTGTCAAAAGTCTTG GAATTTTCACTTCTTGTGTAAAAAGCCATGACAAGTCAAAACATATTTTT GAAAATACTTCTAGCCCTAATTTTCAAGTCTAGAGAAGAAATTCCTTGAT TGTGTCTCACATTTTAATATTTTGATGGATATGAACAATATTACACACTT TGTCTACTTCCTGAGCCGGTGGTTGGGGCTGTTGGGCCTGCTGAGCCGGA GGTTGGGGCTGTTGGGCCTGCTGAGCCGGAGGTTGGGGCTGTTGGGCCTG CTGGTTTTGCAGTCGTAGCTGTATAGATAAGATGCTTTGATTGCTGGTCT TAACATCCCATAAAGATGACATTCATAGTTTCATACATGAGGAAGACGGG AAAGCACCTCATTAAGTGTCGCGGGCTTTTCAGTATTTTAGTTCCGCGAG GCTCTGTGGGAGAAAAGGTAAATTCCCTTACCCTGATACAGGTACCAATG TGGTGCTCCCCCATTCCGGCAGGGTACTAGGAGGTGTGTGTAGAGATCCT AAAAAAACAATGAGAAATTTTTTGTTAGAATCAAAATCGTCAACCTTTCG ATTCAATGTTATGTTATGTTCCAAAAATTCCTTCATCTTTTAAAATATTC CCATGATAGAGGACAATTACCTCTTTCCAAACGATATTTCAGCGAGTATC ACAGTTTGGGCTTAAAAACAAATTTTATAAAAATTATAAGAAAACACTTT GAAAGGATCTGAGATAGAGAGCTTGGATTTCTAGTTCAAATAGAGGGAAC CTCAAAGTTAGGTGCTGGGTATGCGCGATGACCTGGAAGGtcgacttttt tgactttttaaatcttGTTTTTCCGAGGGTTATATTATGACAATCAAGCG TCAAAAGATTTGTCAAAAGTCTTGGAGTTTTCACTTCTTGTGTAAAAAGC CATGACaagtcaaaacatatttttgaaaatactgcTAGCCCTAATTTTCA AGTCTAGAGAAGAAATTTCTTGATTGTGTCTCACATGTTAATATTTTGAT GGATATGAACAATATTACTCACTTTGTCTACTTGCTGAGCCGGTGGTTGG GGCTGTTGGGCCTGCTGAGCCGGAGGTTGGGGCTTTTGGGGTTGCTGGTT TTGCAGTCGTTGCTGTATAGATAAGATGCTTTGGTTGCTGGTCTTAACAT CCCAtaaggatggcattcatagttTCATACATGATGAAGACGGGAAAGCA CCTCATTAAGTGTCGCGGGCTTTTCAGTATTATAGTTCCGCGAGGCTCTG TGGGAGAAAAGGTAAATTCCCTTACCCTGATACAGGTACCAATGTGGTGC TCCCCCATTCCGGCAGGGTACTAGGAGGTCTGTGTAGAGATCCTAAAAAA ACAATGAGAAATTTTTTGTTAGAATCACAATCGTCAACCTTTCGATTCAA TGTTATGTTATGTTCCAAAAATTCCTTTATCTTTTAAAATATTCCCATGA TAGAGGACAATTACCTCTTTCCAAACGATATTTCAGCGAGTATCACAGTT TGGgcttaaaaacaaattttataaaaattataagaaaacactTTGAAAGG ATCTGAGATAGAGAGCTTGGATTTCTAGTTCAAATAGAGGGAACCTCAAA GTTAGGTGCTGGGTATGCGCGATGACCTGGAAGGtcgacttttttgactt tttaaatcttGTTTTTCCGAGGGTTATATTATGACAATCAAGCGTCAAAA GATTTGTCAAAAGTCTTGGAATTTTCACTTCTTGTGTAAAAAGCCATGAC aagtcaaaacatatttttgaaaatacttcTAGCCCTAATTTTCAAGTCTA GAGAAGAAATTCCTTGATTGTGTCTcacattttaatattttgatggATAT GAACAATATTACACACTTTGTCTACTTCCTGAGCCGGTGGTTGGGGCTGT TGGGCCTGCTGAGCCGGAGGTTGGGGCTGTTGGGCCTGCTGAGCCGGAGG TTGGGGCTGTTGGGCCTGCTGGTTTTGCAGTCGTAGCTGTATAGATAAGA TGCTTTGATTGCTGGTCTTAACATCCCATAAAGATGACATTCATAGTTTC ATACATGAGGAAGACGGGAAAGCACCTCATTAAGTGTCGCGGgcttttca gtattttagttccgcgaGGCTCTGTGGGAGAAAAGGTAAATTCCCTTACC CTGATACAGGTACCAATGTGGTGCTCCCCCATTCCGGCAGGGTACTAGGA GGTGTGTGTAGAGATCCTAAAAAACAATGAGAAATTTTATGTTAGAATCA CAATCGTCAACCTTTCGATTCAATGTTATGTTATGTTCCAAAAATTCCTT TATCTTTTAAAATATTCCCATGATAGAGGACAATTACCTCTTTCCAAACG ATATTTCAGCGATTATCACAGTTTGGGcttgaaaacaaattttatagaaa ttataagaaaacactTTGAAAGGATCTGAGATAGAGAGCTTGGATTTCTA GTTCAAATAGAGGGAACCTCAAAGTTAGGTGCTGGGTATGCGCGATGACC TGGAAGGtcgacttttttgactttttaaatcttGTTTTTCCGAGGGGTAT ATCATGACAATCAAGCGTCAAAAGATTTGTCAAAAGTCTTGGAATTTTCA CTTCTTGTGTAAAAAGCCATGACaagtcaaaacatatttttgaaaatact gcTAGCCCTAATTTTCAAGTCTAGAGAAGAAATTCCTTGATTGTGTCTCA CATGTTAATATTTTGATGGATATGAACAATATTACTCACTTTGTCTACTT GCTGAGCCGGTGGTTGGGGCTGTTGGGCCTGCTGAGCCGGAGGTTGGGGC TTTTGGGGTTGCTGGTTTTGCAGTCGTTGCTGTATAGATAAGATGCTTTG GTTGCTGGTCTTAACATCCCAtaaggatggcattcatagttTCATACATG ATGAAGACGGGAAAGCACCTCATTAAGTGTCGCGGgcttttcagtatttt agttccgcgaGGCTCTGTGGGAGAAAAGGTAAATTCCCTTACCCTGATAC AGGTACCAATGTGGTGCTCCCCCATTCCGGCAGGGTACTAGGAGGTGTGT GTAGAGATCCTAAAAAAACAATGAGAAATTTTTTGTTAGAATCAAAATCG TCAACCTTTCGATTCAATGTTATGTTATGTTCCAAAAATTCCTTCATCTT TTAAAATATTCCCATGATAGAGGACAATTACCTCTTTCCAAACGATATTT CAGCGAGTATCACAGTTTGGgcttaaaaacaaattttataaaaattataa gaaaacactTTGAAAGGATCTGAGATAGAGAGCTTGGATTTCTAGTTCAA ATAGAGGGAACCTCAAAGTTAGGTGCTGGGTATGCGCGATGACCTGGAAG GtcgacttttttgactttttaaatcttGTTTTTCCGAGGGGTATATCATG ACAATCAAGCGTCAAAAGATTTGTCAAAAGTCTTGGAATTTTCACTTCTT GTGTAAAAAGCCATGACaagtcaaaacatatttttgaaaatactgcTAGC CCTAATTTTCAAGTCTAGAGAAGAAATTCCTTGATTGTGTCTCACATGTT AATATTTTGATGGATATGAACAATATTACTCACTTTGTCTACTTGCTGAG CCGGTGGTTGGGGCTGTTGGGCCTGCTGAGCCGGAGGTTGGGGCTTTTGG GGTTGCTGGTTTTGCAGTCGTAGCTGTATAGATAAGATGCTTTGGTTGCT GGTCTTAACATCCCAtaaggatggcattcatagttTCATACATGAGGAAG ACGGGAAAGCACCTCATTAAGTGTCGCGAgcttttcagtattttagttcc gcgaGGCTCTGTGGGAGAAAAGGTAAATTTCCTTACCCTGGTACAGGTAC CAATGTGGTGCTCCCCCATTCCGGCAAGGTACTAGGAGGTGTGTGTAGAG ATCCTCTAgaatatgataaaaattataATGTTAGAACACATTCATCAACT TTTCGATTAACGACGATTCAACGATAAATTTCTGtctgaaaaataatctt ttcgTGCTAGGGCTATTTTCCTTGTTCCAGTCCATTCCTGTAGAATATCC ATTATTTCGGACTTGCTCCAAAACTTGAATGTACCATAAAAAAGAGCACT CTATTCAGTTAATCTACAGTGTCATTTAACAGCTAATATCAATACATAAG AAAGTTGAggtgatacacgtttttttttttataagaacgtcaaaaatttt cg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019105TCONS_00019105Clytia hemisphaericatranscript
TCONS_00019106TCONS_00019106Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000319supercontigsc0000319:334007..341108 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24 0.32 0.12 0.09 0.03 0.02 0.03 0.05 0.03 0.01 0.11 0.02 0.04 0.01 0.08 0.03 0.08 0.12 0.02 0.06 0.11 0.07 0.23 0.32 0.13 0.16 0.05 0.04 0.52 0.74