XLOC_010543 (gene) - C. hemisphaerica

Overview
NameXLOC_010543
Unique NameXLOC_010543
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000309:204633..213430+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010543 ID=XLOC_010543|Name=XLOC_010543|organism=Clytia hemisphaerica|type=gene|length=8798bp|location=Sequence derived from alignment at sc0000309:204633..213430+ (Clytia hemisphaerica)
GTTTCTGTTGGGTGAAGTCTAGTTCCCATTCAGATAAACCAAGTATATGA CGATTTGAGATTGTGAACATCCAGCATTCTTCAGATTTCATCTCAATCAT GATCAAGAATCATTTCCCGAAGCGAAAGAACGGCTCATGTGATGGAGTGA CGTCTATTTTACCGACATATTTCCAGCAAGAGTTGGATTTCATCCATCAA CAACATGCTGATGAAttaagtcacgtgactaaacaACTGGCTGAGGCCGA AGATCGAGAGGCTGATCAGGTTTCTATTATTTCCTGACTTTGTAATTACG AACCTATACAGTTGAGGCTCTCTAATGCGATGCCCTTCTTTCTAATGGAT ATGCTCTAATTCTAATATTCAATAATACTGAAAGTCACCATCAACAAAAC TCTACCATTCGTTACGCTTCCTCGATCAATGGAAATCCAGTCCCCCCTTG AAAATCAAATAAGAGAGCACCGACTGTAATgctatttgaagaaaaaaaga atatatttgaTATGATTCATTAATTATTTCGTTTTAAATAAACGTCCGAC CCTAAAACCGAGGCATTTTCGGCATTATCTGGCAATATAATGTGTATCAA TGGTATTCGAATGCTAAATTTGAGGTATTTTGGACATAAAATTCGAtaaa aagccaaaatttcagttttgaaggcttttttgaCTCAAAATCCATAAGCa actttttggctgaaatctggaaaatattttgagccgAAAATCGGGgttgt ttataaaaaagaatGTGTATTAAATATGTATTATTCTAGTAAGCTCACCT GAAAAATTTGTAGTACCTAAAGAATTTCGTTGAATGTCATCTTAGGTTGA TCGGAATTGCACTTTGAAAGCAGAAATGGAGGAGTTGACCAAGAAGGCTT CAGGATTTGAAAAGGTTCTCCTTACTCAAgaagaaaacattcaaaatctc ACCAGACAGGTATCTTCAAATACTTGTAAAATACATTCTCTCTCGCGCTC GCTATAATAATGTTGTAAGGtaagttgtttttatttgcttattgattctt tttttgtctGACTATTTTCCAAAAGCAAGATATTCAGGttacaagttttt gacttttgagaAGAGTTAGACAAAAAGTCTTGGAGGGTTCGCTCAGGACC ATGGTAGGAGTGTACATGCTAAAGACCTCAAACCACCTAATTATCCCTTT AAACAAACACCATACCCGCTCATTTTGTTCAGGAAAGCATACTCTTACTT aggtttcaaataaacgcccctcccacccgcttgttaatttttcgaaaatt ttctaacccccggaccttattaggatcCCCCCcgttcattaatttttaag aatattttcagctgtcgaagagaaggccccttattttgcatTAGCCatat tttagcctatatttaccttatttttgggtttgcagaagtacaaccccccc cccccccgtttattacaattttgaaaattttccaacgccccccccccccc cccccgtttattacaattttgaaaattttccaacgccccccccccccccc cccgtttattacaattttgaaaattttccaacgccccccccccccccccc cgtttattacaattttgaaaattttccaacgccccccccccccccccccg tttattacaattttgaaaattttccaacgccccccccccccccccccgtt tattacaattttgaaaattttccaacgccccccccccccccccccgttta ttacaattttgaaaattttccaacgccccccccccccccccccgccgttt atttggaacctaagagtaagttttttttgcaaacaggTGCAGGAGCACGA GATGAAGAATATTACTTTGAACAAAACATTGACTGAATCTGAAGCACTCA ATAAAGGTGAGTTGCCCAGCCTTCTTTCACATCGCAAAGGTAAAGCCTCA GTATacgctttttttattagaatagtgaattttggatgagggtcaagcat tcttaagaaattgccaaaattgaggacGTGTAAACGTATTCTtgcttttt tagacttgacttttatACAAACAGGAGAAATTATTTGAGAGTTTAAAACA TTTGTGTACACCTTGGTTtgctaaaattatatttctgcctcaaagtttta aattaaGTCTAATAAAAGCccagtttttttttgttaaccaaatacaaaat gactgtgatttttatcaaaatcacaATAAATCATATCAAAAACCCATCCT ACAGgatattcttagggtattcttacgatttggccaattttcatctttta tttttacagaagatattcttataaaaaaagcgtgtatctgaATGCATCCA GGAGAGGTTAGCTATCCTCAAATCCAACGATAGTAAGGAAACTTTATTAT TAGAAAGTTTTAGGGAATTTTCAAAGCAATATTTGTGTAAAATATAATGC ACGAGTTTACTTCCAGAAATGACAAGAAAGCTGCAACAATATTCTGACGA AAAGAAGCGACTGactgaagaaaaagaagttttGAGAGCGGAGAAGAGCA ATTTGAACAATCGCTTTCTGATGGAAAAAGTATTCATATTCACTTTTGAG ATTTCTTACATCATTTTAATATTTGTTATTTCCACCCTGAATTCACTTTC CGTTTGAAAACTGTtggttgaaattgaaattgaaatttactatagtggga taaaatttcgcggggattaaatttcgctgaGTTCGCGGAGTTGGGtttca tccgcgaaattaagtcccaatagaaatttggaaaggccttgtccgcgaaa tatttttaaagaaaacgcaaatgtcaaataaactacttttagaatgttta ctggcatcaaagaagcccTAATAATGAGTGTTTCAACAAAAAACATTCAC ATTTGGCATTAAAAGGCACAAagtcgtgaaaatattgtctttcAATAGTG CCgtccgcgaaatcttaaaatctcGTGGATGAGCTCaatgaaatttaatc cccacaaaagtttattccattaaaataatttataaccTCTTGTTTTTTCC GTTTCAATACAGAGTAAATATGAGTTGTTGAAGGAGAAGCAACAAAAAGA CGAAGATGAATTGCAACAGAAAAATAATTCATCAATTAAAGATTTGGCaa aattgaaaagagaaatGGGTTCTGATACATCCACAATGGTTTGTTCCCTT TTTCAAAATAGTGCAAAAAGAGACCCTATGACTACAGTTCTGGACATAAC TATTTGTCACTCCCCCCATCTTCAGTGTTGATTTGGAGTAAGTGGAAGTT GCAAATTTCCTCCctcaaatattgaaaatggGGGAAGGGGGGACTCAGCA TGGGGAAATGAGTAGTCAGACAGTAGTTCTGTCCACGATTGTAGCACAGC TTTAATTCCCACTTTTATGAAGGTAACACTGTATTACATAAATAGGCATC GTGACTTGAAAGTTAAGAAGGAGGAAGTACAAAATACTCCATAGCTCATT TAAAGAAAATCTCATAAGAGAAATGAGAGAATGCTATAATTCATTTACAG GTCACGAGTACACATCCCAAGACAGGAGCCAATCATTCGCTAGTACCATT CTTCTTAAACAAAGAAGAGGACTTGCTACGACAACAACTGAAGGAGGAGA AAGAGAAGGGAAGACGTTTAGAAGATGAACTGAATCTCATGAGAATATCA CAGCATCATTCTGGAAAGGTATTCATCCAACTTTTTGACAAATTacaaat tctttcatttttttctcaaatcttaAACTGATTTAATTTAAATGGATGCT TATCATTGGAAATGCTGTCGAATCCTTTTAGCATTGAGTTTGAAGTCCCG AAGGGActagagatgaatcttcaacctttctcaaacaagaaaaagtgaag ccttaagtttgCCCCGCATTTAGAAATTATGTTTGAAGAACACCCGGGTC ACTTATTCTGGATGGAAAATAATTGGCTTCATTTCCTATCCTGGAGTTTC GGATCTAGTCCCTTCGGGACCTTGAATCAATGCATTTTAGAATTCTAGCC TGCAAGCACTTATGTCTTTGATTCACGACAGTGAAATGaaactttgaatg aaaatttgtatatattatatttttccaTAGAAATTATTGTCCAGTGGACA ATCATTGGAGCAGTTGGAGACGATTCTCCACAAAAAGTCGGCAGAATGCA GCGCCTTatccatcaaaataaacacgatGCAACACAAAGTGACGTCACTT CAAGAAGAGGTTATTTCTatttctctttcattttcttcgAGGTTCTAAGC TACAAAGGCCATAAATGGTTTTCTTATAACTCTTATTGGTATAGGGCGTC TACTAAACTTAGGCGATCCACCTCCGCCCTTCTTCTGAATTCTCATCTAC TCTTACTCTAATCCTTCGATGCTAAATGCTAAGAAGACTCCAGAGTTTTT AACGTAAACAACATGTCAAGTAAATCTGACCAGGTCTTTCGCAGGTGTTT TCATAGTTCATAAATTTATTGAGTGATAGAAATCTtcctttttattataa tttgaGCCTCTCTTGAGTTGGGCTTGTTTTCGCatatatcaatattttct tGTTATGTTTAGAACACAGCACTTCAGGAGAGAATTTCGACCTATGAACG AGAAACACGAAATATAACGGATGAAATCGAAGCGCGGAAGAGATTGGAAA AAAACAACAGACGTTTAACTGAAGACATCATGACATCAAAAAACGAAGCC AATAGGATGTCGAAAATAAATGATGACAAGTAAGCCTTTCCTTTGAtcga atttaatttcgcgagtcgtTATCTTTTAGATTTGCTTTTCGCAAATCAGA AGTTCGAAAAATTACGCATAGGtttaatttcgcaaatcagCCAAAAATCA GTTGAAAGTGGTCTTTAAGAACCAAAATTACGGTATTTTAcgtgtatttt gatttttgaagatttcgcgtggatttaatgtTACGGAAATGACAATATTT GGGAGAACGCAacattaatccgattaaagtgttttcattttcattcaaac CATCTTTTGAACCAATTTAGTCCCCCGGGGCgtacttgatttaaaatttg tgAACATAAAATCAGGTTCTCTAAAATTTGGACCATTACCCTTATAAATA TGTTTCTATTATATGACAAAATAATATTGGGCTTTCAAGTATTATGCCCG GAAAACCTCGTTTTTCTCACTTCTCATACTCTAGGTACTCTAACATtcga aaattgatgaaaaacattGGGAGACGTTTATTCGGGACCTTTTAGAGTAC CCTTTGAGTGCACCGTTTCTCCAAACCCTTGGGAAGCCTACAAACCATAA TGACATTCTTTTTGTTATTTCAGTGAAAGATTAATTTCCAAACTAAAAGA AGAGATCCAAAAGCTGAAGCAAATCGTCTCTGTGAACAATTCGACTTCGC GCCAACAAGAAAAGCAAATTGACGAGCTGACgaaagaaaatgcaaaattg aGGGAAGATTATTCCGATATACACCGCAAGTTAATGAGTTTCGAATACGA GAAATCTGATGCAGCCAAAGTGGACCTTCAAAGAGCAAACACCAATTTGA AATTAGACATCACAAAGATGAAGCGTTATCTCTCTAATACTTTGGATCAC GTTTATGAAGATCAGTTGGCGTGCAAACAAAAATACGACCAAATtatgta agaatattttcacaTAGCCACCCAAGTCCGCAATGGACAATCAAATAAGC AGATCTTTTAACCTACACCaataatgtttatgtttatgtttcttttcatt TAAGTTGATGTATAATAGGTAGTACAATGTGTAATTAGTTCggctaatca atatcaaaaGTTGCACCCGAAGCTTTCAATTCTGTCTCCATCCTCAAAAT TTTCCTGGTCTCCTGTCGATTAAGCACTTGAAATTAGCAACTGTCAAACG TTCATATTTCAGAGGTGACATGCGATATGAGAAGAAAGATGTAGAAAACA CAGCACAAAATCTTCGATCCACTTTAAAAATGATTCGTTTGAAGAACCAA CACAATGAACAACTGACTGCAGCAAAACAAAACACGTGCAAGGGTCTACT GCGTCAGATAAGCGACTTAAAATCAAGGTAAAAGTTGTCGGATATTATCA GTTCTTCTAAACACCCCTAGTCTGAACACAGACTAAGGGACAAAATCAGc ctaatacacccccttctcacagacccagtgggatttttcagccatttggg ggtaaaaataacagaccaaaactcgatggggattgatgttCCTATGTTTT TTAATGACTGGAGATTTGAATTCaattgttttcgagccagaaaattctgt gggggtggaaaaaatagcacaatattttgcagtgaggattttctttctga ttattttcattggggacaaaaattggagtataatttttcgctgggaacga tattttggccagttTCTTTAGTAGGAAGAGGTCCCagttggtctgtgaga agggggtgttccaaTGAACGCTTACTGCTTTCACTCTTGAAACTCCCTCT ATCAATGACTTGATCTTGATTTCGCTGAACGGAGAGGGCAGTCAATTGAT TTTTACGTTATAAAAATGACATGTCAAGTACAGCAATAAataacaacttt tttttcacagaattttgtGTTTGGAAGAAGAGATGATAGAAATGAAGCAA GAACTTCGCCAAAAAGATGATAGAATATTCTTCATGGAAAACGAAACGAA AGAATTGCACTCGAATATCGATCGATTAAACTCCAATTTCACGTTCTCTA CGCACCGATCAAATGAGGTGATTACCAACTTCCCCTTCCCGGAAGGATTC ATTTCCGTTCGGTCTGTGATGGTCTGCAAGTACCACTTACCTATAACAAT CGGATATTGCTGCGGTAAAGCCAATTTTTTGCGATTGCGTAATTGTTAAG GGAGCGGTTTGATTGTTATGGGTTAGTACGgtcatggaattattatagac actgaaAAACAACGAGCtgaattttgccaatttctcatgtacaagccttg tccgcagtaatgacatgaTTGTTCACCCTCATTCcgccattaaatgattt ttcgtagcATTTTAATCGCacttctcatcaaaatacacttatccaattcc caaatgagactttaagttctcctccgagattcaaactcatctagttaaTT ACCAATTAtgcgtcgttatgacgttttaaatttcgagaAGAGATGTATAA GGAATTGAAttttgacaccagaaatttttaaatttcaacctcaaaaaagc caccgtgccaccacgtgccacaaaaagattttcataccacagtgtagcta tgagactcacgtctaatatatatcaatctcagctcttctcggagaaattt tggaaagatattcccgcaattcaaaatttcgtgttattataagcattttg tttggttttactcgtctgatgatgtttttctcacatcagatttcataaat gtattctcttggtattctagcatttactttcaaacttttaaccagcaaaa gtacgatcagaaaaagttagagaactttttagaattaagagtattaatca tttttcaaaatcagagtccttcgagccgccatgacagttgtcctttgcgg acaaagcctgtacatcgattgttttctgaaacaatggaaatacaattaca atacttcgctctcaaccgtttcattcgatgtttatccaaagtctctataa taaatccatggtaCGGTAAGACGGAGAAAATTCCCCGCGGCCGTCTTCTT GTTATATCCTTaatgaaattctcaaaaacGCGGTttctctaattagcgga cagtTTTTATTGCACGGAATGCTCAAAAACCTGATGTATCGTGCTCGTGG GTCAAATAACTAGAAAGTCATTAAAATAGTCATTAAAATACATAAAAGGA GTTTCATTCAACAAATAAATGCAACAACCATAAGTATTCCATTAATTTGT AAATTGCATAATTACTTTGTTTGATCATTTTTTCTGAAATGTTTGCCGAT GAGTCAAAAGTCTCTAACAGGCGGACACTGGGCGCTAATAAGAGGGTTAA ATGTATATCTTaatgattttgaaatcaaaaggtattacaaaacattatca aaaaatatttatttaaactttataaattttgaattttaatgtcCATCGAA TTTGGTTTATTTACATTTTAGATTTCAACGACATGGAAGCTAAACACGTA CGAAGAATCATTTTACGACCCTAACAAGTTTTTCTCCATCAACCCGAAAA GTTTTCGGTTTCTTGGAAAGGCTGATAATTCAgatgaaataaattttaca atttgattttattcgttaaattttgtatatattgacaatttaaaaaatat tatactacaataaaaatgaaaaagctaTTTTACATTAAAATTCTAATGGT GGTGCGAACTGCTTCGCTGTTGCGATGAACTTCGCTGTGAGGAACTTCGT GAACCTGGAAATAACCGacccaaaaaatatttcataagaTACtataatcg tagaaattttagcgagactaattttagcgtatattagcgagtcaggaaaa tcttgatttttttggatttatttattaattttagCGAACACTCGTATCAC ATTATTgattgaattcgttttctagcatttctttgcactgaaaccctttc tattgataaaaatgtatcaaggcaatacaaccagaaatttcgcgcggata aattttagcgatctggcgattcggcgtgttttagcgagatttatttta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018821TCONS_00018821Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018821-proteinTCONS_00018821-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:204633..213430 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.15 0.16 0.12 11.74 9.89 16.54 15.61 11.83 10.69 8.09 7.93 0.8 0.71 0.08 0.07 0.32 0.36 0.99 1.12 0.8 0.94 0.35 0.64 0.96 1.11 0.47 0.34 0.48 0.15