XLOC_010484 (gene) - C. hemisphaerica

Overview
NameXLOC_010484
Unique NameXLOC_010484
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000305:31534..38505-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010484 ID=XLOC_010484|Name=XLOC_010484|organism=Clytia hemisphaerica|type=gene|length=6972bp|location=Sequence derived from alignment at sc0000305:31534..38505- (Clytia hemisphaerica)
GCGAATATTATGAAATTTTTGCTTTTGCTTAACATATTCCCAGCAACTAT GGCAAAGGAACCTATCGTTTGGGACATTCTTGGATTGTTTACAATGACCA ATTGTCAACCAGGATTCGAACATCATTGTTTAGATGCTCAATGGACTGCA GATATCTTATCACATCTTGTCCCTGATGAGAACCCTCTAAAATTGGATTA TCACGAGAATAAAAGAAACAGGTAAATACACGTATTTCCTATTAGCAGAT TCATGTAAAAAAGTCACGAAAAAACGTCGAGTAAAGCTCTGATTGGCTGA ACATTGCACATATAAGCATATTTTTTCAAAATGTCTTTGCATGTCTCAGC CAATAGGAGCTTTACTCGTGACGTTTTATATGAATCTGCTAATATTAAAT TTTTTATTCAGCTCGAAATATTTGATAAACACCTCCTTTTCACAAAACTG TTTCACAGACCCGGTGGGACGACCGCTCCACTCGAAAATTAAGCCAAAAA ACTTTTCCCCGCTGTTCCATTTTTTTTGTCAAGAAAGCTCACAAAAATAC TCATTAAATAGTTAAATAAGAATATTTTAAGAACATTCTTTAGGGTTAAA AACTTTTCATCATTTGATCTAAAAACTTCGTTTATGCAGTGTTTGTTTCT CTCTCGTGATGTAAATAGAAAACTGGATTATAAAGAGACACAATGTAACT TCCGATCAATACACGATACAATTTTTTATAAGAACATCTAAAATCTTTGA AGTCTTCGGATGTTCTTAGCTTTTTTAGTTTTGAGCCTTAAAAGAGGTTC TTAACATGTTCTTATTTTAACATTTTTGTGAGTATTTCTGTCCATTTTCC TAAGAAATTGGGCGTTTTAGAGTGCGTGAAGTCTTAAGATGTTCTTAACT TATTTTTGATATTCTTGTACTTGAAGCCATGTGTTCTTACATAATTTGTT CTTATAAAAAACGTGTGTGCTACTTTCTGCAACAACTTTTGTAAGAAAAA GTTGTAGGGGTTTCACTTTATAGGAGGTGACGAAATTGGAAAAAAACTTT TCGTCATCACTTCTTTTAGCTCCCAATCAAAAACCCTTCCTTTTTGTAGG TATAACAAAGAAAAAAAAAGAACTAAAATGATTTCTATGTTTCTTTTTGT CAAAAAGTGGGTTTATTTTCATATTTACATGTACAGGTACAAGTACTATT GTATCATTGATATAAAGAACTCAATCAAAGCTGTCAACGATTTCGCTCTA CCTTTCATCGAACACCCTGTCACAAACACGAGCGGGATGTGTTCCCATGG GAATGCCACAACAACGCACAATCGAGAAACAACTATCATCCTAACCTATA TGTCTCATGAATTAACGCGATTCTTGAGTTATCTTCTCCTCAATGAAGAT ATACCTTTACTGTCTGTCACATGGCAGGAAATGTACCCTAGCATTTTAGT AGAGAAACCAACAAACATTTTCAGTTTTGAATGTAGTTATTCAAAAGGAA AATCAACAGAGACATTTCTGTCATCTCTTGGTGTTACTTACAGTGCAGTG TTCTACATAAAAGAATTTAAGGAAGACGATTCAGTGATCAGAAAGAATTG CACCGAAAGAAAAGATTCAGCATTCTGTCATCTCTCACACATGGAATATG CAGATAAATATCAATGTATCTTTAAAGGAAGAAATTTTGGCGGAAAGAAA ATTTGGCGGATTTGGCGGATTTGGCCAGAATCCGCCAAATTAAGTTTCCA CCAAAATTTATTTTTTCCTCCATCCGCCAAATTAAACTCCCGCCAAATTA ATTGTATATAACGCATTCCCCAAATTGCTGCTTTTTCAGGCCTTTAAACA GGTTGTTTTACTTATTTGATAACGATTTTGGCCAAAAATATCCTGCAACC ACCAAATTAAAATCCCTTCAAATTTATTTTTTCCAGCCATCCGCCAAATT AAATCCCCTCTGAACAAACTTATTCGACCATCCGCTAAATTAAATTTCCA CCAAAATTTCTTCCTTTAAGGTATTAAGGAAATTTACATCGACCGCAATA ATGAGACACAAGTGAACAACTCCATTGCTTTTGTCAAAGCGCACGAGAAC CTGAGAGCGATTTATATTTATGGTTTATACACTACTTACAAGTCCTTCGG GTATCAAGACGCGTTTCACTATTTCTGGCACCCAGGTAAAACTTTTGTTT TGATTATTCGTTTTAACAATCGAAAATAGCAACCTGATTGGTACAGGGTT TGCGCCATTTCGTATTTTGATTGATTGCTTAACGGGGAAGCAATTTTTTT AAACAATTTTCATTTCAGACGCAAAAAACGATTTCTTTTTGGCTCCATAC GTGAGACCTTACAATAACGAAACAGCGACCTATCAATCTCAAGAAAGCGA CTTAAAACGAAGAAAACATTATAGACAGTTTCAAAATGTACCAGGTGAGG TTTCCATTCTTATAAAATATTTTACAATCACTAGGATTTCTTCATTAGGG AAATAATACTAGGGCGTGTCTCATGGTTTCTTTTTTTGTTTTATGGGATA AAAAGTGAGGAAAATACCCAAAAGACACGCTGACTTTGTCCCAGGGATGA AAGTAAGAGAAGCACAAATGGTATTAAAAGAAAAATGAGACACGAGAAAG CGTTTCAGGTTGGTGGGATGGAGCATGTTGCATTGCACCAACGCGGAAAA AATTTCTCGTGTCCCCAAGCCTTTAGTTGTTTAAATTCTTAACGTCAACC TGTACTAACAAAAACTTTTGGGACATGAGAAGTTTTTTTCGCGTTGGTGC AATGCAACATGCTCCATCCCACCAAATTGAAACGCTTTCTCGTATCTCCA CCCCATTCTTCTTTCTACCAAAAAAAGTGAAATCGACAACACTTTTGATA ACATTTGCGTGTCTCTCACTTTTGTCCTTGGGACAAAATCAGCGTGTCTT ATTTTTTTCTCTTGTCCCCAAGCCTTAAATTCCGAATCGATCCCAAGAGG AGTCTTAAGTATTTTGATCAAAATCTGAGCAAATCTGTTTTTATCTTTTG TTATCAAAAAAGGACAAAATCTAACAAAAAGTTAAAACAATAGGCTTCCA GACTGGGGTTTTTGATACAGCCTATGCTTTGAAGCCATCGGAAAACTACC GTACTTACCTATAACAATCCAAAAGTTCCTTTAACAATCAAATGCGCCAA GATGATAAAACACAGCTGCACTGCAGCACTTATTCCAATATTTGCGATTT TACCGCTTTTGATTGTTAAGGGAGCTTTTGGATTTCAATAGGTAATACTA TACCCTGCATTTCAAGAGGAATATTCTGTTTGTTTTAGGAGGAACACAGT TAGAAGAAATTATGTGGTTAATCACTGAATTCAAATATCTATTAGTCGAA GGTTATCCACAAATTTTGGATGGATTGAAATACGCATATCCTCAATTCTC TGGAATGACTACTGAGCAATGGCTTAGTATTGATGTAAGAGAATGCAACG GAGTCTTTTTAACTCGAATGTCTCCTTAACTCGAACAAGTTTTCTCGTCC CTTCAGTTAACAATGCCTTATGAACCTTACTCCATAACTTGGACAAGTTT GTTTTCCCGTGCGTGTTCGAGCTATACATCCCCTTCTCACTAACTTGGTG GAATTTTGCCTGCTAGTGGGGATAGACATAACGAACTGAAAATCGACGAG GATTGATATTCCCATATTCTTTTTAGCAGAGGATTTGAATTCTTTTGTGT TCAAGTCAGAAAATTCAGTAGGGATGGAAGAAATTACACAATATCTTTCA GTGAGGATCGTTCTATTTGATTAAGTCTTTAAAAAATTAAATTTTCAAGC TTAAATGAATGTTTTAATGATTTTCGTAATATGCTTAGTTTATGTAGTTA AAAATTGAAAATTGGTTTAAAATCCGTTGAAATTAGTGCTTTTTTGATAA TTTCTTAAATCTGAGGCTCAGATTGTTCTTAGTTTGTTGCTAGGCCGATT CCCAGCCTGTTAAGATTCTTATAAAAAAGGCGTGTAGCAGCGAATCTTGA AAAAAATCTAGGACTACAATAACTAATATTCTCAACCATATTGTGTTACC TTAAAATGAAGAAATTTTGGCGGAAAGAAAATTTGGCGGATTTGACGGAT TTCGCCAAAATCCGCCAAATTAAGTTCCCGCCAAAATTAAATTTTTCCTC CATCCACCAAAATAAATTCCCGCCAAATTTACTTTATCCAGCTATCAGCC AAATTAAATTCCCTTTAATTTAACCATAGGTAAACATAAGACAACATTTT GCCAATCAGATTGCTAGCAATAGCGAAGAGCTAAAAAAATTGCTTTACAT GTGGAGAGGTATCACTTATCAAAAGGTTAGTATAGAAGTTATTATATCTA TTTTTCAAGGTTTTCTACGGGAATAAAAGGAGCTTATTTTAGGCAGTGNT ATTATATCTATTTTTAAAGGTTTTCTACGGGAATAAAAGGAGCTTATTTT AGGCAGTGTCTTTACGCTGAGTCAGATGAAATTAAATGAATTAAAGCTAC TTTTTTTACGCAACGATATCCTGCAAACAAGTGAAAGATCGAAAGTTGTT TCGAGATGTCACCTCACATTCTATTGCTTTTGCAAAACAAAAGAAATAGC AAAATTGATTTCGAGCAAATTTACAATCGAATGTTTTGATTATAAAGAAA ACGTTCTATAGTAATATGCCTTATGAACTAAATCATTTAATCTCTCAAGG GACATAATCACCATGGGAATTGTTTGAATACGAGGACAGCGATGTCCGTG AAGTAATTTATGAAAAGGTAATTATCCCGATGAAGGGAGGGGTATGAGGC TTGAAAGTGACTTTGAAATTTGGCTGAATTTTTAGGCGTTTTCAGTTGAT GACGTCATCAAAATAGGTAAAATGCTACGTCTCGAGATTGGATAGGCGTT GGGAGGTCGTTGACTCCTCACACTGGTGAAAATACTTTTCTTAGTACTTT TCTTTTCTTAAGTTTTCATTTAGGTTACAAACATATAGCTCTGGTTTCAT TGAGCACTATGCAACATCAATCACAAACAATACTTTACTTTCAATTCATA AAAAAATGGGACGTTTTCTATCTTATAATTAACTTTGCTATTTTTTGGCC CAGCCGCGCAGCGCAAGTGGGCCTTTAAAAAGCAACTGGTCGAAAACTGG TTTTTGGCTTTGTCGGGGCCTGTGAGCGCAATAAGTTAACGAATCCAGGC TAAACAACGCCCAACCACCCGACCGCCTGTTTTTTGTCTCGTCTACCCGC GTGATATTTAGGCTGTCTCATATGGGATGGAGTTTAGTAACAGAGTCAAA TTTATTTTATTTTTGGTTGCGAAATGAAGTGAAAACATGGTTATTTTCAA GATGGATTGAAATTTATATTACAGACTTGACACGGAATTTTTCCATGTAA ACTGATTCAGGAATTTGTTAATGGATACTACAATGCAGCTCATGTGTAAA TTTGAAAAAGATCGGAATATTTTTCATGGTGCTATGCATGAAAATGGTCC TTTCTGCGTTTCTGGATCTGTCGCATTTAATGGCCGGTTGCTGGATTTTT CAAACTTGACACGTAATTTTTCCATGTAAACTGATTCTGGAATTTGTTAA CGGATACTAAAATGCAGCATATATGTAAATTTGACTAAGATTGAAATATT TCAAATAATGCTAAGCATGAAAATGGTCATTTCTAGATCTGTTACATTTA ACGTTGGGTGACTGGATTTTTCAAGCTCGACACAGAATTTTTCTAAGTAA ACTGATTCAGGAATTTATTAATGGATACTTAAATGCAGCTTATGTGTTAA ATTGAATAAGATTGAAACATTTTTCATGATTCTAGCGTGTGAAAATGATG ATCCTTTCTTGATCATTTTTAAGGTCAGTGACATGGGAAGTTTGAATTTA TTAACCAATGTTTTCTTTCATATTACCGTGTCAAAGTGCATAAGATTCCG GTTCCTGGTCTATAGTTCCACTTTCCACTTGAAAACGGAAAAAGATAAAA ACGTTTTGGATAGCCAAAGAAGGAAATTTAGAAAGTTGGATGGTCATACA GAAGCGTCTCGCTTTTTTCGGGGCGATTTCTAGCAATATGACTGCCGGTA TACCCGGGGAAAATAGCAGAATGATTACGGAAAATCGCCAGTAATTTTTA CACTCTTTTTTTTCTTTGCAAAATTTTTGCACTTTGACGGTAGTATCAAA AATATAAAATGAATTTATTTTGTACATAATGTAGGCATGCAATAGCATAG CTTTTTTTGTTTTATTAAAATACTCTTCTGGTCACATTCATCACTAACTC GCTTTCATTTACCATTGCGGACTTTTTAGCGCATCTGCTTTCTTTTGTTT TGATATTTTGTTGGGCAAAGTTTGGAACATTTTTGGCTTTTCATTTTTGC ACTTCGAGAGTATAAATCTGGTACTTTTCGCAAAACCCAAAACGCAGAAA TTAGTCCCGCCAACATTACCGGTACTCGGTACGAATGAACATTCAGTTAT TGCCACGTCAGCTTGGCCTTCACGCCGATACGGCTTCTTGTTTGTTTTAC AAAAGCAATACAATGTGAGGTCACATCTCAAAACAACTTTCGATCTTTCA CTTGTTGGCAGGACATCGTTGCGTAAAAAGAGTAGCTATAATTTATACTA TCCCGTGTATAAGGTCAAGTGTGTTATAAGAAAATGGAACACATTCTTAA GAAAGCTTAGATTTTTGCATTGTTGTTTTTCATTTACAGGAAAGGGAAGA GAATCGCCGCGATCCTTACCTCTACAACGCGCAAAGACAATTAAATAAAT CAGAACCGTTCTGCAATTTAACCAAACCACAATGTGGAAAAGGCGAAGAA TTGATTCATGGATTTTACAAAGAACCAAAATGGGTGAACAGTTTTGGATG GTTTTGTCAAAAGTGTCAGCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018733TCONS_00018733Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018733-proteinTCONS_00018733-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000305supercontigsc0000305:31534..38505 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0 0.07 0 0 0 0.04 0.04 0.02 0 0.09 0 0.22 0.22 0 0 0 0.07 2.03 2.09 0.09 0.12 0 0 0.16 0.09 0.04 0 0.07 0