XLOC_010334 (gene) - C. hemisphaerica

Overview
NameXLOC_010334
Unique NameXLOC_010334
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000300:177015..181214+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010334 ID=XLOC_010334|Name=XLOC_010334|organism=Clytia hemisphaerica|type=gene|length=4200bp|location=Sequence derived from alignment at sc0000300:177015..181214+ (Clytia hemisphaerica)
CagtaaataacaaaaaatcaaaatcatcagtATGGTTGACATCAATAGTA
AAATCAATTCGTATTATAAACACATGCAAAGACATTTCCAATCACACGGC
CGTACTAAAGATTTTGTTGGACATTCTTCAAAGGTAATGGTTGTTTCAGT
TCTtattttcgttcgttcgttcgtttgtccgttcgtccgttcgtccgttc
gtccgtccgtccgtccgtccgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttgcTTCTCTCTTTTacga
aaaattacttttttttccAGGTGCATTCTGTGGGTTGGAGTTGTGGTGGA
CGCCATCTTGCTTCTTGTTCGTTCGATAAAACTGTCAGTGTCTACACATT
GGAAAAAGAACGTCTAGTAAGTACATCAATAATACAATGTAGGTAAGTAT
TTCAGGGTTAATTAAATTcgtgaaaatcattttttggcACAAAATGTATT
TCTATATGGATATCAGTTACAGCTTTGCGCTTTCAATTCTTTCTATCCTT
CTATTACAATGGCGAGGAATTTATGAAGAAGACTTTTTTTGGCAAGGTTC
CATTTTGAAGTTGTTGAAGTTAAATGTATTATTTTTGGATAGTGTTTACG
CGTAAGTAAAATAGATAGTGTCGACATTTTACACCGGTATTCCTGTAATC
TAGGACTTTAAGACagtttttcgattgttttcataGGGTCTACGGCCAGC
CAGCTCGACTATCTAAAAACTGAACGGAGCAtaggaaggagcggggattc
gaatcGCGATACCCTGGTTTGTATGATTTTAACTACTTTGCCATCGCTCC
AATCTTTCTTTTATTAACAGGTGAAAGAATGTACAATGAAAGGTCACAGT
GACAGTGTCGATCAATTATGTTGGCATCCGACCAATCCAAATCTGCTGGT
GTCTGCTTCAGGCGATAAAACCATAAGAGTGTGGGACGCAAGGAGTGAGT
CTTCAAATACACCCTTTATATAAAAACATGACGCTCGAATTTTGGTCAAA
ACCTAGGAACAAATTAAGATGATGCTAGCCTCAGACTtatgaaaaataat
gatttgAATCCCGTTCTAGCCAATAAGTGGATAAGGtactttaggtgtac
aaactttcgcgattttcgcgaattttggcccttttcgcggaagtaaatgt
ctttaaaaattctaggaagggccattcgcgaaagtttatgctcgtgaaaa
atgattgacaaaatctgtaaaacttcaaactttgaataaaatgtaacttt
tatggcactttttagcctgctaaaagactaattagtcaaaggacaaatgt
ttccagccaatccaagaagtatttgtccctctaagccattttttcatgtg
aaaattctcaattttacggcTTGATTCGCGAaggtttatgctcgcgaaaa
atattttccgttaaattcgcgaaagtaaatgccgtaaatttcgcgatttt
tcgtcctcgcgaaaatttctgctggcgaaagtttgtacacctaaagtaAA
CTATAAACATAACATACATAAACAACTTGTTTTTAGATAGTAGCAACAGC
AAATGTACAGATGTGGTCAGTACCAAGGGTGAAAATATCAATATATGTTG
GAGTCCCAATGGAAATACTATAGCTGTCGGGAATAAGGTATCCTCATTTT
TATCAGCTAAATTCTTTCAGGCTGAATTCTTTTAGAACTCCGACTACCAT
TTTTGGAGAACGTTTATCTTCTATTAAGCTGTGCTAAACAATGCTACATT
CAAGATTGAACCAAAAGCAATCGTTTCTTTTTTCATAGGAAGATTTAATA
ACTTTCATCGACAcaagaacattcaaaataatGAGAGAAGAACAATTCAA
ATTTGAAGTAAGTTTTTGCTAATTATCGAATGGTATTATTTGTTATTGGG
GTACACTTGGCGTAATTTCGAACGAAGGGTGGATTTCTTTGAATATCGGC
GTTCGGAAGCTGCTTATGATTCAAAAGAAGAACGCTGATTTCAATGTTGT
TTTTCTCTAAGTATTCATCGCATGTCACTGTAATTCTTTCACGTTTAGGT
GAACGAAATATCTTGGAATAACACCAACGATCTTTTCTTTCTAACCAACG
GTCATGGATGTGTTATTATATTAAAGTAAGACCTTTTCCTGAGTGTTTTC
TTAGAAACGAATGACATAGAAAGGACATGTGTTGAAAAAACTCGATGATA
ATATCTACAAATTGATTCTATATGGTAAACGATTTCGGAAATATTTCTTA
CATCAATTCTACCGTGTGAGCCGAAAAAACAATTGGCCTAACAAATTGTC
CTATAAAATCCTTGGGCTTCTATTATTTAATAAGTAGATCCATCGTTCCT
TCTCTCTCTCATTTCAGTTATCCAAATTTGAAGCAAATTCAAACATTGAA
TGCACACCCTGCAAATTGTATTTGTATCAAGTTCGATCCAAAGGGAAAGT
AAGTACTCCTAGATTTAAATTTCCCATAAAGAATTACTTGACACATGCTT
ATAATGCAcatgttttaatgtttttggtttCTCATAACAAGTGTCTGGTG
CGTGTACTTATATTTTCAAACCGACTTATTAGCATTTATTTAAACCCTAA
CACTGCCTTGgttcctttttcttttctattcagATATTTTGCAACTGGAA
GTGCTGACGCTTTGGTTAGCCTGTGGGATTTAGACGAATTATGTTGTGTT
CGCTGTTTTTCAAGGCTAGAGTAAGtgatttttttgctttattttctgGA
ATGATGATAGCAAATTcatctttttaagaaaattaaaagacattttttat
tattttgagaaTTTCGTGGTTCGACCTGTATTCTGTGTTCAAGGAAAATA
CCACTTGCGGGATTTAAGGGGGTTCTCCCTTTGGTGTTAACTTTGCTGTA
TATCTAGCTGCATTTATTTACCATGACaattcaatttcttcttttcagTT
GGCCAGTGCGAACGATCAGTTTCAGCCACGACGGACAAATGCTTGCGTCA
GCATCCGAAGACCTCCTTATCGACATCGTACGTCtttcttgttttgaatt
tttcgtgCACTTTTAGTTGAATTATCCTCCATACGTGTCACTGTAATTCT
TCTAAATTCATGTCACCAAATCTCCATTTTGAGCTGCTTTGAGATGTAAC
TGAAAATTCTCTATTGATATTTCGTATATTGACGGATAGAAAACTTAAAA
CGTAAAAACAGCAAATTGATCagaaaaatgaagcgactgTTTATGTAGAA
ATTTTCCTCGTCCTCAACATTGACGGGTAAAAAGGCACATCAGCATAGCA
AGTCGCGTGCTACTTCCCGACAATCATCAAACAACAGTTTTGTGAATTCA
CAATTGTGAATAACCAAAAGAATATGCTTAACCCAGTGGCACTTTTCTTT
TTAGGCCATGGTTGAAACTGGTGAGAAGATAGCTGAGGTACCATGCTCAA
CTCCTACATTCACTGTAGCGTGGCATCCGAAAGAACCAATACTCGCTTTT
GCCTGTGATGACAAGGTAAAATAAACTTTAATCAAACTTACATATCGCTT
CCCCTCCCTTCGTGCCTACAAATTAGGTACACTTCAAATTAGCGGACGTT
TTTCTTATTTACAAAGGATATCTACTTCTAATTGGAGTCGGGCTTGTATT
GCGTTTGGTTCTAACATATATAGTCTAGcaagacgactaattcagacaaa
gtagaaataaaacaaaGAGTAATgaagggaacaaattttagttagtttat
acaaactgaatcccgtaacaataatcgtattatcatataacgcctatact
actgtattacacgcattataaacaaCTCCAGTCTAATCTAACATGTTTCT
GACTCTTTTCTCACAGGACAAGCATGATCGAGATGCTGGTACTATCAAAC
TGTTTGGTCTTCAAAGCTCATCTTGATGAAATATCAACGTATAGAATGGA
ATTGATCGAGACAAGAGGCCAGTTTGCACTGGAAATCTTTCTTAAAGGAT
TTATGCGAGTCTTCATTTGTGAGTGACACGTGGTTAGGTACAGTCGGTGA
TACCATGGTAACAACAGTTTGTGACACAAACATTTTATAgggtttttaat
gttttgtaaatttttatgtcaagaaaaggaaaaaagataacatCCTCAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018420TCONS_00018420Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018420-proteinTCONS_00018420-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000300supercontigsc0000300:177015..181214 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
82.98	82.25	121.56	129.01	33.25	25.47	28.61	32.86	36.58	28.86	29.68	30.6	25.9	29.53	32.61	37.84	34.88	38.77	13.98	12.23	24.94	24.39	45.84	39.7	21.98	36.46	19.26	16.89	26.23	29.83