XLOC_010177 (gene) - C. hemisphaerica

Overview
NameXLOC_010177
Unique NameXLOC_010177
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000290:61054..67473+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010177 ID=XLOC_010177|Name=XLOC_010177|organism=Clytia hemisphaerica|type=gene|length=6420bp|location=Sequence derived from alignment at sc0000290:61054..67473+ (Clytia hemisphaerica)
ACCAGAATTTTTCAGACACTATGCAAGTCATTTTAACACAACTGCTCCTA AAAATATATAGGTGTATACGATCGAGGCATCTTAGATTATCGCAAAGAAC AACAAAAGATTAAAATGGAAAGCCCAAAAAGAAACCGTTCAAGATCACGC TCTCCAATTCAAAGATCAAGATCCCCTCGCAGAGATGATAGACGTGGCAG AGACCGCAGAAGTGGAGGTGCTTCCATCAAAGGTACAAAAGGAAAGGAAT ACAGAGTTTATGTCAATAATCTCAATTTTCAAGTAAAATGGATGAATCTG AAAGACTTGATGAAGAAAGGTAGAAATTTTAGTTTACAAATGTGACAACC CTTGACAACCTGTGAAACAGAAAATTGAACTCTTANGAAATTTTAGTTTA CAAATATGACAACCCTTGACAACCTGTGAAACAGAAAATTGAACTCTTAA AACTTATAAACATGAaacaacttctttttttttcgttcgttcAACCAGGA AGTTTGAATCTTAGTTTGAGAGCTGTCAGCCTTTTTATTAGGTCATAAGC CTCAGAATTTTAACCATCCTCAATGTGTTGGCTGTATCAAATACTGTCAA AAAGGTTTTGTCAGATCGAACACTAGCAGTCTCTTTGATCTCTACAACCT GTTTAATTAAATAATATGCTGGGTATAATGTAAAGGAACTGTCATAATTC TGTGCTTGATCTGCCatgaaaaagttttaatttaagGGTGCATGAGAAAA GAATTACTCACCAGACAAGAAAAATTGCATATCccatgttttctttgttt tcttttagtTGGACCTGTTTCACatgttgaaattttcactgGTCAAGATG GAAAATCAAGAGGCTGTGGGTAAGCTCGGATAAATATAATCACATTTTGT TTGAAGCATTAAGGCTGTTGAGTTTAACCATATCCATTGgcttttcaatt cttcaaaatcaaacttCACTTTTGTGGCCTCTTGTGGCATCAATTTCAGC TTTTAACAATTTCGAACGAAGTGTGTTGTACATagtcttttatttgtttc attAACCAAAACCAATATTCACTTCTTCCTTCTTCCTTTGGAATACTTTT TTTCTTATCAATGTTATATCCTTTTTTCCACCAGTGTTGTGGAGTTTGAA CACGCAGATGATGCTGCAAAAGCTATTAAAGAATATGATGGAATTCAACA TGAAGGAAGGAAAATCCATGTCAGACAGGTATACTTCATAAATTTTGCTT TGAAGTTAGTTTATTCATCACTTATTATATTAGAGTTCCAATAAGTCAAG CATTTccaatttagaaaatgttttttattgatatCTAAATGCTGCTTGGC TTGATTCAggtttttagaatttagaagaaatttttcaaaaatgtctaTGT CATTTCTTTATTGCTTTGGATTATATATATCtttatttcctttttctttt actAGGATCAAGTGAATGACTCGCATTATGAAGAACAACTTCGGACtcag aaagaaaaaacaagaagagACCGTGATAGAGAAATGATGGGGCGTGGTGG TCCAATGCAACCCATGGGAGGACCTGGTGGTCTTCTTGGTGCACTTGGTA ACCTAGGTGGTGGTGGTATTGGTAATCTCAGTGCTGGCTTGATTCAAATG TTGAATGCTAAAAATGGTGATCCTATCAATGCAACTGTTTTCATCAGTAA TGTAagcttttcatttcatttatcttattgtcaaattttgtcagCGCATC CAGAAAATaataaggttttgttttttatttttccacaTGGAAAGTTTGTC CACTTATACTGAAAATCTAAGGGAAATGTATGAAATCTTTAGCTTGGAGG TATAATGTTATACTTTTCTCTACATTTCCATATTCAGCTGGACTATAACA TCAGATGGCAAGAATTGAAGGACCAACTGAGAAGAGCTGGAAATTGCAAA ACCTGTACCATTACAACagaagaagaaacaaagaaatcaaaaggatACGG ACAAGCTGTTTTTGAGAGTCCAATGGAGGCTTTGAATGCGATCGCAATGT TTAATGGGTTTGAAATGGGACGTGATAGAAGAGCAATCGTTATCCGATTG GTAAGTAAAGTTCAAGCTAAATTAATGATATCTTTCAATTAAAATGCTGA GagaaaattttacaatattTACCATAAAACTTTCTCTGGTCTTTATATAG GATCGACAAGCTCCACTCAATCAACTTTTACAACAAATTGGAATTACGGA AATCACTCAAAATACATTAGTACAATTCCAATCTATGGCATTGTTATCTC AACTCGGTGGTTTGCAAGGTATGAGATTTTCTCCGATTTTAGTCTTTAGT CTTCTCCTGTAGCAGCTGATGAATTCATGGTTGTAAATGTCTGTGATTTT CTTGCACGTTGAATGTTATTTGGCTGATGCAATGAAAACGAATTGGTCCG CTGAAAACGAAATGTTATTGGTtcgctgaaaaagaaaatgattatGTTAA CTttaattataaaaaagatttccatggcaatttttcaatcaatttaaaTA GTTTTGAGAATTTACATGCTTGTTTCCTTTCCAaagtttttgtttcaaaa ttgattttgttttctttgtgtGCGCATAAATCATAATTTGTTTGATTGTG AATGTGCAAatgttgttttcaaaaatcttgatttcttGTCTCATCATTGC ATATTTTGTTCATGTTGTTTATTTTGCAGGACTTAGTGCTTTAACAGGTG GTCTGACCGGTGGCTTGGGTGGTCTCGCTGGAGCACTTGGTGGTGCAGCC GGTGGACTTGGTGGTGCGGCCGGTGGACTTGGTAGTGCGGCACAAAACCT CCAGAACTATCAGAATCAAGGCAACTTAGGTGCTATCGGTAGTGGACAAA GTAGTTTATCTGCTAACAACCAACAGGGCTTAGGTGCTTTGTCAAGTTTG GGTTTAGGGAATCTCGGTGGCTTAGGAAATTTGTTGACTCAATCGCAACA AGGAGGTAGTTCGATGAATAGTGCACTTTCTAGTTTGGGAAATAACTTTG GTGCTTCATCAAATAGCCAATCTCAATATCAGCAACTTTCTTCGGGCTCA AATATCGGAGCCTCCAATTATACAGCTGGTCAACAACTTAGCAATTATTC CATAACTGGTGGTCGAGGTAGTAGCGGTGGTTTCGCAACTCAAGATTCAA GAAGATCATCTGATATCGGTAGTGGTTACGGTTATAATACAGGAAGTTCA AGCGGTGGTTCAGTAGCGAAAACAAGAGTATTTGTACGAAATGTAAGTAG AGTTGGCATGAGTGTCAGCTGgtatctgtttttgttccattcTTGGATGG GTGATTCTTTTATGACTTGATTGAGGAATCATTTTTTCGTTTGCTagtaa aattgattttcaaggTTTGTTCAAACCATAAGTAAGGTATCAATTTTGTG TCTGATAAATGTTCGATCAAATTCTGTCATAGTCTTTATGGAATCTGAAA CAAAGTGTTAAAATTTAATCGGGATTAGGTGATATCGTTACGATCGGCAA AGTTTTGTGTGGAAAAATGTGTGGTTCATATAGTTTTCTGGGTTTGGGAA GTatgattttgaccattttcctttGATTAGAGATGGAGATACAGTAGAAT CTCTTTATCCCGAAATTCAAAGGGACTGAAAAAATAGTTAGAGAGGTgag ttttcttttaataatttaCATAAAATAAGCATATTGACAAAGTTTGCCAA AGTTATAAAATAGCTTATTCATAAAAATTGCATGtttgatataattttca aaGTTCAAGAAGCATAGATACAAAGGGAATAAGGCTGCAAGCACATTCTA GAAACAAGTTGTTTGGTTAGAAATTTCTTTAGAGATTTGATATAGCAAGA AAAAATTGGCCAATGTATTTTTAATTGTGTGCGAGATCTAATGTTTTCTT CGTGATAGAGGGTTTCTACTGTATCAAAACTTTAAGTTTAAGGTCAAAAT ATTCATAGACGGGGATCAAAGgttgtgaaatatttttgtttgttgCAAGT CTGTTTGATAACATATTTTGAATCCATCATCCTTGAAGTGAACGGTGAGT ATTTGAAGACTTGGTAGAACCTGTTCttatcatattttccttttttcagc tTCCCTTCTCACTCAAATGGCAAGACTTGAAAGACCGATTTAGAGATGCA GGTATGGGTATCAATTTGCTACTGGAcattctttttatcatttttttaca gATCCTATTTAAAGCCATAAACCCGTCTAAACtctcgccccccccccctg agaaTCAATAGACTACACGTTACTTTTGAGAGGATTTCGTTTTCGGTTTC AATTTTTCCTTCAAACtttccatgtttttttttgtgtgcAACATTTTTCT ATATATACGGATAATTTGGAGCAATCGGAGTCCCTTTGTGAGCAAGGAAT CAAACTTTGAGCTACTTTAATTTCAACAAAAACCAAGATTCGTACACGAA AACCTACTAGTAGAATATATTTAGCAATCATTAAAACCTGTATGTTTCAT TGATAAGTCTCGGTGTACGAATTTTGAATTTAGTTGATTTACCTTTCTAT AGTGCGACTCCTCCTTTTTTAAGGGGGATCCAACTTTTCCACAAGTGCTT TATAGGGGGATAGGagattttccaaataaaatggggggtttgagaTTTAA GGATAACaacttttggtcaaaatatctatcatattttatattgatttaga tatttggttTGGGACAACTAAAAAACAAGTGTAGATAGCGCTGACTGCTG CTTTAAATAGCGCGGgctcgaaattttttttaaataggggGGATACAcat ataggggggggggggggaaataaAAATGGGGACTATGCACACTATGCCTT TCAACTTtaatatcatttttaatttcgtCAGGTCGTATTATTCGAGCAGA CATCAAACAAGACGACAATAATCGATCAAAGGGATGTGGAACAGTAACGT TCGAAACTGCTGACGAAGCTGTTAAAGCTATCTGTATCTTTTTCATGACC AACAGTTGTAATTGTATGGGATGCCCCCCTTATCTTATCCATTTTCTTGC TTTGACTGCGCTTTCTGCCTTCGTGTAAAATCTTTCTTAGAAAAGCTGGA GTTTTGATTTTCTGCAGCTTCAGAGACCTTTTCACTTCAAGTTCGTGGTT TTCTAAAATGCCCGGGAGGGGTCTTCCGGACAAAATGTCCTGGAAGACTA TGGGCATGTNTTCTAAAATGCCCGGGAGAGGTCTTCCGGACAAAATGTCC TGGAAGACTATGGGCATGTAATGTAATGAACGTTTTTCGATTTCTGGATT TCTTGGCTGAGAGGTAATACTTTTCCGATTTAATACTTGCTTGGCTGTGA GCCAAAAATATATTCTTTACCAGTTCAATTTTTCCTTAACTCTTATTCCG TAACCACTTCCAGCAATTTTCAACGGTATGCGTATTGACGGACGAGAAAT CGAAGTACGTATGGACCGCGTCGCTGGTGACCGTTAAAATGTGTAATCGT CGTAACGCCGTATTAACATAAGAACTTAAATCGTCTTAAAAATGTCTTTG TACTGAAAAACTGGACACCGAAATGAGAACGTTGAGATTTAGCTGTCTAT TCTTGGACTTAATTTAGTCTTCGCAAATTTGACGATCAATCTTGGCATCA AACGACAAAATGATATTGGTTGCGTGGTGTGAATAATATCGAAAGGATTC CAGACGGAATGGCCgcatttaattttattttatttttatgtctggttgtt tttatttgaaCATTCTTCCTCGATGGTTCTATATGGTTCGATCATCAACC GCATACCAAGAGGagactaccttaagtggataaattttggcggggattaa atttggggaattttgccaaaattcgccaaattaaatcctcgccaaaattt ccaaattcggcaattcgccatattaaatccccgccaaatttagcaAAAAG GGAATTATGtgaaaatcacaactttttagcatatttttgagtaattttca cccatttcaatgtgacaaaatttccagttcgccaaattaaatccccgcca aattttacgaaattgatctgtcgccaaattaaatccctgccaaaaatcgt atttaggccaatcgccaaattaaatccacgccaaaatttatccaattAAG GTAGAACTAATGATATCAATCACAGCGTTTCGAATTTCTAGTACTCAATT GTActttttatgagtttttgtgAACCTTGCTGTAAATATGAACCCCTTTT AATTCTACAAAGATAACGGGACTACATACGAAAGTGATTTTATGAAACTA AGCCTTCGTTCTTTTACCACCCTAAGTTTTTATTTGCGCACTAAATATAT GCAAACTGAAACATTCCGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018126TCONS_00018126Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018126-proteinTCONS_00018126-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000290supercontigsc0000290:61054..67473 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HNRNPMheterogeneous nuclear ribonucleoprotein M isoform b Homo Sapiens
MYEF2myelin expression factor 2 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
82.27 79.71 144.26 155.62 572.12 449.29 226.3 245.17 100.07 132.72 97.5 87.81 88.27 99.45 95.03 133.81 137.14 123.32 32.74 42.48 92 90.72 69.74 74.23 150.26 171.67 70.55 72.1 72.44 70.91