XLOC_010016 (gene) - C. hemisphaerica

Overview
NameXLOC_010016
Unique NameXLOC_010016
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000278:251631..257589-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010016 ID=XLOC_010016|Name=XLOC_010016|organism=Clytia hemisphaerica|type=gene|length=5959bp|location=Sequence derived from alignment at sc0000278:251631..257589- (Clytia hemisphaerica)
TAAATGATGAATTCAAGAACAGCAAACATTCAGAAAAAATTAAAGAATAC ATAAAGGTAAGAGTAAGGTTAGGTCATTTCCATCTTATTTCTCTACATCA TGGTAATTTTGCAAGTAATTTTATGTGCACTGGACTCTAAAGGTCGTTGT CCACTTCTTAGCTTTTATTGCATAAATTGGATAAATGGATCCTATAAGGC TTGACGCTGTGAACGCTTTTTTGAAAGTTGAAAACTTTGTGCGCAAAGCT GTACATCTCATCTATTGTAAACATACTAATTTTGTGTTTGTTTTCATCAT GTACAATTGTTTTCGAAAGAAATCAAAGTAAATCTAATTTTCAATGGAAG GAGAAAAGCACTCAGCGATCAAATCGCTTGAGTCGTGCGCGTTTATCTGC GACCAAAAAAGGTAAGTAGACAACAACTTCAAAAGAAAGACTGTAAATTC CATCTGCTACGAAAGCTACCATCTCATATCAGTAACATACTACGCAATCT CCTCTAGGCAAAACTGCCATGTTTACCATTTTAAAAAGAGACGGGCTTGT TTTTTTATATGGATGGTGACGGTTATTCACTTATTTGTTGTGTTACTTTT TTCATTTTTTTTTTGTTTTTTTCATTACTTTTTTTTTTCTTCTGATAGAG TTCAATAGAAGATAAAGAGAAGAGAGAGGAACTTTATTGAATTTTATTCT GATTGAGTTAAATAACATTGCTAAAATTATTTTATTTTAGATTGTATCAT CAGCAGAAAAACAAGACAACGGCAATATTCAGTCACATTTGAAAAAGCTT GTAAAACAATTCTTAAAAGAACAGCAAAAACCTAAGTTAGACACCTTTGT AAGTCAGATTCGTTTTTTGCTGAAATTGTTCTTTCTAGATATGGTATTGT CATCTTGTTATTGACAAAGCCTATNTGCTGAAGTTGTTCTTTCTAGATAT GGTATTGTCATCTTGTTATTGACAAAGCCTATAAGACTATGGGTGACTTT CAGACTTTAAACAAAAGAAAGCAACTTTTTCACATTTGAAAAATTCTTTT GATAATTCTACCGTCTCCCTTTCATATTCAAATAATAAAACATTTTACTT TGCAGATGTCAGTTCTCTTGGATGAAAGAGAGAAACAAAGATCTACCCAG CATGGAGGTGTTGAAGAGGGAAGCCAAGAAGCCATCCCGAAATCTACTAT GAAAAGGTTAGTATAATTCGTTGTTTCTCTACATAACATTGGCTACAGTT AAATACTGATTTTTTACTGACCAAAATGACTATATGGCTGAAAGAATGTT TTATTAAATTGGTCTACTTGTCAGAAAAAGAAGCAAAATATACCAAGAAA TAGTTTCACTGTTTGTCAGTAAAATACACATCCCTTTCAGGAATACAGGA GTACCATTGATAGGTCTTAAAAATCTGAGATTATTTGCAAAAATTGGCCA AATGCAATTGGTCGCTTGTGCTGTTGGTATTTTGCAGATCAGTATTTTCG CTAAAAGTGAAACTTGTACCATTTTGCTGAAATGGTGAATATCTAGCACT GGTCTAAATTTCAAGTCAATAGCATTTATCAATCCTTAATAAGCCGGCGT GTAAAATATTTATGTATGTGACAGATGGAAAATATTGAGACAGTGCCTAA AGTTTGTGCAAATAGAGCTACTACACAAAGTTTATGCAAAAAATATTAAA GTGGAAAAAAAGTTGAAAAAAGAAGGGGTTCTATCTATTTGTGTTGTAGC TACGCATTTCCTTATTTACACATTTTTATAAGGTTGCTTACAGCCCATTA ACAATTTATTAAGCGTCAATGATTTTTTTTTCACTCATTTATTTGTACGC ATCAATCGCAACTCTTTTTTGACATTTTGTTTTTGCTCAAGTCTATCTAG CTACTCAATATTACAATATATTATTTTACTGAAATCGATGAGAGAATCCA TCACATTACAAAATTGAAGTTTTCTATCTTTCTTATTTTTCTGCTTTTAT TTTGGTGTAAATTTCTAAATAAATTGCACGAGTCTGCAAAACCTTAGAAT CTTCTTTCTTGTTTTTACTTCCAGGAAACGAACTCGATTGATCTCACAAT CATCTTCTGAAGAAGGTGGAAGCGAAAGAAACTCTGGCAATATTTCATCT CAAACATCCAAAACGAAAGCTGTAAATAATGAGGATGATGATGATGAATC TCAATCTATGTCACGTGATGAAGGTCACACTAGAATATTGCGCTCAAGGC CTCAAAAGATCCAAGGTTATCAAAACAAAATCAGAAAACGCAACAGTCGA AGTTCGCCAAAACCCACAAATACTTTAGAATCCTCTAACCCATCAGACGC AAAAGAAACATCCAAAGAGATTGGTACTCAAAAAAGAACACTTGTAAATG ACGCTGATCAACAATTGATAGAGGAAAAGACTGCACGCAAAAATAGTTCT CATAAAAGATCTCTGCAAAGAAATGCGCTGCAAGAAATAGCAGGAACAGA TGTAATTGATGACAGATCACCTAAAAGATCTGCACAACTCATAAACAAAA TGGATAAGGAAGAGTCAAATCAGAAGGCTACCCAAAAATCACCCAAAATT CGTTCGTCGGAGGTTAATCATGATGAGGGAGATAAGTCTGATGATGATGA GGACCTAATCTCCCTACACCACCTCCAACAAAACCTCCAACAAAAAATCG CTTCAAGTCCATCGAATGGGCAAGTCAACCCGGTAAATCAAAAACAGGAT CATCAAAAGTCCTTAGAGGACAAGGTTGATGAGAATTCGTGTGATAGTTC TCTGAGAGGTGATCGACAACCAGTCACTGAAGATGTGGACATATTGTCAA ACTCTCTCATGAGTTCAAATACTACCCAGAAATCATCTGATGAGATGTCA CCCATCAGCGTCAGCCAGCAACACGTCACAGAAGAATCGAATTCAAGTTC TACACAAAGATTACTTGTTGAGGTCTCAAGTACTAGAACTCTCAGAAGTC GTCGGCTACAAGACGCAGAACAATTAAATGCTAAGCCTTCGCAGAATCCA CCCGAAAAACTTTCCTCGGTAACAAACGACGAAATTGATGACGATGATGA ACAAGAAATATTGCGAGAAATCGAAGACGAATTGAACTCTATTACTACAT CCATGTTTTCGAAAATGGGTGAACATTTCAATGAGGATCCACGGGATATC GAGGCCAGATTTAATGATGCAGCCAAAAGAATGTCGCCTTATATTAATGC ATCAGAAGAAAATGATGTTAATGCCTCAGCCGAAAATGATGATAAGAGAC AAAAGAAAAATGCACCAAATGGAAAACCAAAAGCAAAAAGGTAAAGAAAG AAAGAAAAAAAGGAACGCCATGTTTAATTCCATCTATATTTAATCATTCA TTAAATGTCCCTTGTTTTTTGTTGTTTTTACAATACCTAGATTGAAAGAT ATTTTCAAAACTTCTTTTTACTGGTCCAGCTGCAATGACTTCAACATACG AATTTTTTCTTTTTGTCAATTCTTCCGAAAAACCAGCCCATGTAAAAGTG ATGTAATGCTGAGCACTGATCTACATTTTTTGATTACAATGGGTATCAAA TTGAATGGATAATGCAACAAGTAATCAACTATTTTTTTTTTCAATATCAG TGATCAAACTAAACAGCGTCAAACAATGGCAGTGCAACCGATCACTTACA CCAGCAAACGAAAGTCTTTGTATGGTTCGCCAAAAAAACTCTTGCTTACA ACTTCCAACAACAAACCTTCATCACCCAAAAAGAAAAGACTTCAAAACAC ATCAACACTGGAGCTTTGTGATTCTCAAAAAGAAAGCCCTTCTCCGAAAT CTTCAACAAAATGTTCTGAGAGAGAAAGGTTTTTTTTTATTTCTTTGATA AATTTTTCTTTGAAACCCTGATTTTTAGATAATACCATCAATCTAGCAAC TCGTTAAAGAGAGCACGAATAATGCTAAATCATCAATGCAACGACTTCTT GGCGTCAGATCGGAACCAGTCCTCGCTCTTTTATGTAACTTGTTATTGCA ATCAATTACAGAATTCTCCTTATTGACTCTTTTTTTATATATATCCTTTG CTTGCTCTCAATAGAAACTCGTCAATCATAAAACGGAAAACGAATTGTTA CCATGGTGATCTGGATCATGCTCTCACACAAGATGAACAGGTATGACTTT ATCTGGTGTATGTTGTGGAAAATGAGGAACTGATTATCACTCGCCAACAC GAGTTCTCGTCAAAATTCTTCAAAACAGCCCCTCTTTAATTTTGACAAGA ACTGATTCAAAGTTTTCGTCAAAAGTGATTCTCATATGACAATCTATAGA TTCATCAGTAGTTATATCAACAAAAGTTGTTTAACAAAAGTTTTCCCCAT CTTTTTAAACTGTAAAACAGTTCAAAAGCTAAATGTAAACCCATGGAAAT TTAAAGCTAGATATTTTGCAATTCACAGGACACAGACGCTGGAAGAAATG CTACATCACGTAATCAAAATAATTCGCCAGTATCCCTAGCAAGAACATCA CGCAAACATGATAGATACGTATCATATACCCGATCACCCAACAAACGTAA ATCACAGCCGGAATCATCGCCAATATCAAGCAGGGGCGGAAGGTAAGTGG GCGATATTTCAATAACAACAGAACAGTTCCGCCCCGCTATTTTGCCTTTT CTTTATTGGTGGGATTGGAGTTCTTTTACCAAAAACGATATTTAGATGAT AGCTGATACAGTTATGTTTTTTCGTTTCTATAACTATTTTCTCTGTCTGG TCTGANAGATGATAGCTGATACAGTTATGTTTTTTCGTTTCTATAACTCT TTTCTCTGTCTGGCAAGAGTAATCTCTCTTTTTAAAAGTGTTAATTCTTT TCAATAATTTGGATCCATTACCACCAAATTTTTAAAATCTTCTCTCTAGA ACTGGTTCCCAACCCTCCAGCTCAAGGGAAGATGTAAACAACACTAGGAT GGAGAGACATGAAGAAATGCAAGAAGAGGGAGAATCAGTGCAATGGGACT CCATCGTTGTTAATGACGATGTTGATGATGATAATAATCGAAATAGAAGA GTCGGGAATAGAGGTTGGTGATTTTGCCTGTCTCTTTATTGTATGGGACC TGTTTTTAGAAATGAGTAAATTCAATAATATCAGTTGTCTCGGGTTTGGT CATCCTTTTTTAATACTGTTTTTCTATGTTTGTTAGGCTAAGTTTTTGTT TGAAGAAGAAAATTTAGAAAAGTTTGTATGAGGTATACAATGTAACCAAC GTCTTAAAATTCCTCCGGGAATGTAGCCTGGAGTATTAAAACTTGAGAGA AGACTTTCTAAAAAATCTACATATTGTCACTTTTTAGCATTGTAACCTGG AAATAACGTAAAAGAACTGTTAAAACATTTATTTTCCTTGTTTTCCCAAT TTAGATGTTACATTTAAAAAGAAGAGCGCGCGTGTGAAATTTCAAGCATA CGAAGAAAAGAGTCTAATCGCAGGTATCGAACGGTTTGGTGTTGGCGATT GGAATAACATTTTGAAACACTTCAAATTTCATGAATCAAGAACGAACGTT GCGCTCAAAGATAAATACAGGACTATGAAGAGACAAGGGTTGATACAATA ATGTTTTCGTATTATGTAATACACTTTGGACGTGGATGAGGATATTTTCA TCTTCATATGCTCATGAGAAGACAGAACCAGCCATTTAAAATCTCGTAAA GTTTAATCTTATGTCGCTTTTGTTTAGCTTCGATCATTCTTGAGTTTCTG ACTGACCTCTATCGAGTTCTTCTCATATTGGAATTTTTCTTAAATTTCTT GAATTTTCTTTTGTTACAAATTTATATAATTTTTTCCCATCATCAAAATT AAGAAGGTATATTGAATGTATATTGAATGTAAATGTAATGAAACTTGATA ATAAACTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017877TCONS_00017877Clytia hemisphaericatranscript
TCONS_00017876TCONS_00017876Clytia hemisphaericatranscript
TCONS_00017875TCONS_00017875Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017877-proteinTCONS_00017877-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000278supercontigsc0000278:251631..257589 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.91 4.81 2.22 1.76 9.99 7.03 9.32 12.13 7.93 10.47 14.69 11 8.76 8.95 4.87 6.2 5.27 6.3 2.44 2.71 3.89 3.8 4.36 4.2 19.14 22.29 3.05 2.5 2.18 1.91