XLOC_010008 (gene) - C. hemisphaerica

Overview
NameXLOC_010008
Unique NameXLOC_010008
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000278:199455..202971+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010008 ID=XLOC_010008|Name=XLOC_010008|organism=Clytia hemisphaerica|type=gene|length=3517bp|location=Sequence derived from alignment at sc0000278:199455..202971+ (Clytia hemisphaerica)
TAGATATGTCTGGATAGGTTCAACCAACATCCTCAGAAATATGATTCTTT
TGTCCGTCCTTAACTCATTAATCTGTTAAAGaattttcaatctttcaatt
aatttacactttcactttcagcaaGATCAAACAAATTAAGCAACAACAAA
GCCAAAGGAACAATAAGTTCTCATCGAAATGGGAAAATGTGTGACAGTGT
TTTGGGTCGTTTTGACCATACTTTTCACATTAGCAATTTGTTTTTCATTC
GTCTCGCCTgtttggtttcaaaacgaggctgaactCAAACAGGTGGTCGG
GCAATCGAGGCAAATCTCCAATCAGTATGATCCAGTCGCATTAGGAATGA
TACGATTCTGTCACCGTTATCAGCTATCACAGGCTATTCAGAAATGTGGA
TTTTTCACTAGCCTGAAAGACATGCCAAGTATAGCCTGGATGGTCAGTGC
AATTATTTATGCGATTGGATGTGTGTTTTTTATCGTATCTGTCATCATGG
CGTTCATATCAATTTGTACGAAAAGATCGATGAGCGATAAATTGAAAGTT
GCAACAGCATACATTCAAGTTATCGGAGGTCAGTAATCTATTGAATCAGG
AAGGCTCCAAAACTTTGAAAAGGGCTACGAACAATCGTGAATAATAAGGT
Caattcgggggggggggggtactacggaatttttttttcttgaaactaaa
aaattttctctaaaaacCGTGGGTTTTCCGGGGGGTTAATCATTTGAAGA
TTTCACTGGTTTTGTTAGAAAAATGCCCTTTTTAAATGATTTCCACACGC
TAGTTCATCACCTTTTGAGAATTTAAAACGTTGAAGAAAGTGCTTTTTCG
AAACCAAAATCATTCTCTCTAAcgatttaagaacattcttttaaaaacat
tacgaaaacatttttttttgcttaaatccaAAAAAGTTGTCTAGCGGAAT
TTTGGCTTGTTATCCGAGAGATTCAAAATGAGCAAAATGTTAAAGCTGAA
AGCTGAAAGGAATGGAGTTGTTCAACAATTTTAAGTTCATAATTTATTAA
TTCTAACATTCAAATATCTATTATCTTAAATATACAATTCTTAGAAATCT
TTACAAAAAAGATAGATAACATTAAAGGAGACTTACTAAGTGATGGTGTT
TCAACCCATTTGATGAACGAGCTTTTTCAGCCTCTCACATTATCGCCATC
TTATTACGTGAAAAGGAACACTTGCAACAAACATacattttctcttcttt
tctagTTGGATTCCTGGCTATCGCTGTACTCATCTTTCCGCTCGGGCTTG
ATTCCTCGTTCGCCCGTGACGTGTGCGGTCTAGAAGCAAAGATGTTTGTA
TCAGGTGAATGTCAAGTAGCTTGGGGATACGTTCTTGCTATCATGTCCGT
ATCCTTGACGATATTTTGTCCCATATTGGCAAAATATTCGACAGAGAATA
AAGAGACTTATCGACAGGGGATTGGGACTGGGACGTACTCGGAGTATGAT
TACCAAAAGAGTGAGGTCATCTCCTTGACAACCAGTAGTACAAGCACCAG
AAGTAAAGTCATGACGACTGTATAATAGTTGCCAAGACAGTTTCGGTGTC
GTTGGATATGGTTGGTAAGAAAGACTTAAGAACGGCCGAAGTCTTCAAGA
ATTTGGCGTTCTCTTTCGTGTAGCGAAATTTGGTTTGTCAAGTCAAGGAC
AATACACTGATCAACCCTGAAAGTATGGATAGTCTGAAGTCTGAGGTCGT
TGCATTGCATTGATTTTATGGTGGAGTTTTGATACCGTTTCGAAGAAAAG
ATACATTCTGTCAAGCCTAGGTCCTTTGTACCAAGCCAAGACTCTTGAAT
ACCAACTGAGTTGGTATCAAAAAGTGATATTAATGAACCTGCTCTATGGG
AGTTATCAAATGTAACAGAACTGACAAGAGTTGCTTCTGGTGTCtagttt
aaaaaatataaacatataTATGATATGAACTTTATTTTGCATATTGGACA
TGAGTCGAATATGAAATCCTCTGGTTCAATTATCGATAAAAAGTTTTGCT
TTCGGTTTCAGTAATTACTACAGTTTTAAGTAGACGAAAACTCGAGAGGC
AAGAACGAGCCAGAATAGTGTTTTTAAATATACTTTCTATTTTCCATTTA
GCTTGTTgctaaccctttaagtgccaatgtcgtatatatcagacatgggc
tatgtaggagggcgagattttaagccaaaaagtcaaaaaaatgcaaaaat
ttgacaaaaatccacttttttccgattttgaccgttttttgagcattttt
ggtcaacgagtgatccaagaacctccaaatttggccctcctttacttgat
tctgtcctccagcaaattaatttgaagttttaccactggtcacttttcta
tcattcaggcaggtccacGCAGCGTGGCACTTAAAGGAATAAATATAATA
TTCCTTTTGTTCTAGATAGCTTAAAATTTTACCATgtaaaaacttttatc
aaacgaaaaaagaaaaactaaatcaTTATTTAAGAACATCTTACAGTCGC
ACTTTCTTAAAACCTTAAATTTTCGCGGCTCCGAATAAATCAACTCGCCA
ATTTCGTTTAACTTGGTGGAATTCTTTTCGCCGATTgagaaaaactttaa
atttagCGAGAATTGATTTGGCAAATGAACAGAAACTCGAAACTTGGTAA
ATATGTTTGAGGAAATTCGCCGAATTTGCCAAATATTCTGTGAATTACTC
AATCCATGACGTAAGTAAAAGAATCAGGAAAGAAATATAAGATTGAACCG
ACATAGCGGGGAAAGCACATTAATTTTTAACGATTGAtccctggacattt
cgatttgTCACCCCATTTACCATAAAATTGACTAAATGCCAACAGACTCG
CGCAGGGACTTTTACAGGagtaatcgcacgatgggttattttttcttatt
tggcacgccctcaaagagagcaattaatcgttaatcacactctccaatgc
cgcgccaatgtttacaaaattgattttaatgtcttttgttacattttttt
tgcatcgaacgttttaattgcattcgaaatttattttgtgagaaagaaaa
tcaaaaaacaacactaaaagaaagacataaagagaagagaaaaagacaaa
actctcagtgtaatttctctaatttactTTCCTTACTGGGAAAAGTAGTG
ACAGTCATTGTGcaattagctcgtaatcacataataattcgtacaattcg
aaaattgcactcgtgatttttttgtttcaaattttcctcgtcctttcgga
ctcggaaaattaataacaaaaaaatcactcgtgcaattatattcgaattg
cactcgttatcatgtgattacatatactaatcgcacgatgggttattttt
tcttatttggcacgccctcaaagagagcaattaatcgttaatcacactct
tcaatgcggcgccaatgtttacaaaattgattttaatgttttttcttaca
ttctttttgcatcgaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017841TCONS_00017841Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017841-proteinTCONS_00017841-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000278supercontigsc0000278:199455..202971 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.88	0.54	1.63	1.75	4.64	3.75	9.61	9.69	5.86	6.05	5.82	5.58	6.24	5.92	2.76	3.8	16.71	13.53	6.46	6.93	29.16	30.5	13.39	17.12	16.37	13.89	18.88	9.7	4.16	3.42