XLOC_009935 (gene) - C. hemisphaerica

Overview
NameXLOC_009935
Unique NameXLOC_009935
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000274:243875..254091+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009935 ID=XLOC_009935|Name=XLOC_009935|organism=Clytia hemisphaerica|type=gene|length=10217bp|location=Sequence derived from alignment at sc0000274:243875..254091+ (Clytia hemisphaerica)
TTATTTGCGATCTACATTCCAAGAGTCTCACTTATTCACGATTTCTCTAT CGTTTCAGACATTTATTGGTGGCCGACAAACGTCAACGAGAAAGGAACAT CAAAGTAAATCGCACGCAGAAGAAATATTGTTGAAAAACTTATTAAAACA TATTAAAAGAGTAAATGATTACATTGGAAACGctggtcatcaaaattttt tgattgctGGAAGCAGGTTTACTGGTTTGGAAAGTACAGTATTTCGATAA TATATACAAGAGACTACCTTTAGAAACTGATATTTCAAGATGTGTTCAAG GAATTTCTTTATCCTGGCATCATGCATATTTTTGTCTATGGTTCATCAAA TGTCATCGGTTGAAGTTGATGCTACGAGCAATGGTAAGAAGATATTCTTG ATTTTCGGGACTGGGACCTAGGGGGTCTGCGCTAAAATAggttgtattca tgatatgtaccaCTGGAGAGCTTTCCaagaattttataaaatttcctccc aatacgtcacttaaaaattaggaaaagtgacgtattgggtggtacatttt aaaagttctcagaagactctccggtgatgcatatcatgaataaagacCTT TTTTTAACCATAACATTCAATTTCCAGGGTTTAGGGGCAATAAGCGTCTT CCATCCATCCCTTCATGATGTAAATTTTGTCAAGAAATTCTTTATAAAAG CTGGAGGTTTGATAggctggagtcgtttataatgcgtgtaatacattagt ataggcgttatatacgggatttgatttataaaattgttccctcccaTTAC TTTTTggtttatttctactatgtttgaatttttcgtctagcttgctagac tagcgGTTTAAAAGAAACGCACTATGAGGGCGATAAGAAAAACTGTCCTT TGAGTGGCGGAAAGAAAGAATTTTACTTTGGGCAGCAGTACACTGTCAAT TTTCGCATGAAACGATCTCGAAGAAAAACCGCAACACCACAAGCcactaa aaagtaaataaataggTTGTTGGAATGTTAATGAGAGTTGACCGCCGAAA TTAAATGGAATTTCCGTTAAGTGGTAAAGATCTCTGAATGTCGGCAGGCT TAATATGGTTTTGTCTACTGGATGGAAATAATCGATACATGTGCCACTAA TTGTAATGAAATTCTCAAGTGTGTTGGCTCGTGTTCCATTCATTTCTGTT CCCCCACAGATACCTTACGTCGTTTTATGGTTTTTCTTAGTCTAGCGAGc aagacgactaattcagacatagtataaataaagcaaaaaataatggaggg aacaaattttagtctATACTAATTATAAAttccgtaacaataatcgtatt atcatataacgcctatactactgtattacacgcattataaacgactccag tctaggttTTTCTTAGagcgtttttcaaacttttagaattaaaaatttct gaaatccTCAGTTTTCAATGCTCTGAGAATACACGAGAATCTACATTTAA TACCTCCTCCTCTAGgcagttttgaaatttttggtgttCACGTTTTTCAC AAGAGCATTTAAAATCTTTAAGCCCTCAGATGTTTTtattaaagtgttct taacttgttcttatgtttaccattttttagtatttttgaacgatttccta agaaatcgggtttttagagttcgcaaagccttaaaatgttcttaacatat tctcgatattttggtcatcgaagccttgtgttcttttatagtttattcct ataaaaaatattcccaaGTTACATCGATGAATTTCAGTGTCTCCTTGAAA TCCAAGTTTGATGTAGACTGGAGTGGTTTGAAATGCgcgtaatacagtag tataggcgttatatgataatacgattattgttacgggatttagtttgtat aaactaaaactaaaaattgttccctccattactttctGCTtcatttctac tatgtctgaattagtcgtctagcttgctagactaagtTTGATGAATCTAG GGAGATGACGTTTATGTTTCTAAAATAGGAACGAAAAAGCGCTCTAACTC GTACTTATATTCATGTACAATTGTGGTTACGTTGATGTTTTACGTATTTG TATGTCGCACGCACAGCAGTTAGACGTGAGGCATATTGTGTTCTTTTCTG ATTTAAGATTATAATTCTATTAGTGACTAAACAGTGGAATTAACTCTTGA CAGCTTTCCTTTATCCTTCGTCAATCAAAGAAGAGTATTTACGCctgatt tgattaaaaaattttaatcaaacGTTTAAAGCCGTAAGTAAAGGGGACAT TTAGTTAAGATTTCAAGAATTTCAGCCCTTTTAGTTCCCGGTTGTGCTTA AGTCTAATAGAAAAGTCTGGTAAAAaccagagttaaaactctaccattcT AACCTAAGTGAGAGCTTTTCCGTATCGTTTGTGTCCCTataaaatttcgt gggaaattcccttttttctcaaatattatgaccttaattgtggatttttg gcccagcgtgaaagtcatttaaaaaaagatgcTGTTCAAAAATCTGGCAT GCCACTATCTAACTTGTTCCTCctgactacacgttttttttataagaata tccaagaTTCATGAAGCTtttcaatgttcttaaatttttgagttttaagc ctaaaaatgttcttaacatgttcttattttcgccattttgtgagcatttt tgtccattttcttaagaaattggtcattttagagtctgcaaaatcttgaa attttcttaacatattcttgaTAATTTGGTCAttattgaagccttatgtt cttttatcgtttgttcttattaaaaaaaacgtgtactgtctTTCTTTCAA TGTGTTCAAAATTGTATCCGTGAGAACGTTGCATTCAACAGTatatctaa aattatacaagGGACTCATAAGTCCTCAAAAATTATAGCCATGGACtaaa aaaatagaagccttGCTTAAATCAGACTCCTACGCGCATTTCATACTCGA CTGCTTGACTGCATTGTTGATCCTTTCTGTTTATCCGCTCTTAATCTGGT ACCATTACCAAGGTTATCAAAAGACAAACTTTCATCTTTTGTATTGCTTT TAGATCAAATTATTAAACATACGGTTCTatttaaatgatattttttgaac TCCTTACTGGGTTATTGAATGATGTGTTATTCTAACGACTGAATGGACCA TTTTGTGAGTCAAATATagtcttttgattgactttTGTTTACAGTGGTAG CTCAACGTTGTTTGTGTCTGAGTAATGACAAGTATATATTTGCCATTATT TGAAATTATCTAAATTGTCTAGAATAAATGAAATATTGAGTCTAAGCCTG ACAAGATGAATTATGTTCAATAtaatcttatcttatcttatcctATCGAA AAGATTCCCCATTAGCCTTTGATCAGGGCTTATCAATGTCTAGCATGAAC TTTTTAAAACGATTTGTGGCCCATAAATCACTATTTATGTGCTCCTACAC ATCTTTTTATAAGgacaaaccatataagaacataaggcttcgatggtcaa aatgttaagaacaagctaagaacattttaagtctttgcggactctaaaac acccgatttcttaggaaaagggctaaaatgctcaaaaaatggtgaacata agaacatgttaagaacattcttagaCTTAATACTCAAAAGATCAAGAACg tcctaaggcttcaaaaattttggagtTCTTATATGTatatgaaagatatt ttattttAGACAAGCCCCCTTTTAACTGCTTTAATGACCAATCACAATTA AATTAGACTGCTGAATCATTGGAGAGGAGGCAGTTTCGAAGTTATTTATA TAATGTCTAATTTacgcgttttttttatataagaacatccaaaaattttg aaaccttcggatcTTCTTAActctttgaattttaagcctaaaaatgttct taatatgttcttattttcaccattttatgagcatttttgcctattttcct aagaaatcaggtgttttagagttcgcaaagccttaaaatgttcttaacat gttcttaagattttggccatcgaagccttatgttcttatatagtttgttc ttataaaaaaagcgtgtatttcaatcctgataaaatcaatttttcacaTG AACAAAATTGAATGCAAATCTAAATTAGGAAGCGCACCAATTATCTCTAG ACACAATCTTTTAATCATTAGACTGTAAACAACGAGTCGCGTCAAAAAGG GGTCATCGCACAGTCTATTTTTGTTGATGAGTCAAAGCCTAGCTGTGCCC TTTTTATGTATGCTTCTCTTTTTGCGATAAGATAAATTGAATAGATTTCA AAATAGCTCCACCTTCCTTGTTACCTTAGCAATTCGAATCTCAATTAAGA CGTGTTGAGCACAGCGCCCTACAAACGACGACCTCTTTTTAGTTTCTTGG TGTACACTTATCGTATTTGGAAAGTTTTATTTCTCAGGAGAAGTGAATAG AATTGCGAAACTTGATTAAACAATTTTTACACTTTTAACCCCAGCTTGGG TCATAaatattagaaaagaaataacaaaCGACCTTGAcctttaaaatgat tttgatatttttgccatcaaagccttatgttcttatatagtttgctcttg taaaaaagaaattgctgCACTCGTTTTCAGCAAGATAATCCTTAAAGACA ATTAAACAGTTTTGGATAATTGAAATATTTCAGGACTGAACTGATGCCAA AATTActtaaTGATATTtagaaacaaatttttaattgattcctcatacac gcttttttttttataagaatggtgtaaatccatttcatcatggatattct taacttttttgggaaaatcatcctaaaatattcttacagcactNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNtattcttaattttttggccattttcatcatgga cattcttataaagtgtattcttataaaaaaaaaagcgtgtaacctGATTC CTAAAATTTGTTTACCTAAAACTCATTTTTTGACCAAACAATCTTTTTTA CTTCAATCTATTATCTTGGAGTTGGACTTTCTATTTTGAAAGCATCTATA GATATTTTGAGAGGAGAAACATGGCTAGAGATTGAGCAATGGCTAATTTT GACCTAGGCCCCTTTGGGCTTTGAAGGCTCGAATAATCATTATCATTATC ACCACATCTTTCTTTACAGAGATCGATTTACGTCCGCAATGCAAAGATTC ACACGATTTATATTACGCCAATTGTTTTAACTTAAAGCGAGCAAAACTTT GTGACTtggagaaaaataaaatgagaTTTTACTGTCCCCTCACTTGTCGC CAGTGTAaaggtaagatttttttttaattttcagctgaggggaccaacca atattttagttcgatttacagaaagattcgaataatagaggttcgaatta tagagaattGACTGTAATACTTTCAAGGGACGGCGTAAAGATGGTAGGTA CATATGTGATTAACTTGACCAAAAACATGAGTAGAGAAAACACAAAACAC ACAgaattcgtgatattcatgacgtaatgtttcatACGGAAGCACCCCNA ACACACAGAGTTCATGATATTCATGGCGTAATGTTtcatacggaagcacc caaaaataGCCCGAGCGTTTGcctctacacgctttttttataagaatggt gtaaatccatttcatcatgaacattcttagcttttttgggaaaatcatcc taaaatattcttacagcacattcttaggttaggatcctaattcatactaa cttggggataattgataattgaaaatgctcttaaaatggcattcttagct ttagtagcaaaattccacgatggtgatattcttaccatattcttagtttt ttggtcaatttcatcatggacattcctataaagtgtattcttataaaaaa aaagcgtgtagttagattgtttaaattcaaaattagtaaTAAAAGCCCTG TTTTTTTGGGGTTCCCctcgtataaaacattacgtcataaacatCATGAA TTTTAAAGTTATGTATTTCTATCTTCTATAGGACCAATCGATGAGAATAG GGTGAGTAGGCCGCCTGTTGCTAAGTGTTTGTCTTCACGGTTCGGATGTT GCAACGATAACGAAACAGCTGCTCAAGGAAAAGACTTTCTCGGGTGCCCA GGTACGTAGGCTTccatatttccaaaaatttccaaattctgATAAATTAT CCACATACTTTTCCACAAGgtacttttaaattttgaaatgtgaGGATTAA ATAGTCGAATTAATCTCATTTTCATACTgagtttttctattttgattgaA TAAACATTAATACTACTTGTAAAAAATGGTATATTTCATTTCCTGGGTTT GCATCGAATGTTTGTCCTCCTacttaaaaaaagaataaagagTTGCCTTA AAAATTGACGGAATCTTCGACGTCATTAGAGGTTTAGGCACTACAAGACT TTTACCGTGAAAAATCTATATATATAATACATTTTCGAATCATTACAGAA CGATGTTTTGACACACCAAACTACAGTTGTGATTTCTTCCGGAAAATCGG ATTCTGTAACTTGGGATACTACAAAGAACAGATGTTATTGAGATGTCCTT TATCATGCAACTACTGTAAAAATGAGATCAAAGTGAACAAATGCCGTAAT CGCTGGGACGACGTGACATGCGAGCGTGCTGCCAAACACGGTTACTGTAC GGTATTGAAATACGAGAAACGACTCACGAAGAATTGTCGTAAATCTTGCG ACAAGTGTAAACGAAGCACAGCACCCGCTTTGCTATCGGTCGCTCGTGAA TGTTCGCATGAAGGAAATTGTTGTTGGGATCGCTCGAAACCTTTCAATGG TCGATGCCCAggtaaagaaaaaacatttgagTATAAAGTAGAGGTTTTCA GGTTTTACCAAAGTGACGTAACTTAGTTTTAAGGTGTTTGCCAACGTTTC GTAACTTAAGGAAAATCCACAAATATGGAAACAAGCATTCGAATTTTTAG AGGCGACTTTTTACGCAAATATCTCATGTTGAGAGAATTCTCTTGGATAA ATAAGCCCGGGGAGGGGCCaccaaaaaatggctttcaatattggatcctt acagtgcagcccttGAGTATTTAAAagatacccttacagtgcattttacc gaacgaTTCTGACCCTTATAGTgaagtttgatttcatatcttattttgcc gAAGCCGCCTGGAAATAAGCCTAAGATGTCGACCATATGTCGGACCATAT CAGTGCCCCTCCCCCCCTGGGTACATAAAGCAACATGATACCACCTATAA AGATCTATCGCTATATCATGGCTGAGTATTTTGGAATTTGTGGATATGAT GTATCAGTCGTGCTTTCAAAGCTATATTCAAATACCATTGTATGTTTCTT CCATTTTTAGACTGTGCTGATCGTTATTCGAaatcattttgcaaaatttt tgaccttgATTGTAAAGATACCAGTGGGATCAAGGGAGTTCAAATTCGAG TCATTTGTGCTCAAACTTGTGGCCTCTGTTCTGGTAAGATGCCATTTGTG TTACTtctattacacccctgtctcatatcGCCGATACAacttttcccaca gtggggataaaattttctattgaaaacccaatggggataaaaattctatc gttCCTAAGTCGAATCCGgtggagatggttttggagtgcaattttttaca ttgaattttgaatgtggatgaaatcaaagtcaattccccagtggggctgg ggtcccagcgggtctgtgacacatgggTGTTCTATTGATTTGAAACTTCA AAGCAGATGTTCTATGTTAGCTCTTCTAAAGTTAAATCATAGGGATTTTC GAATGATACGCTTATATTTTGTTCACATCAAAAAACACCTCTGTCTCACT CACAGCCTTAGAAATTTTCCCCAGAGAGGGTATAAAAAGTTCTatcgaaa ttccaatggggataagAATTCTATTGTCCCAAGCTGTGCAATTATTTTAT ATCGACTTTTAAATGGGGATGAGATAAAATTCAATTTCCCGTTCgggctg aaattttagggtatttttcccaccggggacagaATCTTGGACAaaatttc cagtggggctgggaccctagcgggtctgtgacacaggggtttaAAAAAGA TTGCGATTTCAGCGTTGGCGAGAGGATCGCATCTATAATCTACAatcatg gaaaaaaattataagaaaaaacaattccCAACTATTTATCCCCTTCCTCC CATTTGCTGCGACTGCAGTGCACACTGAACAAAATACAGCGCACAATTGT TAGGGGAAACGGGGGTAtatttctcaaatatttctatCCATGGTtacagt caatttttttttcgatttccacAGTTCCAAAGGAATGCATGGACGATTTG ATTTACGGAGAATTCTGCAACTCATGGAAGGAGCGTGGACAATGTTCAAA ACAACCGCTCATCATGAAAACATACTGTAAGAAAACATGTGGTTTCTGCA ACGACAgtagcaacaacaacaacaacaacaacaacaacaacgacaacaac aacaacaacaacaacaacaacaacaacaacaacaacaatgtTTCTAAAAA AACATAAATGGAATCATCACACATGAGGatgaagataatttttttaaatg gtaaCTCTAAATTGACTAGTGAAGTAAAACTGACAAGCGAAGTGAATCGC GGATACAGCATgacccaacctcgttccctgtgtatcatcagcttttttta tgtttactgatatcgctagataataccctggcattgtctgGTTATCGAAT GCGAAAGATTATGTAATTcgaaaacaaaacgtcagatttcatttgtaGCT GGATTTGAAACCCCACTGCATTGTGGTATAACTTagtaacgtcagatttt ttatGACGCATTGTTTTGAGAAATCCCCCCTCTGAGAGCGggactcgcat cagccaacaccagttctctggcgtctatcagtaatgtaaataaagcctga aaTACACGGTGGCGAGGATGCATCATGACCGTTTAATCGCCCTGGAAACT CCGTATATCGCTGATATTGGAATGACATTTTAGAGACAAAATAACTTAAC TATACTATAAACGAAAAACTCAAAAACGGGAAAAGAGGTTATCGAGATCT TAGAAGTTTTCGCTAAATGAAGACCTCGAATTTTGGAACGAAAAGGTTTT GCGTTCACCTCATTATTACTAACTATTTCTAACTTTTATAAATTTGTCAC TTTTCTAGTGATCAAAGGTAATTTCTGTGTAAATTAttccacaatttttt ttatatttaacgCAAGACATATTCCTAAACGATTTACCCCTCCGAAGGAG AAACCATGGTTAGAACGCCATTATGTTTGATTGATCTTCTGCAATACAGA GGCAAGACATAACTTCTTATCCCACGAAGGTGAAAGTCTTCTCCGTTGAG ATTTCGTTCATTGATCAAGTAGGTGATTTAACCGATTTAACTTATTCTAA TTTTGCCTAACATTTCTATATTTTCATAAttcatcaaaaaaagttttttt ttaaatccattttttgtTGTCAGGTTTCTTATTTATGATGTAAATATATT AGTGTAAATAAAACTCCCCTCCTTTCTCCATCCTTTTACAATAGATATCT AGATTTATTACAAGGCTTCATAGCCCAGGATCCACTTAAGGCTTATTTGT ATAGACTGCATGGCGTGTTGAGTGGCTTGTAGTACATAAAGGTAatccca cagatatctgtaaagcccgaagggctagatttgcggcttttatcgaaaag tgaagcctaggtttgga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017737TCONS_00017737Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017737-proteinTCONS_00017737-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000274supercontigsc0000274:243875..254091 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.82 0.78 0.49 0.35 1.03 0.83 0.87 0.77 0.63 1.19 0.79 0.59 44.36 36.76 2.01 1.45 1.32 1.23 136.28 170.4 1.02 1.16 2.61 3.1 1.6 2.08 1.03 1.04 9.08 10.38