XLOC_009849 (gene) - C. hemisphaerica

Overview
NameXLOC_009849
Unique NameXLOC_009849
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000271:32408..36627-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009849 ID=XLOC_009849|Name=XLOC_009849|organism=Clytia hemisphaerica|type=gene|length=4220bp|location=Sequence derived from alignment at sc0000271:32408..36627- (Clytia hemisphaerica)
GATAATTGGTTTTTGGAAAGTGGTGTATAATGTATAATTTATTTAATCCA
AAAGAAATTGACTTCAACTCAACCATATCAAAAGTTTGTCATAAAAAAAC
TGACAAATACTACCTAGAAACATCTAAAACGCATAAATTACTCATCGTCC
CTAAAACACCCTTTTTATCCACAGGTACAACGGTAAAAAAATAACAATTG
CCATCAAAAGTCTTTGTAAGTGAACAAGCTATTGGAAGTGGAAGAGCATC
AACTTCACCGATTCGCATCCAACGCCCTATATCAGAGGGCGGCTGGGCGT
AAATGTTATCTGAATGGTAAGCAAACAATAAATATACGCGTACGTTATCT
TGACAATTTTGTGAAAGTTCAGTGCAATTCCATTTCAAAACTACTGCCCC
TGATTCTACATCCGTCGTTAATTCGGTCAAAATATTCGGTAAGCGCGCTC
GCTGTGTCTCTTCNCGCGCCTGATTCTACATCTGTTGTTAATTCGGTCAA
AATATTCGGTAAGCGCGCTCGCTGTGTCTCTTCGTATGTCGGTGGTGGAC
GCCCATCGATATCAAGTAAACAAGGAATCGGAATTTTCGAAACAGAAACG
GGTTGCAATCGGGAAACGTCCTGGCTCGCTGGGAAATCATAATCTGATCT
CGACAGAGCTTTATTGTTTCTTAAATCATCGTTAGTTGGTAATCGATTAT
CCTGACTCTTTTGTTGATAGCGAATGATTTGTGCCGGATTTTTCTTGCTT
GAAGATACAGGTACTAATTTAAAGTTCTGTTGCTGTGCTTTCATATTAGG
ATCAGCAGACATTCTACGATCATGTACAGGCGTCAAAAGATGTCCTTCTG
TGACTTCATGTAGTGTCAAAGGTGGAGGGACTGGTATGGGGAGTTTCCTT
GATTTCGTTTTTGGTGATAACGGGCGTTCGGAGTGTAGTGATTTTTCCTG
AGGGCGTGTTTGAGGCGTAGTGTATGTCTCTTGTTTTGGTGTTGGTGAAT
GTATAACAATAGGTGTATCTGGTGTGGTCTGTAAAAGTTTGTTATTGTTT
GTGTCTTGTCTCCTTTGCTCAGACTGCCTCGGTGACAATTGCTGACGGAG
AGAAGGAGATTTCGGAGAAGATTGTATCAAGCGAGTCCTCTCCCCTGGGG
AAACTAAAATTCTCTCGGGTGGAATTCTTGGATTCCCATTTTGTTGTTTT
TGTCCTTGAGGAGCTAATAATTCCTCCTCGGGAATCCTAAGACTTTGGCG
AATAGTGTTTGTGTTTGCTGGTGAAACTGAACTTTCCTCAGGTGGGAATC
GAGCATGGGGATTTTTCCTTCGTGGGGAAATCAAAACTTCCTCCGATGGG
TATCGTGGATTTCCATTGCGGTATGGGTGCAAATATTCCACTGGTGCGCC
TTGTTGCATGTAACCAGGATCGAAGTTGAATCTGGCATTAGCTGCACCAT
TTGGTGAACGATGCATTTCAAGTCGTTGTAAATGTTCTTGTTGCTTTAAA
AATTCTTGTTCCCACTTCATACTAGCCAGTGCCATTTCTTCGTAAGCTTT
CGCTTTTTGTTTAGAAGACAGCCTTTTAAATTGAGGTGATTGTTGAAGTT
CAAAAGCGTGCCTTATTCGCATTTCTTCGAAGAAACGTTGATGCTGAGCT
GCAGTTGCTGGCACTCGATTATACCACGGCGGTTGGTACTCGTGCGGCCG
AACGACGTGCCGGGGCCGTGGACCACGATTCAAAGGTGGGCGACCAACAC
GTGGTTTACGTTTATGTTGAAATTCAGGGAATACTTCTGAATTGGCGGCT
CGCTTTGAGGGACCTCTCATTCTGTATCTCGGTGTATTGTCCATGGAAAC
ATTCGGGTTTATGGAAGTAATGGAGAAAGGTGGTTGCTGATTGACAGCTC
TGGTCAAAGGTTGGTATTGACTGACTGGTTCAATAAAAGCATGATTTTGA
TTGGATGCTTCTGCATAAGAACGATTGTGATTGGATGGCTCTAAAACTGG
TGGATTCCTATCGGCTGTTAAGTTTCTCTCTTTGTATTTTTCGACAATTT
GGTCGACTTTCCTTTCAGGTTCTGTTGTTAGTTGGTATGGTTTAACCTCC
ATTGTTGGCAATGATCGAAACATTGCCGGCACAAAATTATTATTCGCAGT
CTCCACAGATGCAGTGATGGATGATGTTGATGTAGAAATTCGAGGTGATA
ACATATCCTCAATCTCATTGGTCGATTCATTTGAAGCAATACCTTGATTG
GTTGGTTTAGCTAATGCGATATCATGGTCTCTAGGTGTTAATCTATCATC
TTTCTGATCAGCTGATCGAAAAAATGCACCGTTTTGATTGACCAGTTCTT
CATCTCTATGCTTCAAATCACCAACCTCTATGAAAGTTCCTTTATTTTCT
TTAGTAGTTGTTCCTTTATCAAAACGTTCGATTGTCATTGGTTTATCGCT
TATAGACAAAGTCTTTTCAACGCAACTTTCTTCAGTTGAACTGTCCTTAA
CCGTTATATTTATTTTCTCATCTATAACCAATTCATCACTGTTCTCAAGT
TCTATTTTTGTTTCTTCACGGCTCAGTGACGTCTCTACCACTTCAATAAC
GGTCGAATTATCGTCAGAGGGCGCCAGAGGTGTGATATCGTTTTCGTCAC
GCAAAGAGCTAGAAGAATTTGGTGAACAAGTTAGAGGTAGAATTTTATCT
TCAGCAAGGTCGATACGAGTTCGAGGAGAAATTGAAATCTCATCGCCCTC
GTTTTCACTCTCTTTTTGCTCATTTGTAGGAGCTTTTTCATCTCCAATTT
TCATTTTCTGAATTAACGAGCATTCTTCGGTGTTGGTGGATTTGTCAGTT
GACACCTGAAGAAGGGAATAGAGAAATTTGTTATAATTTCATTTCCTTTG
TCTGTTAATTGGGCCATTCCATTTTTTAGACTGATTTTAGTTTGTCCACC
GTCACGTTTAAGCTACGAAAAGAAATTTCCAACGTTTTCTTTACANTTGT
TGAAATTCAGGGAATACTTCTGAATTGGCGGCTCGCTTTGAGGGACCTCT
CATTCTGTATCTCGGTGTATTGTCCATGGAAACATTCGGGTTTATGGAAG
TAATGGAGAAAGGTGGTTGCTGATTGACAGCTCTGGTCAAAGGTTGGTAT
TGACTGACTGGTTCAATAAAAGCATGATTTTGATTGGATGCTTCTGCATA
AGAACGATTGTGATTGGATGGCTCTAAAACTGGTGGATTCCTATCGGCTG
TTAAGTTTCTCTCTTTGTATTTTTCGACAATTTGGTCGACTTTCCTTTCA
GGTTCTGTTGTTAGTTGGTATGGTTTAACCTCCATTGTTGGCAATGATCG
AAACATTGCCGGCACAAAATTATTATTCGCAGTCTCCACAGATGCAGTGA
TGGATGATGTTGATGTAGAAATTCGAGGTGATAACATATCCTCAATCTCA
TTGGTCGATTCATTTGAAGCAATACCTTGATTGGTTGGTTTAGCTAATGC
GATATCATGGTCTCTAGGTGTTAATCTATCATCTTTCTGATCAGCTGATC
GAAAAAATGCACCGTTTTGATTGACCAGTTCTTCATCTCTATGCTTCAAA
TCACCAACCTCTATGAAAGTTCCTTTATTTTCTTTAGTAGTTGTTCCTTT
ATCAAAACGTTCGATTGTCATTGGTTTATCGCTTATAGACAAAGTCTTTT
CTACGCAACTTTCTTCAGTTGAACTGTCCTTAACCGGTATATCTATTTTC
TCATCTATAACCAATTCATCACTGTTCTCAAGTTCTATTTTTGTTTCTTC
ACGGCTCAGTGACGTCTCTACCACTTCAATAACGGTCGAATTATCGTCAG
AGGGCGCCAGAGGTGTGATATCGTTTTCGTCACGCAAAGAGCTAGAAGAA
TTTGGTGAACAAGTTAGAGGTAGAATTTTATCTTCAGCAAGGTCGATACG
AGTTCGAGGAGAAATTGAAATCTCATCGCCCTCGTTTTCACTCTCTTTTT
GCTCATTTGTAGGAGCTTTTTCATCTCCAATTTTCATTTTCTGAATTAAC
GAGCATTCTTCGGTGTTGGTGGATTTGTCAGTTGACACCTGAAGAAGGGA
ATAGAGAAATTTGTTATAATTTCATTTCCTTTGTCTGTTAATTGGGCCAT
TCCATTTTTTAGACTGATTTTAGTTTGTCCACCGTCACGTTTAAGCTACG
AAAAGAAATTTCCAACGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017628TCONS_00017628Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:32408..36627 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0	0	0	0	0.04	0	0.05	0.06	0.08	0.09	0.1	0.45	0.13	0	0.04	0.17	0	0.04	0	0	0	0	0	0	0	0	0	0	0.09