XLOC_009399 (gene) - C. hemisphaerica

Overview
NameXLOC_009399
Unique NameXLOC_009399
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000252:110767..113180+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009399 ID=XLOC_009399|Name=XLOC_009399|organism=Clytia hemisphaerica|type=gene|length=2414bp|location=Sequence derived from alignment at sc0000252:110767..113180+ (Clytia hemisphaerica)
CAGCTTCTTCCGCTGCAATGCCGCTCACTTCAGGCGCTGTTTTCAACTCG
ACCACATTAACTACACCAGGTATGcgattaatatttcttttttttatagt
tCATTttataatctcatggttgattcaaattcgattgacgtcttttgctt
acgttaatttgtaattacTGTAATTACTTGTTGCactagggaaatttcaa
aatagacctcgggaaatttatcacGAATTTTCCTCATAActatgagatta
ctagtactaattcgCAAAAGTTATGGGTAGTTTTGAATACGACTCTTCGC
GTATATTCAATGGACTTCCCCAAAAATGTCGGGATGAATTAGATTATAAC
ATATTTTGTAGTGAAACTGAAAGGTATTTTTGGATCAAGGTCTCGCTAGG
AGCCTTGTATGAATTTAAAGGATTTTCATGTCTTGAATCTCAAAGTCCAG
CTATTTCCTTGGGATTTTACTCTGCTCATGACTTGATTCCAATTTAACAA
TAACTATCCTTTTGACAACTTAATAATAGACTTGCGAGAGTTTTAACCTT
GTGATAACCAACTCTGCTATTCTTTACGATCGTCAACTTTATAACAACAT
ACTTTCTcacttttaataaatatttcattatttagtatttttttataTTG
CTTATCGTTTTTAGCTGGGACGTTGCCACATCTAACTCCAAATCCTTTAA
CGCCTTGTATCTCTTAGTCATTTTCCATCGTATTGATTAACTTATCCCTA
TTCCATAGCCAGTAGCAGTAGTTACACTCCGGTCATTATTCTTTAAAGCA
ACTATCCCCTATTTGTTTAATTGATTTTAATTAGTTTTGAGTTTATTCTA
atgatattttatatatttactACTCCTGGACATTCTGCAATTCAAAGTCA
TACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTTAGTTGTTATCAATAGTTGTATCAATTTTGTAGTATTTTATAGCTTAA
TCTAAATTCAAACTTTGGTTTTACACCGGTCTTGCACAAGCCACTAGCAC
TACATTCACTCAGTCTACTTTTGCCAGGCTCATATTACTCTACAACGGTA
TTTGATCGAACGTACTTGGCTTTACCAACTTTTAGCCTTCTAGTCTCTAG
TTACAACCGGTCTCAGTATTTTAATAAACATCATATTTTGTATACGCTAC
ATATATATTTATCATACTCAATTTCCAGGTGAAGAGCCAATTGTAAAACT
TTGGAGATACTGTGAAATATAtcgtttttattattattattattataaaa
gttatttttgagatTACGCCTTTCTTATCAGTTCCTCAGAATTCACAGAC
GGTCATTTTCTCTAATAGATCATCTATTCTAATAGATCATCTATTCTGCA
CAtaccacgctctgctctaaagggaGGGATATGGCGAATGTTTGGATCTG
ACTTGGTTATTCagccaaaacaatcaaaaccgcGTTAccttttgcttgaa
aatgaaagaaaaagcgactgggttctaatattTATGATTGACGGTTGTTT
CCGGTGCGATCTGCTTGGAGGTTGAGATAAATGTCAACCGCGATTGAAGA
CCGTGACCCTAAGGGTCGCTAACCTGCCATTCTATTGACCCATTGGAGCC
GTTTAATTGTACTCTGTCCAAGAAGGGCGTAACGTTAAGAGTCTCTAGGC
AGTTTTCGGTCACTATGCTTCGTCTTAATTCCTCAAAAGCACTTGTTCTA
TATATTTCTTTGTTCTCTTGATTTACAGCCGCCAGATCGAATCGCCTTGC
CAGTAGCAAAAGCAACCAGAACGCACACATAACCACCTTTNCGAATCGTC
TTGCCAGTAGTAAAAGCAACCAGAACGCACACATTACCACCTTCGACGGC
CGTATTGACGTCAAAGCTATCCATTCGCCCTCACAAGTAGATGCTTTCGA
TTTCGACAACATGTATATCAGCTGTCTGGATATCGAGGATGGCTTACAAC
CAGGTATTTTTTCAAGTAACTGAGGGCTGAAGAAGTTGaggttctttttt
tttcttcattaagTTTAGATGCCAACCATAATTATGGGCTGAAATCTAAA
TCTAATGAGATCATAAGCggtaaatttcatttcattatttctGCTAATTA
TCGATTGTCGTTTTAGCTTAAATTGGAAACTTATGGAAGGTATTCGTTTT
TAACACGGCTACCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016788TCONS_00016788Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016788-proteinTCONS_00016788-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000252supercontigsc0000252:110767..113180 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.3	1.09	0.79	0.67	1.45	1.72	3.45	2.9	2.09	1.69	3.73	2.48	2.55	2.24	1.92	2.81	2.29	1.78	1.96	2.44	2.46	0.96	0.49	1.31	3.02	2.96	0.78	1.52	1.37	0.64