XLOC_009394 (gene) - C. hemisphaerica

Overview
NameXLOC_009394
Unique NameXLOC_009394
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000252:56013..62903+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009394 ID=XLOC_009394|Name=XLOC_009394|organism=Clytia hemisphaerica|type=gene|length=6891bp|location=Sequence derived from alignment at sc0000252:56013..62903+ (Clytia hemisphaerica)
GTGATGAAGAAGGAAGGCCTTCCTCTGGCGATTGTAAAAATGAGGAGGTT CGAGAATCAATCGATTTGGAAGATGGTGAAATTGTTGACGTTGACGAGAA ACGTAAAGCGAAACTTAAAACTATTGAAATAAATTCATCCAACCAATCGG AGAAGCGAGTAAATTCGTTGCTAGCAAGTCCCATTGATGGTACTTCgaag attttcaataaacacaatGATGACTTGATTGATGAAAACAAGACAGTAAG AAAAAACAACTCTCGCCAACGTCGCGGAGATAATGATTTTAAAAGCATAT CAACACTTAGAGAAAATTTGAAACTAGTTCGTGATTTCCTACTAGTAATC AGTCGAACCATACCAGAAAAACGCGCCACGATTTTATCTCTTGTTAAAAT CTTAATGCGTCGGTCACATCTGCAACAGCAAAACCTTGAAATGTCCATCT TCCTGTACAACTTGTTGAAAACTTTCACCGTAGGATCTTTGGATAACATT GATGAGTTACAATGGCAGGACTTACCGCTGATTCTCAAAAAAGATGAGAT TTTCAACGAGTTAGAAGAAGCGATCAATTTGAGAGCAGTCAAAAAGAAAG GGTGCTATGAATCGGCTGATGAATACATGGACGTCTACTTTCGTCTGCTG CGTGAAGATTGTTTCTACAATTTGAAGAAATCAATCAAACAACTGATCAA TGGTGAATTGGGTGAGTTTTATTTCAGGCTTAAATTATTGATGACACAAT TTTCTCAAACTTAAAAGAGGAGGGGCACTTAATTAAACAAATTACCTAGG GGACGAATTATGCCAAGAATTGGCAAAGGTAGCTCTCaacgaaattaaaa aattactgcttcaccaaaaaaagttactCAACCAATTTagaacttttaaa actttttactgCAAAATTAGCTTTCTTAAAGTATCTCGTTCCTTCCGTTT ACAAGCCAGAATTTCGAACAAATCTGTGGGTTGTagtaatttttctttgc aaaaataACGCAGAAGTTGAATAAACAATAGTTTATTGTAATGATTGCGA CTTAACCCCGTGTTAGAGAGGATATGAAAGATGAATGATTCTCTTGACCA ATGGATATTTTGATCGAGGATCGAGGACCTTTCTTAAAATTTGTGGCTTA AAAGATTGAAAAAGAACTGTCCAATGAACCAAAAAAACCCTTTGAAACTG ATGAAAGGAATGTAAAATGGCTCACTGTACTGGAGGAGTGAAATCACTGa tttgaataactttttttttcttttgggcTTTAGATATTCGAGATATGAAT GTCTATGAGAAGGTTTCATTATATGGAATCAACGTCGCTAAAGGTTCCGT TCAATTCGCATTGAAAATCTTCTCTGTCAAAGATGTCAAAGATTGGTCGA GATCGTCACATCTAAAATTCGGTGATTTGATGTGTCTTTCCACTGACGGG ACGTTCAAGCAACCATTCTGGGTGACAGTCACTAGTAAAGATCACATGCA GGAGAAAGGTGTGGTTTTGGTCCAACCTTGTGATGAATGGAACGATTTCA AAGGTGCTGAGTTTATAATCCATCTCATGAGATCTAGAGGTGAATATTTT GTTTATGTGTAGATTTGTTAGCGTTGCTGTTGTTCTCCGCCTTTTCTAGT ACTAATgcagtgttaaaagttcttccatCGCAGACTCAGATATCTGTCTC AGCGAAGTAACCGAGGCTTTTCCGTCTTGAAAATCTGCATGAtccagcaa aatttcaaatatgTGTGCTAGTTTGCTTTGTAAAATCAGCTTTCCGTCGA GAAGAAAAACTTTAACCATTGGCTAAATGGGAACTTTTTGCTTAAATCTT TACCATTTTCTAATAGATTTATTCAAGTAGAAATTAATACTCCGAAATTT TGCTTAATTACACAAAAAATAGACAGTCACAGCCCAAATCTTCAAAGTCA GGcaactaaattccaaaaaatcaacaacaataAACTTTGTTTATCTTCCT GTTTTTCTCAGGTCACATTTACATGGTGGAGTCACCGAACTATTACCGCT CCTATCAACCCGTCTTTAAAACATTGCAATCTCTCAATGTCAACCGCCTC AGTTTCAAGGAAGAACTCGTCAAGCTGGAGAAAGGACGACTACCTGATTT TCTGCACCCGTCACATACCATCGACTCCCGTCTTGTTTACCGGACTCCGA ACACGTCAGAACCACTGNAATCGACTCCCGTCTTGTTTACCGGACTCCGA CCATTCCGGACACGTCAGAACCACGTAAAGCAAAAGCAACCAGTAACTCT ACTATAAATCATGATTCACCCGAATCCAATAAACCAATCGTAGCCGTAAA TTCGCTATCCAGCTTGCCTCCCAATCAAACAGATTCAGCAACTAACCAAA TAAATGCAACAACGTCGTCTTTAGCAGTGACATCAAATTCAGTGACATCT GAAATAGCgatggcacaaaattggtcatcACCTACAACTCAAACTTCTTC ATTTATAATGAAACTTAAAAAAGATATAATTCTACCGCCAACACCACCAC AACTACCACCAACACAACTACCGTCACCAACACAACCACCACAAACACCA ACACCACCACCACGTGACTGTGCATTCACAATGCAGCGTGAAAATGAAAA GCACAAAATAACATTAGAAGACTTTTTCGATACCCCACACAGTGACGTGA AAAGCATTTTCGATCCTTCGCAAGAGGAGGCCGTCAAAACATGTCTCCAA AACCGAATTGGAATCATCCAGGGACCACCGGGTTGTGGGAAAACATTTAT CGGAGTACAAATGGTGCGTTTGCTACTGTCACTCTCTTCTCTGCACAAAC CAAAGATCTTTGTGTTGACTTACAAGAACCATGCGCTGGATGAATTTCTC AAAGGAATCTCTAAGTAAGTATCGTAGATGTGTAGGTAGACAACAGTAAA TCGAAAGTCCCGAAGGATCATTCTCTCTATAAAATCTAGCTGTTCACAAG AGTATTGGACACAATTTGATGATTTCccactttttaaacttttttggttC TCCAAGGCATATAGTTTGAGAAATAATGTTTTCTCCAGTCAGAACCACAA ACCTACATAAGAATGGCCGGATTCTTTTCTTCTTAGAAAGACGATCTTAC CGTGAGAAGACGTCAAATCTTCTCTGGGTCCCTCTGACTTTTATCCTGGC TATATTACCATCAAAGACgggatttttatttataagttgtttgataaacg ggatgcttttctttttttctatagTCTGAATGCCACACAAAGATAGCAAC TTGCCATAAtcgatattttttattcttcttttgttgGTGAACTTCTCAGG ATTGCTCGTTCTACGTTATTTTTTGAGGACTTGAAAGTTAAAGCCAAAGT TTTTATACAAAGAATGCGATAGTTCTCTTTTGGTAAATACGAAATATCAC TTTGATAAActattgtttctttcttttagaTATGTTGGTCTAAGTAAGNT TCTGATAAACTATTGTTTCTTTATGTATTTTAGATATGTTGGTCTAAGTA AACTGGTTCGCATTGGAGGAAGATGTAAAGACCCTGCATTGGAGAACATT ACTCTCAGAAAACTTCGTAAAGAAAATCAAACCGAAATTACTGAAATGGT ATTCAAAAATCGCTACGAAATGGATGAAAGCCGAGACACACTGCGAGcta cttttgaagaaattcgACAACTACCATACATCAGTTATGATCAACTATAT AGAAGCCTATCTGATGCACATGTGTATTCACTATTAATTGGTTTGGATTG GGATTCCTTGTCGAGTGAAGAGACTCACTGTGTAACATGGCAAGAAGTTG ACAATTTGTTGAGAGgagaaaactcaaaaagttttgaagataTCAAGTTT TTATATGAAATCAAAGATATAGCTTTTAATCATTGGCTTCCATCTCAAGA GGAATTCGATGATTGCGAATATAAACTTACCGGTAAGTCAAAATTTCATT GTTATCGGTGAGTTTGGTGAGTTTCCCAATGTATCACAACTATGAAGAAT CTCTCACAGACAGGCAGGGGTTTCAATTCCAGTCCCTTGAAAACTCAATA TTATTCGTTTCATTTTTTTAGGTGGCATTCAAAGCATTCAGACTTTTTCG AAATTGACGTTCAAGCAGCCAAGTGAGATtgacaaagtgaaaaaaaagaa aaaaggagaaaaagaagaagaaaatggggaaaaaatgaaaagtgaagAAG AGATCATGGAAGCTGAAGAAGAACAAATGATGTTCAGTGAACAGCGAAGG TtactttatatttctttttttgtgcATTCTGTGAACGAATCTTCTTCAAC CCAAAACCCAGTAGCATAGACTGGGGTGAGTGAACATTTGCTTAGGAGAA CAGATTTAAACGACACATTATGTTTTTATACCACGAATAAGTAAGTACTT TGtcgtaaaaatctgctctcctacgcagatcgatcttcacccctgtctac gctTCTGAAAAACTCCATATCGCAAACCCGGTAGGACCCCCTACCTTCCT GTAACGAAATCAGTAAGAAACCTCGTCTCCAGTGAGAAAAATATCCTGAA ATTTCACCCAAACTGGAAAAAAACTCATCCTCATTGTCATTTGTCCCCTT TATTTCACCCCATTGGTTAAGAAAGTCTCACCAGAccactgagacagggg tttatctttttttaaatctgagaGAGAGGACCTTAGTCGGAAACAAGCAA AAACCTTCCTTCAACCTTTGCATTATAACCAGTTTCTAGATTAACACTTC AAAATGTCAAGGAATGTGTTCTTCCTTCTTGAAACAAGACCAAATAATTG CTGAGTTTTCCCCGCCAAAAAATCGACTTCTAGTTTCCTATTCCCTCTTC TGACTTTATTAAAATAGTCTTTTGATGGATGTCTTCCCCAAAACTGATTA TGGGTTAATGTGAACGCCAAACTTAATTGATAAATGTCTCACTCTACTGT ACTCCTCTCCAACCAGGTGAAGgaatttggaaattaaatgttttttaaac aatagtTAAATCGTAGTTTAATTTTAAATCGTCTAAATCACTCATTCCGC CTGCGGTTACGACCACTTTGTCCCGCCTAACGAGTAGAGGCTTCTAATTT GTTTCCGCACGGTTTTGGCTATACTCTGAAAGCACAAACAAGGTTCAAGA TGGTGGTGTTCAAGTCTCAGAAAATTTTACCTCCCTCCCGCCTTACAGAT ACTGGTTGCCGGCAACCCTGTTCCTAGTTTATGTTAGTTTATCACTAGCA AGGGACtacattttccccaaaactgatTATGGGTTAGCCAAATATGTGAA CGCCAAACTTAAGTGAAAAATGTATCATTCTACTATACTCCCCTCCAACC AGATGaacgaatttggaaattaaatAGCATTTTAATTATCTTTGTTATAG GTCAGAATTCGTAAATGAAGAGTTCAACAGTATTCTAAAGGTCGATGATG GAAATAGTAATCACCAAGGAGAACAAAGAGTCAAAGGATTTTGTCCACAG GCCATCAAAAAGCTCACTGAAAATGGATATAATCTGCCTTACTTCGATGA GCAAGAGGACGTGTGGCAGTTGTCTATGCCAGATCGAATTCGATTGGTTC AACTTCTCATTGCCAAGGAAACAAACGAAATGTTGGAGAAATTTCAACGA AGTTTACGAGAATTCAAAGACAAATGCAAACAGAAAGCAGAGCTGGAAAC ACAAAATGAGGTCgagattttaaaaagaaaacaaattattGCTGCTACAG TAACTGGTGCCTCGATCAACCAAGAACTTTTAAGAGAAATTAAACCGCAA ATCGTCATTGTAGAAGAGGCAGCCGAGGTAGGAGTGCTTGACGAATGAAG TAGAACTTTGCCTTTAATTCAACGGAAATCTTTGTTATTTAAATCTCTGT CGTTTGTTTCAGGAGAATGTAATCGGCTATtagaatttacttttttttca agtgacTCAAAGTTAAGGAGGTTTGTTATACAAAATAACTATATGCCTAT TCTTTCTCTTCCCAAATAACTTCTTGAACTCCCCTCATTTTCCTTACAGG TACTGGAACCACAACTAGTGGCTTCGATTGGCTCGTGGACGAAATACATG CTTCTTATCGGTGATCACCAACAACTACGTCCATCCGTTGACGCCTACCA TTTACGTAAAGATTACAACTTTGACATCTCCATGATGGAAAGGTTGATTA ACAACCAAATGCCCTACACCACACTTCAAATGCAGAACCGGCAACGTGTC GAATTCGCCGAACTCCTTCTAGACATTTATCCTAACTTGAAGACCAACCA TAAACGAATCTCTGGACACAAACCAGCAACATGTTtggaaaaatcggttt tcttttGGGATCATCAACATGAAGAAACAAAAGAGCGAAGCGTGAGAAAT GAAGAAGAGGCGAAGAGAGCGGTCGATTTAGGTCTTTTCTTGGTTCAACA GGGCTATGAACCACGGAAAATCACAATTCTAGCTATGTATCGTGGCCAGA CAAAGTTGATCAGAGACACAATGAAGGAACACGTGAAACTATATTCTCAA CTTTTTTCATGTGACACCAGAATGAACAAGCTACAAACAGCAATGACAAC TCATGCAGATAACAGAAAATCGACTACTATTCCAGAATCCAAGCACAGCC GGAAACCGAAAGAGAAACCAGACGAGCCAAATGTCATTAAAATTCATACA GTAGATATGTATCAAGGTGACGAGAATGATTTTGTGATTGTATCCCTAGT CCGATCAAATCGGGAAAGAAATATCGGTTTCTTATCGGAACGCAATCGAA GATGTGTTGCTCAATCGCGCGCAAGATGTGGCGTTTATTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016781TCONS_00016781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016781-proteinTCONS_00016781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000252supercontigsc0000252:56013..62903 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.13 0.02 0.05 0.04 0.03 0.18 0.1 0.14 0.33 0.27 0.17 0.35 0.31 0.6 0.67 0.3 0.46 0.66 1.27 0.26 0.41 0.14 0.49 1.92 1.37 0.36 0.63 0.16 0.12